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Properties
| Property Name | Value |
|---|
| Product | lag1 and cln8 lipid-sensing domain containing protein |
| Orig transcript id | gnl|cribi|Naga_100148g12.7146.mrna |
| Orig protein id | gnl|cribi|Naga_100148g12.7146 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:707356..709643 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5733 ID=rna5733|Name=rna5733|organism=Nannochloropsis gaditana|type=mRNA|length=1464bp
CACCGGAAGCTCACTCATGAGGACAACGTATTCCACAGGGGACCTTTATT
CGGTCGAAGCACCATGCGCATAAGCCCGCCGCTCGTCTTGGCCCCGACTG
TGGGCATTTGGGCGCATCGACAGATCGAATTGCAGAGTAAAGAAAGACGT
GCATGCAAACAAGTGTCAAACCAGAACACGCAAGGCCTAGCCTTCCGCGC
CTCACACTTGACTGTGCCTCCACCACGCTTGCTGGCCTTAAGCGCAGTTG
CTCCCTCTGCTCCTGGCTCAAAACCTCAGGAAAGCACTCTCAAAAAGTTC
CTGGTCAGTGGCACCGTTGCCTGGATATACGAATTCGGCATCGGCCACTT
TTTAGAATTCGTCAAGGTCTTGAAGCAGACCAAACCTGGCACTTACTTCC
AGCTCGTGCGGGGAATCGTGAGCGAGAAGGGTATCACGGGCGTATGGGAC
GGCTTTTTTCCCTGGGGCTCGATCCAAGCCATCGCCAAGGGGGCGGTCTT
CGGCGGTGCTCACGCCTTGGCATTGGGACAGGTAGAGCCCATGGTGGAGA
GCGGAATTCTCAGTCCCTTGATAGCGCAAACAGTGGCGGGGGGGATAGGA
GGAGGCTTTCAAGGCTTGGTTCTGAGCCCTACGTTGCTATTGAAGACCCG
GGTCATGACCGATCCCATCTTCCGACAAAAAATGAGCGTGTGGGAAACAA
GCAAGCAATCCGCCCGCGTCGGGATGGTAGTCATTCAGAAAGAGGGCTTA
CCCGCCCTTATGAAAGGGAGCTTGACCTTCTCTTTAAAGCGCGTGGCTGA
TTGGGGCACTCGCTTCTACTTCGCCGTGCTTTCTGAAGACCTCTTTTTCC
GGCAAGGCGACGCCTCCCACGTCCTGACAAACCAGGAGAAGCTGGCCGCG
TCTCTGATCGGGGGGACGCTGTCGGCGTTTCTGACCCTCCCCCTGGACGT
GATGGTGGCGCAGATCCAGCAGGCCAGCAAGGCGGGGGAGAAGGTGTCGG
TATTGGAGACCTTCCAGTCCGAATTCCGGCAAGGGGGATGGGAGCGTGTG
GCGGGGTTTGCCACCAAAGGCTTTCTAGCCCGCACCCTGCATGTGGCTTT
GACGACAGCCTTAATGAAGACCTTGACGTCCGTGGTATATGAATGGGTCT
ATGGAGCCCCCCCCTCGTCGGCGAAGAAGCCTTAAACGCAGACGACGCAG
ATTCGAATGGGTAGTGGGAGGCAAGGCAAAGCGAACTTGCAATGCTGCCC
TATGCAGCCAGTTTTGTAAAGAAGGGTTCATCTAAAAATTGTGGGATCAG
TCAGATGGAGAAGGAACAATTTTGCACGAAAGGAGCTGGACTCGGCGCTG
AAGAGGGAGGGTGGAGGGAGCCTAGCAACATGACAAGGAGGGTTGGACTG
GTGAGAAGCAACGTAAGCAGCAACTGTGGCTCTTTTAAAAGAATCAAAGG
GTCCATTTGCAGCA back to topprotein sequence of rna5733 >rna5733-protein ID=rna5733-protein|Name=rna5733|organism=Nannochloropsis gaditana|type=polypeptide|length=332bp
MEQFLIYRPGQVFPELTSIPPSSLQEASSSFDNLAADMYQDMLSGLSRFY
TVESIDGEALFGIRLPLALAYGLLCTASFFGSGIVLGKVSATYRRLPKQA
RTDWDNRMVALGHAVIMSYRAFRYWIVLKPLFGHTFSLLSIAPALDMYEK
DTMRIMIGYMLYDLVVELATPAVYDYAVLFHHLAGILSHWHTLQTNDVAS
GWYTMLVYLAEGSTPILHTAWMMNTVGLSDGVAFKLLTLALLVTFFVVRI
LVSPLLAYTYLAPGNRHLYDGRDGVFYFQLFIVFAFAGLNYFWFYKLLTL
IYRKARGIKTPISSPVKKRSKPATEGSKSKKA back to topmRNA from alignment at CM002466.1:707356..709643- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5733 ID=rna5733|Name=rna5733|organism=Nannochloropsis gaditana|type=mRNA|length=2288bp|location=Sequence derived from alignment at CM002466.1:707356..709643- (Nannochloropsis gaditana)
ACCATGTATGGGACCGTCCACAACGAGATTCTGACAAAGTACACGTAAAT
AGCCCAGAATATTGGCAGTATCCACTGTCATGCCCAGCCATGTCCTCATT
ATTGTTATTTTGTCCTGTCGCCCTAGCAGCGCTGGGGCGTTCGTGCCCGA
AGCAACTTGAAGACTTGAAGCGGCGAAATTGAGGCTGGCAAATAGTATAC
TTCCCCCTTTCCGAGGGCGCCACAGAACGACAGGTGGATTTTCCATAATC
TCATCAAACGACCAAAAAGGCGATGGAAGATGGAACAATTTTTGATATAT
CGACCTGGCCAAGTCTTTCCTGAGCTTACCTCCATTCCTCCATCCTCCCT
CCAGGAGGCGAGCTCGTCTTTCGACAATTTGGCCGCAGATATGTACCAAG
ACATGTTGTCGGGTCTGTCCCGCTTTTACACGGTAGAATCGATCGATGGA
GAAGCTCTTTTTGGCATCCGATTGCCCTTAGCTCTGGCCTATGGCTTGTT
ATGCACCGCGTCTTTCTTCGGGAGCGGGATTGTGCTTGGGAAAGTCTCTG
CCACCTACCGGCGGTTGCCTAAACAGGCGCGTACGGACTGGGACAACCGC
ATGGTGGCCTTAGGTAAGCTTATATAATATAGTCACATTACATTTTTGTG
GTGCAATCTGTCCAGCAGGAGTTGTTGAGTGGGGCAAATGGTCATGTTGT
AGTGCTGACGTACCCTGTCAGTAGCGCGTGCATGACCTTGATGAAAATCA
TGAAACCCGGGTACCCACTAGCTTGCCACACACATATATATTATATTATA
CAAAGGCATTTGATAATCGATCTCCTGTTCTGAAATCCTTAGGACATGCT
GTCATTATGAGCTATCGCGCCTTTCGCTACTGGATCGTCTTGAAGCCCCT
TTTCGGGCACACTTTTTCCCTCCTCTCGATCGCCCCGGCCTTGGACATGT
ACGAAAAGGACACCATGCGGATCATGATAGGCTACATGCTCTATGACCTG
GTCGTTGAATTGGCTACACCCGCCGTCTACGACTACGCGGTCCTTTTCCA
TCACCTGGCCGGGATCCTCTCTCACTGGCACACCTTGCAGACCAACGACG
TGGCTTCAGGATGGTACACCATGCTCGTCTACCTTGCTGAGGGCTCCACG
CCAATCCTACACACGGCCTGGATGATGAACACGGTGGGGCTCTCGGACGG
TGTCGCTTTCAAGCTACTGACCCTCGCACTCCTGGTCACCTTTTTCGTCG
TCAGGATCCTCGTCTCCCCCTTGCTGGCCTATACTTACTTGGCGCCCGGC
AACCGTCATTTGTACGACGGTCGAGACGGTGTTTTCTACTTCCAGCTATT
CATCGTTTTCGCCTTCGCAGGCCTCAATTACTTCTGGTTCTACAAGCTGC
TGACCTTGATCTACCGGTACGTTTCCATCCGCACAACCTGTCTCTCTCCT
CCTTCTTCTCCTGTTAGCTGGTAGTTTCCCGTCTTTTCTCCACACCCTTT
TCACAACATGTTGAAAATTGACTCCGGATCCATGCCCTGCCCTCCTTTCG
ACAGCAAAGCCCGCGGGATCAAGACACCCATCAGCTCGCCCGTCAAGAAG
CGCAGCAAGCCCGCCACGGAGGGCAGCAAGTCGAAAAAAGCGTGATCGGA
CAATAGCCACATGCATTTTGAATCACCGTCCAACGGTTGAGAAACAAGGA
CGATGGATGAGAGGGGGCCTGGTAAAGCCTTCAAGGGAGCGAGTCTCATC
AAGAAGGGACAACAGATGCGTCCAATAGACTGTGCGGCTTGGTACGGCGG
GTGAAAAAAATGAATTTTGCTGCAAATGGACCCTTTGATTCTTTTAAAAG
AGCCACAGTTGCTGCTTACGTTGCTTCTCACCAGTCCAACCCTCCTTGTC
ATGTTGCTAGGCTCCCTCCACCCTCCCTCTTCAGCGCCGAGTCCAGCTCC
TTTCGTGCAAAATTGTTCCTTCTCCATCTGACTGATCCCACAATTTTTAG
ATGAACCCTTCTTTACAAAACTGGCTGCATAGGGCAGCATTGCAAGTTCG
CTTTGCCTTGCCTCCCACTACCCATTCGAATCTGCGTCGTCTGCGTTTAA
GGCTTCTTCGCCGACGAGGGGGGGGCTCCATAGACCCATTCATATACCAC
GGACGTCAAGGTCTTCATTAAGGCTGTCAAGATAGAAGAAAGTGAATGGG
GAAGGGCATTTAAGAATGTATGGGTGTGTTGGGGGGTTAAAAGGAAAGGT
CACAACAGGAGAAGACAACATCCAGGCGGGGAAGTGGA back to topCoding sequence (CDS) from alignment at CM002466.1:707356..709643- >rna5733 ID=rna5733|Name=rna5733|organism=Nannochloropsis gaditana|type=CDS|length=2997bp|location=Sequence derived from alignment at CM002466.1:707356..709643- (Nannochloropsis gaditana)
CAAAGCCCGCGGGATCAAGACACCCATCAGCTCGCCCGTCAAGAAGCGCA
GCAAGCCCGCCACGGAGGGCAGCAAGTCGAAAAAAGCGTGAGACATGCTG
TCATTATGAGCTATCGCGCCTTTCGCTACTGGATCGTCTTGAAGCCCCTT
TTCGGGCACACTTTTTCCCTCCTCTCGATCGCCCCGGCCTTGGACATGTA
CGAAAAGGACACCATGCGGATCATGATAGGCTACATGCTCTATGACCTGG
TCGTTGAATTGGCTACACCCGCCGTCTACGACTACGCGGTCCTTTTCCAT
CACCTGGCCGGGATCCTCTCTCACTGGCACACCTTGCAGACCAACGACGT
GGCTTCAGGATGGTACACCATGCTCGTCTACCTTGCTGAGGGCTCCACGC
CAATCCTACACACGGCCTGGATGATGAACACGGTGGGGCTCTCGGACGGT
GTCGCTTTCAAGCTACTGACCCTCGCACTCCTGGTCACCTTTTTCGTCGT
CAGGATCCTCGTCTCCCCCTTGCTGGCCTATACTTACTTGGCGCCCGGCA
ACCGTCATTTGTACGACGGTCGAGACGGTGTTTTCTACTTCCAGCTATTC
ATCGTTTTCGCCTTCGCAGGCCTCAATTACTTCTGGTTCTACAAGCTGCT
GACCTTGATCTACCGATGGAACAATTTTTGATATATCGACCTGGCCAAGT
CTTTCCTGAGCTTACCTCCATTCCTCCATCCTCCCTCCAGGAGGCGAGCT
CGTCTTTCGACAATTTGGCCGCAGATATGTACCAAGACATGTTGTCGGGT
CTGTCCCGCTTTTACACGGTAGAATCGATCGATGGAGAAGCTCTTTTTGG
CATCCGATTGCCCTTAGCTCTGGCCTATGGCTTGTTATGCACCGCGTCTT
TCTTCGGGAGCGGGATTGTGCTTGGGAAAGTCTCTGCCACCTACCGGCGG
TTGCCTAAACAGGCGCGTACGGACTGGGACAACCGCATGGTGGCCTTAGC
AAAGCCCGCGGGATCAAGACACCCATCAGCTCGCCCGTCAAGAAGCGCAG
CAAGCCCGCCACGGAGGGCAGCAAGTCGAAAAAAGCGTGAGACATGCTGT
CATTATGAGCTATCGCGCCTTTCGCTACTGGATCGTCTTGAAGCCCCTTT
TCGGGCACACTTTTTCCCTCCTCTCGATCGCCCCGGCCTTGGACATGTAC
GAAAAGGACACCATGCGGATCATGATAGGCTACATGCTCTATGACCTGGT
CGTTGAATTGGCTACACCCGCCGTCTACGACTACGCGGTCCTTTTCCATC
ACCTGGCCGGGATCCTCTCTCACTGGCACACCTTGCAGACCAACGACGTG
GCTTCAGGATGGTACACCATGCTCGTCTACCTTGCTGAGGGCTCCACGCC
AATCCTACACACGGCCTGGATGATGAACACGGTGGGGCTCTCGGACGGTG
TCGCTTTCAAGCTACTGACCCTCGCACTCCTGGTCACCTTTTTCGTCGTC
AGGATCCTCGTCTCCCCCTTGCTGGCCTATACTTACTTGGCGCCCGGCAA
CCGTCATTTGTACGACGGTCGAGACGGTGTTTTCTACTTCCAGCTATTCA
TCGTTTTCGCCTTCGCAGGCCTCAATTACTTCTGGTTCTACAAGCTGCTG
ACCTTGATCTACCGATGGAACAATTTTTGATATATCGACCTGGCCAAGTC
TTTCCTGAGCTTACCTCCATTCCTCCATCCTCCCTCCAGGAGGCGAGCTC
GTCTTTCGACAATTTGGCCGCAGATATGTACCAAGACATGTTGTCGGGTC
TGTCCCGCTTTTACACGGTAGAATCGATCGATGGAGAAGCTCTTTTTGGC
ATCCGATTGCCCTTAGCTCTGGCCTATGGCTTGTTATGCACCGCGTCTTT
CTTCGGGAGCGGGATTGTGCTTGGGAAAGTCTCTGCCACCTACCGGCGGT
TGCCTAAACAGGCGCGTACGGACTGGGACAACCGCATGGTGGCCTTAGCA
AAGCCCGCGGGATCAAGACACCCATCAGCTCGCCCGTCAAGAAGCGCAGC
AAGCCCGCCACGGAGGGCAGCAAGTCGAAAAAAGCGTGAGACATGCTGTC
ATTATGAGCTATCGCGCCTTTCGCTACTGGATCGTCTTGAAGCCCCTTTT
CGGGCACACTTTTTCCCTCCTCTCGATCGCCCCGGCCTTGGACATGTACG
AAAAGGACACCATGCGGATCATGATAGGCTACATGCTCTATGACCTGGTC
GTTGAATTGGCTACACCCGCCGTCTACGACTACGCGGTCCTTTTCCATCA
CCTGGCCGGGATCCTCTCTCACTGGCACACCTTGCAGACCAACGACGTGG
CTTCAGGATGGTACACCATGCTCGTCTACCTTGCTGAGGGCTCCACGCCA
ATCCTACACACGGCCTGGATGATGAACACGGTGGGGCTCTCGGACGGTGT
CGCTTTCAAGCTACTGACCCTCGCACTCCTGGTCACCTTTTTCGTCGTCA
GGATCCTCGTCTCCCCCTTGCTGGCCTATACTTACTTGGCGCCCGGCAAC
CGTCATTTGTACGACGGTCGAGACGGTGTTTTCTACTTCCAGCTATTCAT
CGTTTTCGCCTTCGCAGGCCTCAATTACTTCTGGTTCTACAAGCTGCTGA
CCTTGATCTACCGATGGAACAATTTTTGATATATCGACCTGGCCAAGTCT
TTCCTGAGCTTACCTCCATTCCTCCATCCTCCCTCCAGGAGGCGAGCTCG
TCTTTCGACAATTTGGCCGCAGATATGTACCAAGACATGTTGTCGGGTCT
GTCCCGCTTTTACACGGTAGAATCGATCGATGGAGAAGCTCTTTTTGGCA
TCCGATTGCCCTTAGCTCTGGCCTATGGCTTGTTATGCACCGCGTCTTTC
TTCGGGAGCGGGATTGTGCTTGGGAAAGTCTCTGCCACCTACCGGCGGTT
GCCTAAACAGGCGCGTACGGACTGGGACAACCGCATGGTGGCCTTAG back to top
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