EWM24956.1, cds5711 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24956.1 vs. NCBI_GenBank
Match: gi|585106587|gb|EWM24956.1| (Ubiquitin-conjugating enzyme/RWD [Nannochloropsis gaditana]) HSP 1 Score: 398.667 bits (1023), Expect = 1.392e-140 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0 Query: 1 MDGGPGGKAGRAEAPASEPMPPVWASTDHAPHVLEEIPMLHTRAGPRDGNQWISRVKEEMQAVIALVRINKEKDNDWFQINPVNKLCTRWEGKCWTYHQGVRFEFTIHFDVPASYPATCPDLIIPHLDGKTAKIYRGGRICLDLHFQPLWARNVPKFGIAHALALGLGPWLSLEIPSLVSAGLLPVTGTTAR 192 MDGGPGGKAGRAEAPASEPMPPVWASTDHAPHVLEEIPMLHTRAGPRDGNQWISRVKEEMQAVIALVRINKEKDNDWFQINPVNKLCTRWEGKCWTYHQGVRFEFTIHFDVPASYPATCPDLIIPHLDGKTAKIYRGGRICLDLHFQPLWARNVPKFGIAHALALGLGPWLSLEIPSLVSAGLLPVTGTTAR Sbjct: 1 MDGGPGGKAGRAEAPASEPMPPVWASTDHAPHVLEEIPMLHTRAGPRDGNQWISRVKEEMQAVIALVRINKEKDNDWFQINPVNKLCTRWEGKCWTYHQGVRFEFTIHFDVPASYPATCPDLIIPHLDGKTAKIYRGGRICLDLHFQPLWARNVPKFGIAHALALGLGPWLSLEIPSLVSAGLLPVTGTTAR 192
BLAST of EWM24956.1 vs. NCBI_GenBank
Match: gi|971514270|dbj|GAQ83932.1| (Ubiquitin-fold modifier-conjugating enzyme [Klebsormidium nitens]) HSP 1 Score: 212.616 bits (540), Expect = 2.355e-67 Identity = 91/160 (56.88%), Postives = 124/160 (77.50%), Query Frame = 0 Query: 33 VLEEIPMLHTRAGPRDGNQWISRVKEEMQAVIALVRINKEKDNDWFQINPVNKLCTRWEGKCWTYHQGVRFEFTIHFDVPASYPATCPDLIIPHLDGKTAKIYRGGRICLDLHFQPLWARNVPKFGIAHALALGLGPWLSLEIPSLVSAGLLPVTGTTAR 192 V+++IP+L +AGPRDG W R+KEE QA+IA +++NK DNDWF+I+ N T+W+GKCW H +++EF + FD+PA+YPAT P+L +P LDGKTAK+YRGG+ICL +HF+PLWA+NVP FG+AHAL LG+GPWL+ EIP LV G++ TA+ Sbjct: 11 VVQKIPLLTVKAGPRDGEDWKKRLKEEYQALIAYMQMNKANDNDWFRISAANPEGTKWKGKCWYIHNLLKYEFDLQFDIPATYPATAPELELPELDGKTAKMYRGGKICLTIHFKPLWAKNVPHFGVAHALCLGMGPWLAAEIPHLVETGMIQHKDNTAK 170
BLAST of EWM24956.1 vs. NCBI_GenBank
Match: gi|908503922|ref|XP_013063301.1| (PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Biomphalaria glabrata]) HSP 1 Score: 210.69 bits (535), Expect = 1.326e-66 Identity = 93/157 (59.24%), Postives = 123/157 (78.34%), Query Frame = 0 Query: 33 VLEEIPMLHTRAGPRDGNQWISRVKEEMQAVIALVRINKEKDNDWFQINPVNKLCTRWEGKCWTYHQGVRFEFTIHFDVPASYPATCPDLIIPHLDGKTAKIYRGGRICLDLHFQPLWARNVPKFGIAHALALGLGPWLSLEIPSLVSAGLLPVTGT 189 L +IP+L T+AGPRDG+ WI R+KEE QA+I V+ NKE DNDWF++ NK TRW GKCW H+ +++EF + FD+P +YP T P++ +P LDGKTAK+YRGG+ICL HF+PLWARNVP+FGIAHA+ALGLGPWL++EIP L+ G++ G+ Sbjct: 9 TLAKIPLLKTKAGPRDGDLWIPRLKEEYQALIQYVQNNKESDNDWFRLES-NKEGTRWFGKCWYIHELLKYEFDVEFDIPVTYPTTSPEIALPELDGKTAKMYRGGKICLTDHFKPLWARNVPRFGIAHAMALGLGPWLAVEIPDLIQRGVVTHKGS 164
BLAST of EWM24956.1 vs. NCBI_GenBank
Match: gi|695393962|ref|XP_009520752.1| (hypothetical protein PHYSODRAFT_285084 [Phytophthora sojae] >gi|348685649|gb|EGZ25464.1| hypothetical protein PHYSODRAFT_285084 [Phytophthora sojae]) HSP 1 Score: 210.305 bits (534), Expect = 1.651e-66 Identity = 90/157 (57.32%), Postives = 120/157 (76.43%), Query Frame = 0 Query: 28 DHAPHVLEEIPMLHTRAGPRDGNQWISRVKEEMQAVIALVRINKEKDNDWFQINPVNKLCTRWEGKCWTYHQGVRFEFTIHFDVPASYPATCPDLIIPHLDGKTAKIYRGGRICLDLHFQPLWARNVPKFGIAHALALGLGPWLSLEIPSLVSAGLL 184 + +++IP+L TRAGPRDG QW R+KEE A+I V++NKE DNDWF I NK TRW GKCW++H G+R+EF + F++PA+YP P+L IP L+GKT+K+YRGG+ICL +HF PLW +NVP+FG+AHALALGL PWL+ E+P LV G++ Sbjct: 7 ESTKRTVQKIPLLTTRAGPRDGEQWTKRLKEEYLALIQYVKMNKEADNDWFTIES-NKAGTRWTGKCWSFHNGLRYEFDLEFEIPATYPVANPELCIPELEGKTSKMYRGGKICLTIHFAPLWQKNVPRFGVAHALALGLAPWLAAEVPDLVERGVI 162
BLAST of EWM24956.1 vs. NCBI_GenBank
Match: gi|815792277|ref|XP_012216726.1| (PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Linepithema humile]) HSP 1 Score: 209.92 bits (533), Expect = 2.729e-66 Identity = 92/157 (58.60%), Postives = 119/157 (75.80%), Query Frame = 0 Query: 28 DHAPHVLEEIPMLHTRAGPRDGNQWISRVKEEMQAVIALVRINKEKDNDWFQINPVNKLCTRWEGKCWTYHQGVRFEFTIHFDVPASYPATCPDLIIPHLDGKTAKIYRGGRICLDLHFQPLWARNVPKFGIAHALALGLGPWLSLEIPSLVSAGLL 184 + L IP+L T+AGPRD + W+ R+KEE QA+I V+ NKE DNDWF++ NK TRW GKCW H +++EF I FD+P +YP T P++ +P LDGKTAK+YRGG+ICL HF+PLWARNVPKFGIAHA+ALGLGPWL++EIP L+ G++ Sbjct: 4 ESTKKTLSNIPLLQTKAGPRDKDLWVQRLKEEYQALIKYVKNNKEADNDWFRLES-NKEGTRWFGKCWYIHNFLKYEFGIEFDIPVTYPTTAPEIALPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGIAHAMALGLGPWLAVEIPELIEKGIV 159
BLAST of EWM24956.1 vs. NCBI_GenBank
Match: gi|524915815|ref|XP_005112697.1| (PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Aplysia californica]) HSP 1 Score: 209.534 bits (532), Expect = 4.045e-66 Identity = 92/152 (60.53%), Postives = 120/152 (78.95%), Query Frame = 0 Query: 33 VLEEIPMLHTRAGPRDGNQWISRVKEEMQAVIALVRINKEKDNDWFQINPVNKLCTRWEGKCWTYHQGVRFEFTIHFDVPASYPATCPDLIIPHLDGKTAKIYRGGRICLDLHFQPLWARNVPKFGIAHALALGLGPWLSLEIPSLVSAGLL 184 L +IP+L T+AGPRDG WI R+KEE QA+I V+ NKE DNDWF++ NK TRW GKCW H+ +++EF + FD+P +YP T P++ +P LDGKTAK+YRGG+ICL HF+PLWARNVP+FGIAHA+ALGLGPWL++EIP L+ G++ Sbjct: 9 TLAKIPLLKTKAGPRDGELWIPRLKEEYQALIQYVQNNKESDNDWFRLES-NKEGTRWFGKCWYIHELLKYEFDVEFDIPVTYPTTAPEIALPELDGKTAKMYRGGKICLTDHFKPLWARNVPRFGIAHAMALGLGPWLAVEIPDLIQRGVV 159
BLAST of EWM24956.1 vs. NCBI_GenBank
Match: gi|953486237|emb|CEG49568.1| (ubiquitin-fold modifier-conjugating enzyme 1 [Plasmopara halstedii]) HSP 1 Score: 209.149 bits (531), Expect = 4.417e-66 Identity = 90/157 (57.32%), Postives = 121/157 (77.07%), Query Frame = 0 Query: 28 DHAPHVLEEIPMLHTRAGPRDGNQWISRVKEEMQAVIALVRINKEKDNDWFQINPVNKLCTRWEGKCWTYHQGVRFEFTIHFDVPASYPATCPDLIIPHLDGKTAKIYRGGRICLDLHFQPLWARNVPKFGIAHALALGLGPWLSLEIPSLVSAGLL 184 ++ +++IP+L TRAGPRDG W R+KEE A+I V++NKE DNDWF I NK TRW GKCW++H G+R+EF + F++PA+YPA P+L IP L+GKT+K+YRGG+ICL +HF PLW +NVP+FG+AHALALGL PWL+ E+P LV G++ Sbjct: 7 ENTKRAVQKIPLLTTRAGPRDGEAWTKRLKEEYLALIQYVKMNKEADNDWFIIES-NKSGTRWTGKCWSFHNGLRYEFDLEFEIPATYPAANPELCIPELEGKTSKMYRGGKICLTIHFAPLWQKNVPRFGVAHALALGLAPWLAAEVPDLVERGVI 162
BLAST of EWM24956.1 vs. NCBI_GenBank
Match: gi|697188619|ref|XP_009603351.1| (PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Nicotiana tomentosiformis] >gi|698518992|ref|XP_009804360.1| PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Nicotiana sylvestris] >gi|1025238877|ref|XP_016486079.1| PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Nicotiana tabacum] >gi|1025253644|ref|XP_016485266.1| PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Nicotiana tabacum] >gi|1111137617|ref|XP_019254365.1| PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Nicotiana attenuata] >gi|1102141280|gb|OIS97681.1| ubiquitin-fold modifier-conjugating enzyme 1 [Nicotiana attenuata]) HSP 1 Score: 209.149 bits (531), Expect = 5.553e-66 Identity = 90/152 (59.21%), Postives = 118/152 (77.63%), Query Frame = 0 Query: 33 VLEEIPMLHTRAGPRDGNQWISRVKEEMQAVIALVRINKEKDNDWFQINPVNKLCTRWEGKCWTYHQGVRFEFTIHFDVPASYPATCPDLIIPHLDGKTAKIYRGGRICLDLHFQPLWARNVPKFGIAHALALGLGPWLSLEIPSLVSAGLL 184 L +IP+L T+AGPRDG W SR+KEE +A+IA +NK KDNDWF+I+ N TRW+GKCW H +++EF + FD+P +YPAT P+L +P LDGKT K+YRGG+ICL +HF+PLWA+N P+FGIAHAL LGL PWL+ EIP LV +G++ Sbjct: 11 TLTQIPLLTTKAGPRDGAAWTSRLKEEYKALIAYTSMNKSKDNDWFRISAANPEGTRWKGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPELDGKTEKMYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGMI 162
BLAST of EWM24956.1 vs. NCBI_GenBank
Match: gi|805804639|ref|XP_012145555.1| (PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 isoform X2 [Megachile rotundata]) HSP 1 Score: 209.149 bits (531), Expect = 5.927e-66 Identity = 91/159 (57.23%), Postives = 119/159 (74.84%), Query Frame = 0 Query: 26 STDHAPHVLEEIPMLHTRAGPRDGNQWISRVKEEMQAVIALVRINKEKDNDWFQINPVNKLCTRWEGKCWTYHQGVRFEFTIHFDVPASYPATCPDLIIPHLDGKTAKIYRGGRICLDLHFQPLWARNVPKFGIAHALALGLGPWLSLEIPSLVSAGLL 184 + + L IP+L T+AGPRD W+ R+KEE QA+I V+ NK+ DNDWF++ NK TRW GKCW H +++EF I FD+P +YP T P++ +P LDGKTAK+YRGG+ICL HF+PLWARNVPKFGIAHA+ALGLGPWL++EIP L+ G++ Sbjct: 8 ANESTKKTLSNIPLLQTKAGPRDKELWVQRLKEEYQALIKYVKNNKDSDNDWFRLES-NKEGTRWFGKCWYIHNLLKYEFEIEFDIPVTYPTTAPEIALPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGIAHAMALGLGPWLAVEIPDLIEKGVI 165
BLAST of EWM24956.1 vs. NCBI_GenBank
Match: gi|919030788|ref|XP_013399051.1| (PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Lingula anatina] >gi|919068135|ref|XP_013415576.1| PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 [Lingula anatina]) HSP 1 Score: 208.764 bits (530), Expect = 6.619e-66 Identity = 94/152 (61.84%), Postives = 117/152 (76.97%), Query Frame = 0 Query: 33 VLEEIPMLHTRAGPRDGNQWISRVKEEMQAVIALVRINKEKDNDWFQINPVNKLCTRWEGKCWTYHQGVRFEFTIHFDVPASYPATCPDLIIPHLDGKTAKIYRGGRICLDLHFQPLWARNVPKFGIAHALALGLGPWLSLEIPSLVSAGLL 184 L +IP+L T+AGPRDG+ W R+KEE QA+IA V+ NKE DNDWF++ NK TRW GKCW H +++EF + FD+P YP T P++ IP LDGKTAK+YRGG+ICL HF+PLWARNVPKFGIA A ALGLGPWL++EIP L+ GL+ Sbjct: 9 TLGQIPLLKTKAGPRDGDLWAQRLKEEYQALIAYVQKNKEADNDWFRLES-NKEGTRWFGKCWYIHNLLKYEFDVEFDIPVMYPTTAPEIAIPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGIAQAFALGLGPWLAVEIPDLIEKGLV 159 The following BLAST results are available for this feature:
BLAST of EWM24956.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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