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Properties
| Property Name | Value |
|---|
| Product | putative mitochondrial carrier family protein yhm2 |
| Orig transcript id | gnl|cribi|Naga_100148g11.7150.mrna |
| Orig protein id | gnl|cribi|Naga_100148g11.7150 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:705826..707826 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5732 ID=rna5732|Name=rna5732|organism=Nannochloropsis gaditana|type=mRNA|length=1482bp
CGCTACCGCTGCCAGAAGAAACGGAGTATTTCCACGTAGTAGAGACAATA
CCGCGTAAAAATTATGCGAGGAGGGGTAAAGTGTGGCATTGTGGCGGTTG
GGATAACTCGCGGAAGGCTGCGGGATCTGTGTCGACGCAATGACTCCACG
CGAGCGTTGCTTTCTGTTCACTGCTCTCTGACCTCCCCTCTGTTGCACGT
CCACAGGCGATGGACACAACACCAGATGTTCCATGACGGCCCCAGAGATA
AGGATAGGCTATCTGAAAACATGTCTAAACCTCCGGAGCACAGCGGGTCG
CAGTCCACGGTGCCGCCCAGTGATGCGACGGATGCGGATGACAGAGGGTG
TACGGAAGCAGGAGTGATACGGGCAGCCGTCCGAAGTAGTATCAATATTT
ACCGCAGCATTTTGTTCGGAAGCTTTCCCCGCAGAGTCCCTCTTAAAACT
GTATCCAAGATCACCGATCAGGTTTCTACAGCTTGGGACGCCTATTCTGT
CTTCAAAGGCTCGCACAAAGAGGCGACTCGAGACATCGAAGTGCAAAACC
GGCCGCAGCACAAGGAAAGTCTCGGGACCGCGGGTTTGCACAAAGCTCAA
TTATTTGGACAAACGCTACGAAGCGCTGTACCACACATGGTCAAAAGCGG
TTTTTTGGGGACGGCTGTTTTTGAAATGTACGAAACGAGCAAAGACACGC
TGGATAACGCATTGGGGTTGGACAAGGATGTGGACGGAGAGGCGTCGTTC
AGTACATCGCGCGACGTGTTCTCCCTCTCAATGATGGGAATCACAGGACT
AATCAGCGGCGGTCTCGCAGGCACATGCCACGGGCTATTATACGTTGGGT
GGGAGCATGCTCGACGCCTGATCAATGCGCAACACGTTGTTGCTAACGTG
TGGACGGGAACGGCCCTGGCTCACTCTTTGGCTCATGCATCCTTGTTCGG
TTCTTTTGAAGTTCTTAAGGATGCTTTGCTGGCAATTACGCACGCACGGC
ATGAGGAACCTTTGGGCGTGTTCGTCGTTGGGGCGGCGGGGGGGCTTGCA
GGCCTGGTTGAGGAGACGGTGTCGCATTTGACTCCCCACTGGGAGAAAGA
AGGCGTCTCAAGTTTGCGGGCAGCTTTCAAACGTAACGGCTTGCCACGAC
TTCGTGTCATCTCGTCGGCGGCCCTTCCGACAAGTCTAGGCTTCTTAGCG
TGGGAGTACGGACGACATCGGGTGTTGAGATGTGCAGGAGAAGAAGAGGG
GTAGCTCTGCCCGTGTGTATAGCCGACGATATTCACCAACCAAGAATGTC
ATACATGTGATGCTCACATAACAAAGCAAGAACGTAAGTACTTCAAGAGA
TTCGCTGAGCATCTCCTTCGTCCCCTCTTTCTGAGCACTTTATCTTCACA
CTTCTGTACACATGCTGTATTCAACTGTCATACATCTAACCGTGATCAAG
GACACATCGCAATCAATTGATGGTCTTCAATA back to topprotein sequence of rna5732 >rna5732-protein ID=rna5732-protein|Name=rna5732|organism=Nannochloropsis gaditana|type=polypeptide|length=373bp
MRISPPLVLAPTVGIWAHRQIELQSKERRACKQVSNQNTQGLAFRASHLT
VPPPRLLALSAVAPSAPGSKPQESTLKKFLVSGTVAWIYEFGIGHFLEFV
KVLKQTKPGTYFQLVRGIVSEKGITGVWDGFFPWGSIQAIAKGAVFGGAH
ALALGQVEPMVESGILSPLIAQTVAGGIGGGFQGLVLSPTLLLKTRVMTD
PIFRQKMSVWETSKQSARVGMVVIQKEGLPALMKGSLTFSLKRVADWGTR
FYFAVLSEDLFFRQGDASHVLTNQEKLAASLIGGTLSAFLTLPLDVMVAQ
IQQASKAGEKVSVLETFQSEFRQGGWERVAGFATKGFLARTLHVALTTAL
MKTLTSVVYEWVYGAPPSSAKKP back to topmRNA from alignment at CM002466.1:705826..707826+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5732 ID=rna5732|Name=rna5732|organism=Nannochloropsis gaditana|type=mRNA|length=2001bp|location=Sequence derived from alignment at CM002466.1:705826..707826+ (Nannochloropsis gaditana)
CACCGGAAGCTCACTCATGAGGACAACGTATTCCACAGGGGACCTTTATT
CGGTCGAAGCACCATGCGCATAAGCCCGCCGCTCGTCTTGGCCCCGACTG
TGGGCATTTGGGCGCATCGACAGATCGAATTGCAGAGTAAAGAAAGACGG
TATGTCGGCATTCCGCATTTGTACTTTTAGTGCGTTCCCTCGATTGTAGA
TCAACGTTTGTCATCCATACACGCGCGCAGTGCATGCAAACAAGTGTCAA
ACCAGAACACGCAAGGCCTAGCCTTCCGCGCCTCACACTTGACTgtgcct
ccaccacgcttGCTGGCCTTAAGCGCAGTTGCTCCCTCTGCTCCTGGCTC
AAAACCTCAGGAAAGCACTCTCAAAAAGGTAAGAAATAATCCGGCCCAGT
AGGTTGAACTACAGGTCAACAAATTGGTATTCATTGGCTGTTCGTAAGTG
ACGCATCGTGTCGCGGCATTCTCTCATGCGGATATAGAAGCATTAGTGCT
TTGCTATAAGCTCACTGATTGAATACTTCCACGGACACAAATTCCAACTC
CGTAGTTCCTGGTCAGTGGCACCGTTGCCTGGATATACGAATTCGGCATC
GGCCACTTTTTAGAATTCGTCAAGGTCTTGAAGCAGACCAAACCTGGCAC
TTACTTCCAGCTCGTGCGGGGAATCGTGAGCGAGAAGGGTATCACGGGCG
TATGGGACGGCTTTTTTCCCTGGGGCTCGATCCAAGCCATCGCCAAGGGG
GCGGTCTTCGGCGGTGCTCACGCCTTGGCATTGGGACAGGTAGAGCCCAT
GGTGGAGAGCGGAATTCTCAGTCCCTTGATAGCGCAAAcagtggcggggg
ggataggaggaggctttcaaGGCTTGGTTCTGAGCCCTACGTTGCTATTG
AAGGTAAGATTATGGAGAAGAGCGCCATGAAAATTCCATGGTCTGCGTGG
CGTGTCCGGGCCTGCACGCTTCCACTTGCCCGTCTGATGTACACATGCAT
TCCCCCGGCTGCGCAGACCCGGGTCATGACCGATCCCATCTTCCGACAAA
AAATGAGCGTGTGGGAAACAAGCAAGCAATCCGCCCGCGTCGGGATGGTA
GTCATTCAGAAAGAGGGCTTACCCGCCCTTATGAAAGGGAGCTTGACCTT
CTCTTTAAAGCGCGTGGCTGATTGGGGCACTCGCTTCTACTTCGCCGTGC
TTTCTGAAGACCTCTTTTTCCGGCAAGGCGACGCCTCCCACGTCCTGACA
AACCAGGAGAAGCTGGCCGCGTCTCTGATCGGGGGGACGCTGTCGGCGTT
TCTGACCCTCCCCCtggacgtgatggtggcGCAGATCCAGCAGGCCagca
aggcgggggagaaggtgtCGGTATTGGAGACCTTCCAGTCCGAATTCCGG
CAAGGGGGATGGGAGCGTGTGGCGGGGTTTGCCACCAAAGGCTTTCTAGC
CCGCACCCTGCATGTGGCTTTGACGACAGGTGAGGCACGAGTGGAGAAAA
GGACAAGAAATGGGGTGACACAACATTCTCTCCACTTCCCCGCCTGGATG
TTGTCTTCTCCTGTTGTGACCTTTCCTTTTAACCCCCCAACACACCCATA
CATTCTTAAATGCCCTTCCCCATTCACTTTCTTCTATCTTGACAGCCTTA
ATGAAGACCTTGACGTCCGTGGTATATGAATGGGTCTATggagccccccc
ctcgtcggcGAAGAAGCCTTAAACGCAGACGACGCAGATTCGAATGGGTA
GTGGGAGGCAAGGCAAAGCGAACTTGCAATGCTGCCCTATGCAGCCAGTT
TTGTAAAGAAGGGTTCATCTAAAAATTGTGGGATCAGTcagatggagaag
gaacaaTTTTGCACGAAAGGAGCTGGACTCGGCgctgaagagggagggtg
gagggagcctAGCAACATGACAAGGAGGGTTGGACTGGTGAGAAGCAACG
TAAGCAGCAACTGTGGCTCTTTTAAAAGAATCAAAGGGTCCATTTGCAGC
A back to topCoding sequence (CDS) from alignment at CM002466.1:705826..707826+ >rna5732 ID=rna5732|Name=rna5732|organism=Nannochloropsis gaditana|type=CDS|length=5610bp|location=Sequence derived from alignment at CM002466.1:705826..707826+ (Nannochloropsis gaditana)
ATGCGCATAAGCCCGCCGCTCGTCTTGGCCCCGACTGTGGGCATTTGGGC
GCATCGACAGATCGAATTGCAGAGTAAAGAAAGACGTGCATGCAAACAAG
TGTCAAACCAGAACACGCAAGGCCTAGCCTTCCGCGCCTCACACTTGACT
gtgcctccaccacgcttGCTGGCCTTAAGCGCAGTTGCTCCCTCTGCTCC
TGGCTCAAAACCTCAGGAAAGCACTCTCAAAAAGTTCCTGGTCAGTGGCA
CCGTTGCCTGGATATACGAATTCGGCATCGGCCACTTTTTAGAATTCGTC
AAGGTCTTGAAGCAGACCAAACCTGGCACTTACTTCCAGCTCGTGCGGGG
AATCGTGAGCGAGAAGGGTATCACGGGCGTATGGGACGGCTTTTTTCCCT
GGGGCTCGATCCAAGCCATCGCCAAGGGGGCGGTCTTCGGCGGTGCTCAC
GCCTTGGCATTGGGACAGGTAGAGCCCATGGTGGAGAGCGGAATTCTCAG
TCCCTTGATAGCGCAAAcagtggcgggggggataggaggaggctttcaaG
GCTTGGTTCTGAGCCCTACGTTGCTATTGAAGACCCGGGTCATGACCGAT
CCCATCTTCCGACAAAAAATGAGCGTGTGGGAAACAAGCAAGCAATCCGC
CCGCGTCGGGATGGTAGTCATTCAGAAAGAGGGCTTACCCGCCCTTATGA
AAGGGAGCTTGACCTTCTCTTTAAAGCGCGTGGCTGATTGGGGCACTCGC
TTCTACTTCGCCGTGCTTTCTGAAGACCTCTTTTTCCGGCAAGGCGACGC
CTCCCACGTCCTGACAAACCAGGAGAAGCTGGCCGCGTCTCTGATCGGGG
GGACGCTGTCGGCGTTTCTGACCCTCCCCCtggacgtgatggtggcGCAG
ATCCAGCAGGCCagcaaggcgggggagaaggtgtCGGTATTGGAGACCTT
CCAGTCCGAATTCCGGCAAGGGGGATGGGAGCGTGTGGCGGGGTTTGCCA
CCAAAGGCTTTCTAGCCCGCACCCTGCATGTGGCTTTGACGACAGCCTTA
ATGAAGACCTTGACGTCCGTGGTATATGAATGGGTCTATggagccccccc
ctcgtcggcGAAGAAGCCTTAAATGCGCATAAGCCCGCCGCTCGTCTTGG
CCCCGACTGTGGGCATTTGGGCGCATCGACAGATCGAATTGCAGAGTAAA
GAAAGACGTGCATGCAAACAAGTGTCAAACCAGAACACGCAAGGCCTAGC
CTTCCGCGCCTCACACTTGACTgtgcctccaccacgcttGCTGGCCTTAA
GCGCAGTTGCTCCCTCTGCTCCTGGCTCAAAACCTCAGGAAAGCACTCTC
AAAAAGTTCCTGGTCAGTGGCACCGTTGCCTGGATATACGAATTCGGCAT
CGGCCACTTTTTAGAATTCGTCAAGGTCTTGAAGCAGACCAAACCTGGCA
CTTACTTCCAGCTCGTGCGGGGAATCGTGAGCGAGAAGGGTATCACGGGC
GTATGGGACGGCTTTTTTCCCTGGGGCTCGATCCAAGCCATCGCCAAGGG
GGCGGTCTTCGGCGGTGCTCACGCCTTGGCATTGGGACAGGTAGAGCCCA
TGGTGGAGAGCGGAATTCTCAGTCCCTTGATAGCGCAAAcagtggcgggg
gggataggaggaggctttcaaGGCTTGGTTCTGAGCCCTACGTTGCTATT
GAAGACCCGGGTCATGACCGATCCCATCTTCCGACAAAAAATGAGCGTGT
GGGAAACAAGCAAGCAATCCGCCCGCGTCGGGATGGTAGTCATTCAGAAA
GAGGGCTTACCCGCCCTTATGAAAGGGAGCTTGACCTTCTCTTTAAAGCG
CGTGGCTGATTGGGGCACTCGCTTCTACTTCGCCGTGCTTTCTGAAGACC
TCTTTTTCCGGCAAGGCGACGCCTCCCACGTCCTGACAAACCAGGAGAAG
CTGGCCGCGTCTCTGATCGGGGGGACGCTGTCGGCGTTTCTGACCCTCCC
CCtggacgtgatggtggcGCAGATCCAGCAGGCCagcaaggcgggggaga
aggtgtCGGTATTGGAGACCTTCCAGTCCGAATTCCGGCAAGGGGGATGG
GAGCGTGTGGCGGGGTTTGCCACCAAAGGCTTTCTAGCCCGCACCCTGCA
TGTGGCTTTGACGACAGCCTTAATGAAGACCTTGACGTCCGTGGTATATG
AATGGGTCTATggagcccccccctcgtcggcGAAGAAGCCTTAAATGCGC
ATAAGCCCGCCGCTCGTCTTGGCCCCGACTGTGGGCATTTGGGCGCATCG
ACAGATCGAATTGCAGAGTAAAGAAAGACGTGCATGCAAACAAGTGTCAA
ACCAGAACACGCAAGGCCTAGCCTTCCGCGCCTCACACTTGACTgtgcct
ccaccacgcttGCTGGCCTTAAGCGCAGTTGCTCCCTCTGCTCCTGGCTC
AAAACCTCAGGAAAGCACTCTCAAAAAGTTCCTGGTCAGTGGCACCGTTG
CCTGGATATACGAATTCGGCATCGGCCACTTTTTAGAATTCGTCAAGGTC
TTGAAGCAGACCAAACCTGGCACTTACTTCCAGCTCGTGCGGGGAATCGT
GAGCGAGAAGGGTATCACGGGCGTATGGGACGGCTTTTTTCCCTGGGGCT
CGATCCAAGCCATCGCCAAGGGGGCGGTCTTCGGCGGTGCTCACGCCTTG
GCATTGGGACAGGTAGAGCCCATGGTGGAGAGCGGAATTCTCAGTCCCTT
GATAGCGCAAAcagtggcgggggggataggaggaggctttcaaGGCTTGG
TTCTGAGCCCTACGTTGCTATTGAAGACCCGGGTCATGACCGATCCCATC
TTCCGACAAAAAATGAGCGTGTGGGAAACAAGCAAGCAATCCGCCCGCGT
CGGGATGGTAGTCATTCAGAAAGAGGGCTTACCCGCCCTTATGAAAGGGA
GCTTGACCTTCTCTTTAAAGCGCGTGGCTGATTGGGGCACTCGCTTCTAC
TTCGCCGTGCTTTCTGAAGACCTCTTTTTCCGGCAAGGCGACGCCTCCCA
CGTCCTGACAAACCAGGAGAAGCTGGCCGCGTCTCTGATCGGGGGGACGC
TGTCGGCGTTTCTGACCCTCCCCCtggacgtgatggtggcGCAGATCCAG
CAGGCCagcaaggcgggggagaaggtgtCGGTATTGGAGACCTTCCAGTC
CGAATTCCGGCAAGGGGGATGGGAGCGTGTGGCGGGGTTTGCCACCAAAG
GCTTTCTAGCCCGCACCCTGCATGTGGCTTTGACGACAGCCTTAATGAAG
ACCTTGACGTCCGTGGTATATGAATGGGTCTATggagcccccccctcgtc
ggcGAAGAAGCCTTAAATGCGCATAAGCCCGCCGCTCGTCTTGGCCCCGA
CTGTGGGCATTTGGGCGCATCGACAGATCGAATTGCAGAGTAAAGAAAGA
CGTGCATGCAAACAAGTGTCAAACCAGAACACGCAAGGCCTAGCCTTCCG
CGCCTCACACTTGACTgtgcctccaccacgcttGCTGGCCTTAAGCGCAG
TTGCTCCCTCTGCTCCTGGCTCAAAACCTCAGGAAAGCACTCTCAAAAAG
TTCCTGGTCAGTGGCACCGTTGCCTGGATATACGAATTCGGCATCGGCCA
CTTTTTAGAATTCGTCAAGGTCTTGAAGCAGACCAAACCTGGCACTTACT
TCCAGCTCGTGCGGGGAATCGTGAGCGAGAAGGGTATCACGGGCGTATGG
GACGGCTTTTTTCCCTGGGGCTCGATCCAAGCCATCGCCAAGGGGGCGGT
CTTCGGCGGTGCTCACGCCTTGGCATTGGGACAGGTAGAGCCCATGGTGG
AGAGCGGAATTCTCAGTCCCTTGATAGCGCAAAcagtggcgggggggata
ggaggaggctttcaaGGCTTGGTTCTGAGCCCTACGTTGCTATTGAAGAC
CCGGGTCATGACCGATCCCATCTTCCGACAAAAAATGAGCGTGTGGGAAA
CAAGCAAGCAATCCGCCCGCGTCGGGATGGTAGTCATTCAGAAAGAGGGC
TTACCCGCCCTTATGAAAGGGAGCTTGACCTTCTCTTTAAAGCGCGTGGC
TGATTGGGGCACTCGCTTCTACTTCGCCGTGCTTTCTGAAGACCTCTTTT
TCCGGCAAGGCGACGCCTCCCACGTCCTGACAAACCAGGAGAAGCTGGCC
GCGTCTCTGATCGGGGGGACGCTGTCGGCGTTTCTGACCCTCCCCCtgga
cgtgatggtggcGCAGATCCAGCAGGCCagcaaggcgggggagaaggtgt
CGGTATTGGAGACCTTCCAGTCCGAATTCCGGCAAGGGGGATGGGAGCGT
GTGGCGGGGTTTGCCACCAAAGGCTTTCTAGCCCGCACCCTGCATGTGGC
TTTGACGACAGCCTTAATGAAGACCTTGACGTCCGTGGTATATGAATGGG
TCTATggagcccccccctcgtcggcGAAGAAGCCTTAAATGCGCATAAGC
CCGCCGCTCGTCTTGGCCCCGACTGTGGGCATTTGGGCGCATCGACAGAT
CGAATTGCAGAGTAAAGAAAGACGTGCATGCAAACAAGTGTCAAACCAGA
ACACGCAAGGCCTAGCCTTCCGCGCCTCACACTTGACTgtgcctccacca
cgcttGCTGGCCTTAAGCGCAGTTGCTCCCTCTGCTCCTGGCTCAAAACC
TCAGGAAAGCACTCTCAAAAAGTTCCTGGTCAGTGGCACCGTTGCCTGGA
TATACGAATTCGGCATCGGCCACTTTTTAGAATTCGTCAAGGTCTTGAAG
CAGACCAAACCTGGCACTTACTTCCAGCTCGTGCGGGGAATCGTGAGCGA
GAAGGGTATCACGGGCGTATGGGACGGCTTTTTTCCCTGGGGCTCGATCC
AAGCCATCGCCAAGGGGGCGGTCTTCGGCGGTGCTCACGCCTTGGCATTG
GGACAGGTAGAGCCCATGGTGGAGAGCGGAATTCTCAGTCCCTTGATAGC
GCAAAcagtggcgggggggataggaggaggctttcaaGGCTTGGTTCTGA
GCCCTACGTTGCTATTGAAGACCCGGGTCATGACCGATCCCATCTTCCGA
CAAAAAATGAGCGTGTGGGAAACAAGCAAGCAATCCGCCCGCGTCGGGAT
GGTAGTCATTCAGAAAGAGGGCTTACCCGCCCTTATGAAAGGGAGCTTGA
CCTTCTCTTTAAAGCGCGTGGCTGATTGGGGCACTCGCTTCTACTTCGCC
GTGCTTTCTGAAGACCTCTTTTTCCGGCAAGGCGACGCCTCCCACGTCCT
GACAAACCAGGAGAAGCTGGCCGCGTCTCTGATCGGGGGGACGCTGTCGG
CGTTTCTGACCCTCCCCCtggacgtgatggtggcGCAGATCCAGCAGGCC
agcaaggcgggggagaaggtgtCGGTATTGGAGACCTTCCAGTCCGAATT
CCGGCAAGGGGGATGGGAGCGTGTGGCGGGGTTTGCCACCAAAGGCTTTC
TAGCCCGCACCCTGCATGTGGCTTTGACGACAGCCTTAATGAAGACCTTG
ACGTCCGTGGTATATGAATGGGTCTATggagcccccccctcgtcggcGAA
GAAGCCTTAA back to top
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