EWM24958.1, cds5717 (CDS) Nannochloropsis gaditana

Overview
NameEWM24958.1
Unique Namecds5717
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:705889..705974 +
Alignment locationCM002466.1:706056..706203 +
Alignment locationCM002466.1:706381..706728 +
Alignment locationCM002466.1:706842..707304 +
Alignment locationCM002466.1:707471..707547 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24958.1
Productputative mitochondrial carrier family protein yhm2
Orig transcript idgnl|cribi|Naga_100148g11.7150.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:705889..705974 +
CM002466.1supercontigCM002466.1:706056..706203 +
CM002466.1supercontigCM002466.1:706381..706728 +
CM002466.1supercontigCM002466.1:706842..707304 +
CM002466.1supercontigCM002466.1:707471..707547 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom
Homology
BLAST of EWM24958.1 vs. NCBI_GenBank
Match: gi|585106589|gb|EWM24958.1| (putative mitochondrial carrier family protein yhm2 [Nannochloropsis gaditana])

HSP 1 Score: 747.658 bits (1929), Expect = 0.000e+0
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0
Query:    1 MRISPPLVLAPTVGIWAHRQIELQSKERRACKQVSNQNTQGLAFRASHLTVPPPRLLALSAVAPSAPGSKPQESTLKKFLVSGTVAWIYEFGIGHFLEFVKVLKQTKPGTYFQLVRGIVSEKGITGVWDGFFPWGSIQAIAKGAVFGGAHALALGQVEPMVESGILSPLIAQTVAGGIGGGFQGLVLSPTLLLKTRVMTDPIFRQKMSVWETSKQSARVGMVVIQKEGLPALMKGSLTFSLKRVADWGTRFYFAVLSEDLFFRQGDASHVLTNQEKLAASLIGGTLSAFLTLPLDVMVAQIQQASKAGEKVSVLETFQSEFRQGGWERVAGFATKGFLARTLHVALTTALMKTLTSVVYEWVYGAPPSSAKKP 373
            MRISPPLVLAPTVGIWAHRQIELQSKERRACKQVSNQNTQGLAFRASHLTVPPPRLLALSAVAPSAPGSKPQESTLKKFLVSGTVAWIYEFGIGHFLEFVKVLKQTKPGTYFQLVRGIVSEKGITGVWDGFFPWGSIQAIAKGAVFGGAHALALGQVEPMVESGILSPLIAQTVAGGIGGGFQGLVLSPTLLLKTRVMTDPIFRQKMSVWETSKQSARVGMVVIQKEGLPALMKGSLTFSLKRVADWGTRFYFAVLSEDLFFRQGDASHVLTNQEKLAASLIGGTLSAFLTLPLDVMVAQIQQASKAGEKVSVLETFQSEFRQGGWERVAGFATKGFLARTLHVALTTALMKTLTSVVYEWVYGAPPSSAKKP
Sbjct:    1 MRISPPLVLAPTVGIWAHRQIELQSKERRACKQVSNQNTQGLAFRASHLTVPPPRLLALSAVAPSAPGSKPQESTLKKFLVSGTVAWIYEFGIGHFLEFVKVLKQTKPGTYFQLVRGIVSEKGITGVWDGFFPWGSIQAIAKGAVFGGAHALALGQVEPMVESGILSPLIAQTVAGGIGGGFQGLVLSPTLLLKTRVMTDPIFRQKMSVWETSKQSARVGMVVIQKEGLPALMKGSLTFSLKRVADWGTRFYFAVLSEDLFFRQGDASHVLTNQEKLAASLIGGTLSAFLTLPLDVMVAQIQQASKAGEKVSVLETFQSEFRQGGWERVAGFATKGFLARTLHVALTTALMKTLTSVVYEWVYGAPPSSAKKP 373          
BLAST of EWM24958.1 vs. NCBI_GenBank
Match: gi|673016496|ref|XP_008862209.1| (hypothetical protein H310_00990 [Aphanomyces invadans] >gi|574481412|gb|ETW08404.1| hypothetical protein H310_00990 [Aphanomyces invadans])

HSP 1 Score: 351.288 bits (900), Expect = 5.521e-117
Identity = 182/311 (58.52%), Postives = 232/311 (74.60%), Query Frame = 0
Query:   50 TVPPPRLLALSAVAPSAPGSKPQESTLKKFLVSGTVAWIYEFGIGHFLEFVKVLKQTKP-GTYFQLVRGIVSEKGITGVWDGFFPWGSIQAIAKGAVFGGAHALALGQVEPMVESGILSPLIAQTVAGGIGGGFQGLVLSPTLLLKTRVMTDPIFRQKMSVWETSKQSARVGMVVIQKEGLPALMKGSLTFSLKRVADWGTRFYFAVLSEDLFFRQGDASHVLTNQEKLAASLIGGTLSAFLTLPLDVMVAQIQQASKAGEKVSVLETFQSEFRQGGWERVAGFATKGFLARTLHVALTTALMKTLTSVVY 359
            T  PP LL  +   P+ PG K Q   +K F+ +G V W YEF  GHFLEF+KV+KQT+   +Y +L R I   KGI G+WDGFFPWG++QA+AKG+VF    A +  Q+ P+V+ G LS  +A+ ++GG+GGG QG+VLSPTLLLKTRVMTDP+FR KMS WET  +S +VGM VI+ EG+PALMKGS+ FSLKRVADW TR++F VLSED+ +R+GD +  +T  E+LAASL+GGTLS   TLP+DVMVAQIQQASKAG  V +++TF++EF QGG +R+ GFA  GF+ R LHVA TT +MKT  S VY
Sbjct:    3 TSTPPVLLTTAVAPPALPGKKMQNPQVKFFIGAG-VGWTYEFAAGHFLEFIKVMKQTQSHKSYLELARDITRSKGIVGIWDGFFPWGTVQALAKGSVFSWGQAFSRAQLSPLVKQGYLSDRMAEIMSGGLGGGIQGIVLSPTLLLKTRVMTDPVFRTKMSGWETITKSGQVGMNVIRNEGVPALMKGSVVFSLKRVADWSTRYFFCVLSEDVMYRRGDPTRKITVSEELAASLVGGTLSCLATLPVDVMVAQIQQASKAGANVGIVDTFKNEFAQGGVKRLVGFAMGGFVPRCLHVAFTTMVMKTGCSAVY 312          
BLAST of EWM24958.1 vs. NCBI_GenBank
Match: gi|1173946359|gb|OQR94903.1| (Mitochondrial Carrier (MC) Family [Achlya hypogyna])

HSP 1 Score: 338.576 bits (867), Expect = 5.988e-112
Identity = 179/312 (57.37%), Postives = 226/312 (72.44%), Query Frame = 0
Query:   50 TVPPPRLLALSAVAPSAPGSKPQESTLKKFLVSGTVAWIYEFGIGHFLEFVKVLKQTK-PGTYFQLVRGIVSEKGITGVWDGFFPWGSIQAIAKGAVFGGAHALALGQVEPMVESGILSPLIAQTVAGGIGGGFQGLVLSPTLLLKTRVMTDPIFRQKMSVWETSKQSARVGMVVIQKEGLPALMKGSLTFSLKRVADWGTRFYFAVLSEDLFFRQGDASHVLTNQEKLAASLIGGTLSAFLTLPLDVMVAQIQQASKAGEKVSVLETFQSEFRQGGWERVAGFATKGFLARTLHVALTTALMKTLTSVVYE 360
            T P P  L L+A  P A G KPQ  T  KF++   VAW YE  +GHF EF+KV+KQT+   +Y QL R I   KGI G+WDGFFPWG++QA+AKG+VF    A A  Q+ P+V+ G LS   A+ ++GG GGG QG+ LSPTLLLKTRVMTDP+FR KMS WET K+S +VGM VI+ EG+ ALMKGS+ FSLKRVADW TR++F VL+E+  F++ D +  LT  E+LA+SLIGGTLS   TLP+DVMVAQIQQASKAG  V ++ TF+ E+ +GG +R+ GF+  GF+ R LH A TT +MKT  SVVY+
Sbjct:    4 TTPAP--LPLAAPKPVAMGKKPQNPT-AKFVIGAGVAWSYELALGHFFEFIKVMKQTQGHKSYLQLGREITKSKGIIGIWDGFFPWGTVQAVAKGSVFSWGQAFARMQMMPLVKQGHLSDRTAEIISGGFGGGVQGIFLSPTLLLKTRVMTDPVFRNKMSGWETCKKSGQVGMNVIRNEGIAALMKGSVVFSLKRVADWSTRYFFCVLTEEALFKREDPNKKLTVGEELASSLIGGTLSCIATLPVDVMVAQIQQASKAGANVGIISTFKDEYAKGGMKRLVGFSMAGFIPRCLHCAFTTMVMKTGCSVVYD 312          
BLAST of EWM24958.1 vs. NCBI_GenBank
Match: gi|698778009|ref|XP_009822048.1| (hypothetical protein H257_00847 [Aphanomyces astaci] >gi|574124173|gb|ETV89648.1| hypothetical protein H257_00847 [Aphanomyces astaci])

HSP 1 Score: 337.806 bits (865), Expect = 1.055e-111
Identity = 176/312 (56.41%), Postives = 228/312 (73.08%), Query Frame = 0
Query:   49 LTVPPPRLLALSAVAPSAPGSKPQESTLKKFLVSGTVAWIYEFGIGHFLEFVKVLKQTKP-GTYFQLVRGIVSEKGITGVWDGFFPWGSIQAIAKGAVFGGAHALALGQVEPMVESGILSPLIAQTVAGGIGGGFQGLVLSPTLLLKTRVMTDPIFRQKMSVWETSKQSARVGMVVIQKEGLPALMKGSLTFSLKRVADWGTRFYFAVLSEDLFFRQGDASHVLTNQEKLAASLIGGTLSAFLTLPLDVMVAQIQQASKAGEKVSVLETFQSEFRQGGWERVAGFATKGFLARTLHVALTTALMKTLTSVVY 359
            + +  P  L  + V P+AP  K Q   +K F+ +G V W YEF  GHFLEF+KV+KQT+   +Y +L R I   KGI G+WDGFFPWG++QA+AKG+VF    A +  Q+ P+V+ G +S   A+ ++GG+GGG QG+VLSPTLLLKTRVMTDP+FR KMS WET  +S +VGM VI+ EG+PALMKGS+ FSLKRVADW TR++F V+SED  +RQGD +  +T  E+LAASL+GGTLS   TLP+DVMVAQIQQASKAG  V ++ TF+ E+ +GG +R+ GF+  GF+ R LHVA TT +MKT  S VY
Sbjct:    1 MAMSSPVFLTTAGV-PAAPVKKMQNPQVKFFIGAG-VGWTYEFATGHFLEFIKVMKQTQSHKSYLELTRDITRAKGIIGIWDGFFPWGTVQALAKGSVFSWGQAFSRAQLSPLVKQGHISDRTAEIMSGGLGGGVQGIVLSPTLLLKTRVMTDPVFRTKMSGWETIVKSGKVGMNVIRNEGVPALMKGSMVFSLKRVADWSTRYFFCVVSEDYMYRQGDPNRKITVSEELAASLVGGTLSCLATLPVDVMVAQIQQASKAGANVGIVATFKDEYAKGGMKRLVGFSMGGFVPRCLHVAFTTMVMKTGCSAVY 310          
BLAST of EWM24958.1 vs. NCBI_GenBank
Match: gi|1173955960|gb|OQS02854.1| (Mitochondrial Carrier (MC) Family [Thraustotheca clavata])

HSP 1 Score: 331.643 bits (849), Expect = 2.466e-109
Identity = 171/305 (56.07%), Postives = 220/305 (72.13%), Query Frame = 0
Query:   58 ALSAVAPSAPGSKPQESTLKKFLVSGTVAWIYEFGIGHFLEFVKVLKQTK-PGTYFQLVRGIVSEKGITGVWDGFFPWGSIQAIAKGAVFGGAHALALGQVEPMVESGILSPLIAQTVAGGIGGGFQGLVLSPTLLLKTRVMTDPIFRQKMSVWETSKQSARVGMVVIQKEGLPALMKGSLTFSLKRVADWGTRFYFAVLSEDLFFRQGDASHVLTNQEKLAASLIGGTLSAFLTLPLDVMVAQIQQASKAGEKVSVLETFQSEFRQGGWERVAGFATKGFLARTLHVALTTALMKTLTSVVYEW 361
            +L  VA      KPQ  T  KF++   V W YE  +GHF EF+KV+KQT+   +Y +L R I   KGI GVWDGFFPWG++QA+AKG+VF    A A  Q+ P V+ G L    A+ ++GG GGG QG+ LSPTLLLKTRVMTDP+FR KM+ WET K+S +VGM VI+ EG+ ALMKGS+ FSLKRVADW TR++F V++ED  F++ + +  LT  E+L+ASLIGGTLS  +TLP+DVMVAQIQQASKAG  V ++ TF+ E+ +GG +R+AGF+  GF+ R LH A TT +MKT  SVVY+W
Sbjct:    5 SLPLVATPVITKKPQNPT-AKFVIGAGVCWSYELALGHFFEFIKVMKQTQGHKSYLELGREITKAKGIVGVWDGFFPWGTVQALAKGSVFSWGQAFARVQMVPFVKQGYLGDRTAEVISGGFGGGVQGIFLSPTLLLKTRVMTDPVFRNKMTGWETCKKSGQVGMNVIRNEGIAALMKGSIVFSLKRVADWSTRYFFCVVTEDALFKRNNPTKKLTVYEELSASLIGGTLSCLVTLPVDVMVAQIQQASKAGANVGIISTFKEEYAKGGLKRIAGFSMAGFVPRCLHCAFTTMVMKTGCSVVYDW 308          
BLAST of EWM24958.1 vs. NCBI_GenBank
Match: gi|669150922|ref|XP_008611023.1| (hypothetical protein SDRG_06986 [Saprolegnia diclina VS20] >gi|530737464|gb|EQC35706.1| hypothetical protein SDRG_06986 [Saprolegnia diclina VS20])

HSP 1 Score: 331.257 bits (848), Expect = 4.701e-109
Identity = 174/303 (57.43%), Postives = 219/303 (72.28%), Query Frame = 0
Query:   59 LSAVAPSAPGSKPQESTLKKFLVSGTVAWIYEFGIGHFLEFVKVLKQTK-PGTYFQLVRGIVSEKGITGVWDGFFPWGSIQAIAKGAVFGGAHALALGQVEPMVESGILSPLIAQTVAGGIGGGFQGLVLSPTLLLKTRVMTDPIFRQKMSVWETSKQSARVGMVVIQKEGLPALMKGSLTFSLKRVADWGTRFYFAVLSEDLFFRQGDASHVLTNQEKLAASLIGGTLSAFLTLPLDVMVAQIQQASKAGEKVSVLETFQSEFRQGGWERVAGFATKGFLARTLHVALTTALMKTLTSVVYE 360
            L+A  P A G KPQ  T  KF++   VAW YE  +GHF EF+KV+KQT+   +Y +L R I   KGI G+WDGFFPWG++QAIAKG+VF    A A  Q+ P+V+ G LS   A+ ++GG GGG QG+ LSPTLLLKTRVMTDP+FR KM+ WET K+S +VGM VI+ EG+ ALMKGS+ FSLKRVADW TR+ F VL+E+  F+  D    LT  E+LA+SLIGGTLS   TLP+DVMVAQIQQASKAG  V ++ TF+ E+ +GG +R+ GF+  GF+ R LH A TT +MKT  SVVY+
Sbjct:    9 LTAPKPLAVGKKPQNPT-AKFVIGAGVAWSYELALGHFFEFIKVMKQTQGHKSYLELGREITKAKGIYGIWDGFFPWGTVQAIAKGSVFSWGQAFARMQMVPLVKQGTLSDRTAEIISGGFGGGVQGIFLSPTLLLKTRVMTDPVFRNKMTGWETCKKSGQVGMNVIRHEGISALMKGSIVFSLKRVADWSTRYAFCVLTEEALFKGDDPKKKLTVTEELASSLIGGTLSCIATLPVDVMVAQIQQASKAGANVGIISTFKDEYAKGGMKRLVGFSMAGFIPRCLHCAFTTMVMKTGCSVVYD 310          
BLAST of EWM24958.1 vs. NCBI_GenBank
Match: gi|813198915|ref|XP_012209040.1| (hypothetical protein SPRG_14473 [Saprolegnia parasitica CBS 223.65] >gi|641525812|gb|KDO20227.1| hypothetical protein SPRG_14473 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 328.176 bits (840), Expect = 6.925e-108
Identity = 171/298 (57.38%), Postives = 215/298 (72.15%), Query Frame = 0
Query:   64 PSAPGSKPQESTLKKFLVSGTVAWIYEFGIGHFLEFVKVLKQTK-PGTYFQLVRGIVSEKGITGVWDGFFPWGSIQAIAKGAVFGGAHALALGQVEPMVESGILSPLIAQTVAGGIGGGFQGLVLSPTLLLKTRVMTDPIFRQKMSVWETSKQSARVGMVVIQKEGLPALMKGSLTFSLKRVADWGTRFYFAVLSEDLFFRQGDASHVLTNQEKLAASLIGGTLSAFLTLPLDVMVAQIQQASKAGEKVSVLETFQSEFRQGGWERVAGFATKGFLARTLHVALTTALMKTLTSVVYE 360
            P   G KPQ  T  KF++   VAW YE  +GHF EF+KV+KQT+   +Y +L R I   KGI G+WDGFFPWG++QAIAKG+VF    A A  Q+ P+V+ G LS   A+ ++GG GGG QG+ LSPTLLLKTRVMTDP+FR KM+ WET K+S +VGM VI+ EG+ ALMKGS+ FSLKRVADW TR+ F VL+E+  F+  D    LT  E+LA+SLIGGTLS   TLP+DVMVAQIQQASKAG  V ++ TF+ E+ +GG +R+ GF+  GF+ R LH A TT +MKT  SVVY+
Sbjct:   14 PLVAGKKPQNPT-AKFVIGAGVAWSYELALGHFFEFIKVMKQTQGHKSYLELGREITKAKGIYGIWDGFFPWGTVQAIAKGSVFSWGQAFARMQMVPLVKQGTLSDRTAEIISGGFGGGVQGIFLSPTLLLKTRVMTDPVFRNKMTGWETCKKSGQVGMNVIRHEGISALMKGSIVFSLKRVADWSTRYAFCVLTEEALFKGDDPKKKLTVTEELASSLIGGTLSCIATLPVDVMVAQIQQASKAGANVGIISTFKDEYAKGGMKRLVGFSMAGFIPRCLHCAFTTMVMKTGCSVVYD 310          
BLAST of EWM24958.1 vs. NCBI_GenBank
Match: gi|325181481|emb|CCA15915.1| (Mitochondrial Carrier (MC) Family putative [Albugo laibachii Nc14])

HSP 1 Score: 328.176 bits (840), Expect = 3.345e-107
Identity = 167/307 (54.40%), Postives = 221/307 (71.99%), Query Frame = 0
Query:   59 LSAVAPSAPGSKPQESTLK----KFLVSGTVAWIYEFGIGHFLEFVKVLKQTKPG-TYFQLVRGIVSEKGITGVWDGFFPWGSIQAIAKGAVFGGAHALALGQVEPMVESGILSPLIAQTVAGGIGGGFQGLVLSPTLLLKTRVMTDPIFRQKMSVWETSKQSARVGMVVIQKEGLPALMKGSLTFSLKRVADWGTRFYFAVLSEDLFFRQGDASHVLTNQEKLAASLIGGTLSAFLTLPLDVMVAQIQQASKAGEKVSVLETFQSEFRQGGWERVAGFATKGFLARTLHVALTTALMKTLTSVVYE 360
             +A+A  A  S+ Q   L+    K ++   V   +EF +GHF EF+K++KQT P  +Y QL++ I+  KGI G+WDGF PWG+IQ+IAKG+VF   HA+    + P  E G +S    + +AGG GGGFQGLVLSPTLLLKTRVMTDPIFR +M+  ET K+S  +GM VIQ EG+ ALMKGS  FS+KRVADW TRF+F+V+ E+  +++ D +  LTN +K+ ASL+GG LS+  T+P+DVMVAQIQQASKAG +VS++ET + + RQGG  +VAGFAT G + R  HV+LTT +MKT TS+VYE
Sbjct:   54 FAALACRARSSQRQHEPLENPQVKLVIGAGVTLAFEFAVGHFFEFIKIMKQTNPHRSYAQLMKDIIHSKGILGIWDGFVPWGAIQSIAKGSVFSWGHAVTKKTLIPYAEDGRISIQAIEIIAGGAGGGFQGLVLSPTLLLKTRVMTDPIFRNRMTALETCKKSLSIGMKVIQNEGIGALMKGSAVFSMKRVADWSTRFFFSVMCEEYLYKRDDPNRKLTNGQKVTASLLGGVLSSISTIPIDVMVAQIQQASKAGTRVSIIETMREQIRQGGIRQVAGFATSGLMVRVAHVSLTTVIMKTATSIVYE 360          
BLAST of EWM24958.1 vs. NCBI_GenBank
Match: gi|301107291|ref|XP_002902728.1| (Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4] >gi|262098602|gb|EEY56654.1| Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4])

HSP 1 Score: 320.857 bits (821), Expect = 1.124e-104
Identity = 178/331 (53.78%), Postives = 233/331 (70.39%), Query Frame = 0
Query:   36 NQNTQGLAFRASHLTVPPP-RLLALSAVAPSAPGSKPQESTLKKFLVSGTVAWIYEFGIGHFLEFVKVLKQTKPG-TYFQLVRGIVSEKGITGVWDGFFPWGSIQAIAKGAVFGGAHALALGQVEPMVESGILSPLIAQTVAGGIGGGFQGLVLSPTLLLKTRVMTDPIFRQKMSVWETSKQSARVGMVVIQKEGLPALMKGSLTFSLKRVADWGTRFYFAVLSEDLFFRQGDASHVLTNQEKLAASLIGGTLSAFLTLPLDVMVAQIQQASKAGEKVSVLETFQSEFRQGGWERVAGFATKGFLARTLHVALTTALMKTLTSVVYEWVYG 364
             +N Q  AF    L+ P   R LALSA +   P     E    K LV   V   YEF +GH+LEF+K++KQT+P  +Y  L + I+  KG+ GVWDGFFPWG++Q +AKG+VF   H++A   + PMV++  +S   A+ +AGGIGGGFQG VLSPTLLLKTRVMTDPIFR++M+  ET  +S R+G+ VIQKEG+ ALMKGS  FS+KRVADW +RF+F+V +E++ +++ D   VLT  E++ +SLIGG  SA LTLP+DV+VAQIQQASKAG KV V+E F+ ++R GG  +V  F T GFLAR LH + TT +MKT TSVVY+ V G
Sbjct:   17 QKNRQAGAFHPLMLSGPHAYRPLALSAKSEHKP-----ERAGVKLLVGAGVCLAYEFALGHYLEFIKIMKQTRPQFSYVHLTKEIMHAKGVVGVWDGFFPWGALQGVAKGSVFAWGHSVARTSLNPMVKTDKISKGTAEVIAGGIGGGFQGFVLSPTLLLKTRVMTDPIFREQMTPLETMSRSMRIGLKVIQKEGVAALMKGSGMFSVKRVADWSSRFFFSVQAENIVYKRNDPDRVLTTSEQVFSSLIGGVFSAALTLPMDVLVAQIQQASKAGVKVPVVELFRQQYRAGGLNQVLAFGTTGFLARLLHASFTTMIMKTATSVVYDMVEG 342          
BLAST of EWM24958.1 vs. NCBI_GenBank
Match: gi|1214694624|gb|OWZ08622.1| (Mitochondrial Carrier (MC) protein [Phytophthora megakarya])

HSP 1 Score: 318.161 bits (814), Expect = 1.229e-103
Identity = 174/312 (55.77%), Postives = 226/312 (72.44%), Query Frame = 0
Query:   57 LALSAV-APSAPGSKPQ--ESTLKKFLVSGTVAWIYEFGIGHFLEFVKVLKQTKPG-TYFQLVRGIVSEKGITGVWDGFFPWGSIQAIAKGAVFGGAHALALGQVEPMVESGILSPLIAQTVAGGIGGGFQGLVLSPTLLLKTRVMTDPIFRQKMSVWETSKQSARVGMVVIQKEGLPALMKGSLTFSLKRVADWGTRFYFAVLSEDLFFRQGDASHVLTNQEKLAASLIGGTLSAFLTLPLDVMVAQIQQASKAGEKVSVLETFQSEFRQGGWERVAGFATKGFLARTLHVALTTALMKTLTSVVYEWVYG 364
            LALSA   P A  +K +  E    K +V   V   YEF +GH+LEF+K++KQTKP  +Y  L + I+  KG+ G+WDGFFPWG+IQ +AKG+VF   H++A   + P+V S  LS   ++ +AGGIGGGFQG VLSPTLLLKTRVMTDPIFR+ M+  ET  +S R+G+ VI KEG+ ALMKGS  FSLKRVADW TRF+F+V +E+L +++ D   VLT  E++ ASL+GG +SA +TLP+DV+VAQIQQASKAGEKVSV E F+ ++R GG  +V  F T GF+AR +H + TT +MKT TSVVY+ V G
Sbjct:   27 LALSAYRGPLAHSAKKEHKEKAGVKLVVGAGVCLTYEFALGHYLEFIKIMKQTKPQFSYLYLTKEIMHSKGLVGIWDGFFPWGAIQGVAKGSVFAWGHSIARTTLTPLVNSDKLSKGTSEVIAGGIGGGFQGFVLSPTLLLKTRVMTDPIFREHMTPLETMSRSMRIGVKVIHKEGVAALMKGSGMFSLKRVADWSTRFFFSVQAENLVYKRNDPDRVLTTSEQVIASLLGGVVSAAVTLPMDVLVAQIQQASKAGEKVSVAELFRQQYRAGGVNQVLAFGTTGFVARLVHASFTTMIMKTATSVVYDMVEG 338          
The following BLAST results are available for this feature:
BLAST of EWM24958.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106589|gb|EWM24958.1|0.000e+0100.00putative mitochondrial carrier family protein yhm2... [more]
gi|673016496|ref|XP_008862209.1|5.521e-11758.52hypothetical protein H310_00990 [Aphanomyces invad... [more]
gi|1173946359|gb|OQR94903.1|5.988e-11257.37Mitochondrial Carrier (MC) Family [Achlya hypogyna... [more]
gi|698778009|ref|XP_009822048.1|1.055e-11156.41hypothetical protein H257_00847 [Aphanomyces astac... [more]
gi|1173955960|gb|OQS02854.1|2.466e-10956.07Mitochondrial Carrier (MC) Family [Thraustotheca c... [more]
gi|669150922|ref|XP_008611023.1|4.701e-10957.43hypothetical protein SDRG_06986 [Saprolegnia dicli... [more]
gi|813198915|ref|XP_012209040.1|6.925e-10857.38hypothetical protein SPRG_14473 [Saprolegnia paras... [more]
gi|325181481|emb|CCA15915.1|3.345e-10754.40Mitochondrial Carrier (MC) Family putative [Albugo... [more]
gi|301107291|ref|XP_002902728.1|1.124e-10453.78Mitochondrial Carrier (MC) Family [Phytophthora in... [more]
gi|1214694624|gb|OWZ08622.1|1.229e-10355.77Mitochondrial Carrier (MC) protein [Phytophthora m... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5732rna5732Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications