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Properties
| Property Name | Value |
|---|
| Product | Ubiquitin-conjugating enzyme/RWD |
| Orig transcript id | gnl|cribi|Naga_100148g4.7148.mrna |
| Orig protein id | gnl|cribi|Naga_100148g4.7148 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:684330..685046 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5726 ID=rna5726|Name=rna5726|organism=Nannochloropsis gaditana|type=mRNA|length=2534bp
CACTCCAGAATGACCAGTGGGCTATTCATCGATCCCACGACGCTGCCCAG
TGATGCAGGGGGGGCCGTACAACTTCTGTTCCTGTTGCTCGTGTACGGGA
AAATCCTGATGGACTCGAGCAGCATGATAAGTGAGGGGTCGGAGCTCTTG
CTTTTAGTTCCCTCATTGGCGGGCGTGGTGGGATCAGTAGTCCTTCCTGT
TCTCGGCGCCGTGCCAGACGGGGCAATTGTCCTCTTCAGTGGGATGGGGG
ATAACGCGCAGGAGGAATTGACGGTCGGGGTCGGGGCGCTAGCGGGGTCC
ACCATTATGCTTTTGACCATTCCGTGGTGTTTGTCCATCATTGGTGGCCG
TGTCAACCTCGATCCTGTCTCGGGGGAGGCCCTCTACAAACGCCCTTCGG
GAGCATCCAAATATTGGAGCAAAGTACCCACCAAATGGCACATGAAGTAC
AACGGGATCGGAATTCTGCCACCTGTCCGAATGGCGGCGCTTATCATGCT
GTGGAGTGCCGCCAACTTCCTGATCATTCAGATCCCCGCCTTCGTCTACG
CGGCAGACGTCAGCACGGCCGCATTGGCTGAAGACGAACGTCCCTGGGCC
GGACTGGGGCTGGCAACCACCGCGCTCTCTTTCGTCCTCTACCTCCTTTA
TCAGTGGCGTACCGCGAACAGCGACGAATTGAAGAACGACAAGATAGCGG
AGATCACACTGAAGAATATTAGCCGCGGGAAGCTGTCCTTGCTGGGCGCC
TTGGGCCCGGAATTCGAAGAGGCCATTCGCGAGCACCACGCCTTGCGGCG
TTGTTCCTGGAGGGGCAGGCGGGAGAACAGTGAGGGCATGGAGACCGGCG
CCTCGGCGGCTCTGCCTTTGGCCAGTGAGTACGGCTCTCTAGCGGACGAC
TCGAGAGACCTCCGGCCCCTGAAAGCGTCGGTCATGGAACGGCTCGTCTT
CATCTGTCGACCATTTTTCCATCGGTACGACTGGGACATGACGGGAACGT
TGGACAGGGGAGAGATCTGGCAGCTTTTTGCGGATCTTGGGGAGGCGCCC
GGACCAGAGGAATTCAGGGAATTGTGGGAGGAGTACGACAGGGACGGAGA
TGGACAGCTGAACTTCCAGGAATTTTTGGACCTGGTGATCGACCACGCCA
TGAGCGTGCTGCACGAGGGTCACCATCATGAGCGGCGATCGTCGTGGCGA
GGAGAAGAAGGGGTAGGGAGAAAGCAAGCGGGGCCGGTGCATAAGGTCGA
GGCGGAGGCGGAGGCGGAGGAGGAGGAGGAGGAAGAAGAGATCCCAGAGG
ACTTGAAAGATCTGCCCTGGGAAACGCAGCAGTCGCGACTGATGCGGCGG
GCGTTCTACATGATGGCTGAAGGGACCTTGCTCATTTTGGTGTTCGCTGA
CCCGCTTATCGGGGTCCTGTCGGAGGTGGGGGCTCGGACTGGGATCCCGG
CCTTCTACGTCTCCTTTGTGCTCTCCCCCCTCGTCTCGAACGGCGCTGAG
GTGCTGGCCGCATATTCCTATGCACAGAAGAAGAGTAGCAAGACCATCTC
TATCTCCCTAGCCACCCTCATGGGGGCGGCGGTCATGAATGCCACCTTTG
TCCTCTTCATCTTCCTCCTCTTGATCTACGTGAAACGCCTGGCCTGGACG
TTCAGTGCCGAGACGGTGGCCATTCTCTTCGTGCAAATAGTCGTGGGGTT
GCTGGCGTTGTCCAAACGCCAAAGCCTGTGGCACGCCCTCTTCATCCTCT
TCCTGTACCCCGTCTCTCTGGTCCTGGTGTACGTGATGGAGAATATCTTA
AGGTTTGATTGAGGGCCAGAATTTTCGATTTAGAAAATCTTCAGCTTTGA
CTGAGGGCTATGGTGAACGCGTTGTTCCCTTTTGCATTTGAGAGGGGCTT
GAAAGAATACGAAAGCCAGTAAAAAGTGGTTGCTGAGTTTGGAGGAGATC
ACGACTGCATGTGTGCCCATAGCGGCCGAACGAAAGACTGAGGGAAGAGG
GTTCGAACCCGAACATTGCATATACACAAAGTATCAAGCGTTGATGATCA
TTTTGACAGCAAGGAGGGTAAACACGGAGCCGCACGCAAGCAGGCGTGCT
CCTCTTTGGACTCCTGTAGCTTGTCCCCGCTTATTTTGTAACAAATTATC
TGCCCCGTCCACACCCTCACAGTCGCTGCCTATGTGCATTGTTTTTTTCC
AAGCCTTCTCGTCGCCAAACGCCGACGGCAGCCACTCAGGGCCCAGTGAC
TCTGTAAGGGCGGATGTCGGTGGTATTGATCAGCCTCGGACAGAAACAGG
AGATAGGCACACACCAGCTTCCGCGTCAGAGTCGGCGATGACGGATGAAG
GCATCGGAATCTCCCCCGCTGTTCATGCGACCCTGGCGCGACAATACGCT
TTGATCCTTGCATCCAACCGAGACGAGTACCTGGCGCGGCCTACCCGGCG
GCCCTGCTTCTGGGATGCCGGGGACGAGACGAAAGAGGAAGGTTGGAATA
CGAGTCCGATGGGGAAAGGATTGAGGAAGGAGCG back to topprotein sequence of rna5726 >rna5726-protein ID=rna5726-protein|Name=rna5726|organism=Nannochloropsis gaditana|type=polypeptide|length=192bp
MDGGPGGKAGRAEAPASEPMPPVWASTDHAPHVLEEIPMLHTRAGPRDGN
QWISRVKEEMQAVIALVRINKEKDNDWFQINPVNKLCTRWEGKCWTYHQG
VRFEFTIHFDVPASYPATCPDLIIPHLDGKTAKIYRGGRICLDLHFQPLW
ARNVPKFGIAHALALGLGPWLSLEIPSLVSAGLLPVTGTTAR back to topmRNA from alignment at CM002466.1:684330..685046- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5726 ID=rna5726|Name=rna5726|organism=Nannochloropsis gaditana|type=mRNA|length=717bp|location=Sequence derived from alignment at CM002466.1:684330..685046- (Nannochloropsis gaditana)
TATCGTTGCTTTAATGACCTTGGAGCCTTGTACCCACGCACAGGGGTGGA
GAATCTCATCATGGACGGCGGGCCTGGCGGTAAGGCCGGTCGGGCTGAGG
CACCAGCATCAGAGCCGATGCCTCCCGTGTGGGCCTCCACGGACCATGCC
CCGCACGTGTTGGAGGAAATTCCAATGCTGCATACACGGGCGGGTCCCCG
CGATGGCAACCAGTGGATTTCGAGGGTGAAGGAGGAGATGCAGGCGGTGA
TTGCCTTGGTCCGCATAAACAAAGAGAAGGACAACGACTGGTTCCAAATC
AACCCCGTGAACAAGCTTTGTACACGGTGGGAGGGGAAATGCTGGACGTA
CCATCAAGGTGTGCGCTTTGAGTTTACCATCCATTTTGACGTGCCAGCTT
CTTATCCAGCAACTTGTCCAGACTTGATCATTCCGCATCTCGACGGCAAG
ACAGCTAAAATTTACCGCGGAGGCCGCATATGCTTAGACCTCCACTTTCA
GCCGCTGTGGGCCCGGAACGTGCCTAAATTTGGCATTGCCCACGCTCTTG
CACTAGGCTTAGGCCCTTGGCTATCGTTGGAAATTCCCTCATTGGTGAGC
GCCGGACTCTTGCCGGTGACGGGGACTACTGCGAGATAAATCGAGGGGGC
CCCGTCCCTGCGAAGCAATGTAATTAGTGTTCTGTAACGAAAGCAAGCAA
AAAGTACCCAATACACA back to topCoding sequence (CDS) from alignment at CM002466.1:684330..685046- >rna5726 ID=rna5726|Name=rna5726|organism=Nannochloropsis gaditana|type=CDS|length=579bp|location=Sequence derived from alignment at CM002466.1:684330..685046- (Nannochloropsis gaditana)
ATGGACGGCGGGCCTGGCGGTAAGGCCGGTCGGGCTGAGGCACCAGCATC
AGAGCCGATGCCTCCCGTGTGGGCCTCCACGGACCATGCCCCGCACGTGT
TGGAGGAAATTCCAATGCTGCATACACGGGCGGGTCCCCGCGATGGCAAC
CAGTGGATTTCGAGGGTGAAGGAGGAGATGCAGGCGGTGATTGCCTTGGT
CCGCATAAACAAAGAGAAGGACAACGACTGGTTCCAAATCAACCCCGTGA
ACAAGCTTTGTACACGGTGGGAGGGGAAATGCTGGACGTACCATCAAGGT
GTGCGCTTTGAGTTTACCATCCATTTTGACGTGCCAGCTTCTTATCCAGC
AACTTGTCCAGACTTGATCATTCCGCATCTCGACGGCAAGACAGCTAAAA
TTTACCGCGGAGGCCGCATATGCTTAGACCTCCACTTTCAGCCGCTGTGG
GCCCGGAACGTGCCTAAATTTGGCATTGCCCACGCTCTTGCACTAGGCTT
AGGCCCTTGGCTATCGTTGGAAATTCCCTCATTGGTGAGCGCCGGACTCT
TGCCGGTGACGGGGACTACTGCGAGATAA back to top
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