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Properties
| Property Name | Value |
|---|
| Product | transport protein particle bet3 containing protein |
| Orig transcript id | gnl|cribi|Naga_100186g7.5607.mrna |
| Orig protein id | gnl|cribi|Naga_100186g7.5607 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:659155..659924 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5716 ID=rna5716|Name=rna5716|organism=Nannochloropsis gaditana|type=mRNA|length=2790bp
CAAGATCTCTTGACAGTGTGGCCATGGCGCCGACTGGAATGGGCAGAACC
GGGAAAAGCGGAAACAGCAATGTCATGCCAACCCTCCGCACGTCAGCAGA
GGGGCCGCCAAGCACACGAAGCAACACAACGAAAATGGCTGGCACAATTT
CCAAACTAGACGCAGAGGCGTTTGAGAAGGCCAGCAAGATCATTAAAAAG
AAATTTTGTGAACAGGTACAGCTGGATGACTTACCAGAGCTCCGGAATGA
TTATAAAAAGAAGCTCTCTTCCCTGGAATTGCAACTTAGCGGAATGGTTC
AGGTCAAACTCGATGGAGTCAAGCGCTCCATGGACGTGATCCAGACGGCA
AATGACCAGATGGTCGCAGTTCGCGGTGAATTTGAGGGCATGTATGAACT
CTGTCGCAAGGCAGGTGAGCAAGGTAAAGTCTTGTTCGACGCTTACCCGC
GATTGAAAATGATTAATCGGGCTCGCAAAAACTTGGAGCGAACGCTCAAA
GAAGTCACTTATTACGCAAACTTGCCTGCACGAGTGGATCATCTCGTCGG
GCTCTTAGAGAAGCAGCCCATGCAGCTCCGTCAAGTGCATTTGGAAGGAC
AGCAATTGGAGCTGTGGCGAGACGAGCTTTTGCGGGAGCTGAAAGTCCAA
CAGGGGAGTAAGACGATGGCTCCGCCTCCATCCAAGTCCGGCATCGGAGG
CCCCTCACGTGTCGTCTCTGTCGGGGACCGCATGCAAGCTACCTTCGGGA
TCCACCTAGAGGAGGTCAAAAAGCTGCTGGATGCCATTCGGAAGAAGATT
TTTGACAACATTTCGAATTGCTTTGAGATTGTACAACTCGACCCCCGCAT
TTTGACCTCCACTTTGGAGATTGTGGACATGCACGCAGCATTTCAGAAGC
AAAAAGCAACGCGTGCCCGAGAACGTGCCGAGAAGAATTCAGAGGACGTG
GAGGAAGCCGTCGCGCTCTCGTTGCTGGAGGACCTACGAGCAGATCTGAT
GTCCAAGCTGAAGCAGAGGGTAGATGACCGGGCCTCGGTCATGTTCGCCC
AGACACAAGCAGAGGCGATCGCCAAGGAAGCAAGCGTGACAACCGCGGGA
GACGCTTCGCATGTGCAGCCGGACGTCTTTGCGGCTACGCTCGGCGCGGC
AACCCGTATTTTGGTCGACCTCAACTATCTGAAAGCCGAGGTAGCGCCCT
GCTTTCCTGACGATTACATGGTTATGGATACCTTTAGAATGCAATACGAA
CGATGTTTGGTGAAAGAAATTTGTAAATTGTATCAAGGAGGCTTCTCGAA
ATTGGATCAGGGGGAACTATTGCAATTGATGGAGTGGCTTGATTACTACA
ACCAGGCCATTGTGCACCTTGGCGCCCGGACGCCGTGTTCGGAATTTGTG
CAGGCGCTGTCCATCTGCTTACAGGAATACCTTGTCCGTGTCCGCATTCA
AATGACCGAATGGTTCACGAACATACTGAATCGGGTCCAGGAGGTGGCCG
TGAACTCGGCCGGGCAACCGATCACAAGCACTCCTGAGGATTTCTTTAAC
ATCATCCATCTCCAGGTGTTGGTTGCGCTTTCCAAACTCTCTGCCGATAA
CATGTGTGCAGTCATTGTGGTCTGTTTGAACGTGATCAAAACCATCTTGG
AGGAGACACTAACGACGCTGCGGGACAAGAAATTAGAGCTCGCGTTCCCC
CCAACAATGGCTAAAGAGCGCCAGAGAGAGGGCGACCCGGTAACTCTAGA
GATGATGTGCGCGACTGTGAACGACTACGATCGCCTCCAGGAGAAGATCC
AAGAATTTCGGGAGGAACTAGGGCTGATGGGGAAGCTGAGCGAGGAGCAC
CTCGTAATGGTGGACGCGGCCGTGGACCATGTCCTAGATGGCTTCGTCAG
CATCGCCGATGAGGCAAATTCCGGATGTACGCAACTGGTTCTAGAGGACG
TGCGGGAGGCATTTGCTGAAGAGTTGTTCACGGCGGAGTGGGAGGATAGC
GTGGACGTGATGATGCAGAAGGTAGCCATGACCTTTCATGACTACTACAG
CGACCTGTCTGTCTGGCTACCTCCTTTTTATTTCGCGCGGCTCGTAAAAG
AATGCTTGGAAAAAGTCATGGCGCTCTATCTTTTCTTCTTGTTTCGACGA
GGCGGGGCGAAGGGCAAGGACGAAAAGGCGGTCGTAAAGTCGAGGCCTTT
TGCAGATCCATTGGTCGTCGCACAGAAGCTCCGTAACGACCGAGAGGCAA
TGGCAATCTTCTTCGATGACTACGAGGAGCAGCTCAGGATCGCTGGGCTG
CGGGAACCGGCTGCACTGGAGTTGCAACTCGCTGTGCTCGACCACATTGT
AGACCTTTTCGAAGGAGGCGTGACACTAGAGACAGACGCCACCGATGCGC
TGCTTCGCGAGTTCGGCCCATGGGGAGTGGATGCCTTGCTGGCGATCTCT
TTCCTAAGAGGAGACAAGGACAAGACGGGGTTGGATCTCAAAGAACGTTT
AAAGAGGCACTGTGCGCGTACCATCCGTCCTACGTTGAGAGGGGCGGGAG
GACAGGCTGGCCTGTCAAATTTTACATATGACGGTGCAGCCGAGGCACCC
AGGAACTTCTCGGCTCGCTTTTCGCTCTCGCCTTTTGACAGTGAGGTGGA
CGCAGAGGCAATAGTTATTGGCGTCAAGCGGCTCAAAGCCAAAAAGTAAA
CAAAGAAATGTACTGTAAAGGTCAGGAGATCCAAGCTTTCGATTGACCTG
CGAAAGCTCTTTTAAATCAAGTCACAGCCGACGCCTTTTA back to topprotein sequence of rna5716 >rna5716-protein ID=rna5716-protein|Name=rna5716|organism=Nannochloropsis gaditana|type=polypeptide|length=196bp
MAADLLKKPSSTSSQHQNKKVECADSLFDYLFAAMIDTLRTGGDQGPRKE
ELLAETVRAIGFDVGYRLAESIAQGRVLAAESLEVNVMKFICKEFWIEIF
KKQIDKLQTNNQGVFVLRDAKFRWLAPFTANDESTRRAAATVLNFPCGLI
KGALENLGINSTVQAEVAPAVPSCSFTIKIRRSGSGSSSSASLSAR back to topmRNA from alignment at CM002466.1:659155..659924+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5716 ID=rna5716|Name=rna5716|organism=Nannochloropsis gaditana|type=mRNA|length=770bp|location=Sequence derived from alignment at CM002466.1:659155..659924+ (Nannochloropsis gaditana)
TGGAGCCTCATAAATCGACGTACTTCTCTATTTCTTATTACTCTTGTCCC
TAACCCCTTCGCCGTTCCAAAAATCGCGGTCTATAGAATACAGATCACAA
AGATGGCGGCCGACCTCCTCAAGAAGCCGTCTTCGACGTCGTCCCAGCAC
CAGAACAAAAAAGTGGAATGCGCAGACTCTCTTTTTGACTACCTTTTTGC
TGCAATGATCGATACTTTGCGCACAGGTGGTGATCAAGGCCCGCGAAAGG
AAGAGCTGTTGGCAGAGACAGTGCGGGCTATCGGATTTGACGTGGGCTAT
CGCTTGGCTGAGTCTATTGCACAGGGGCGAGTACTCGCGGCGGAGTCATT
GGAGGTGAATGTCATGAAGTTCATTTGCAAGGAATTTTGGATTGAAATAT
TCAAAAAGCAAATCGATAAGCTCCAGACAAACAACCAAGGGGTGTTTGTC
CTGCGGGACGCCAAATTTCGATGGCTAGCTCCCTTCACAGCCAACGATGA
GTCAACTCGACGGGCAGCGGCCACTGTATTGAATTTTCCGTGTGGACTGA
TAAAAGGCGCCTTGGAAAATCTCGGAATTAATTCCACGGTGCAGGCAGAA
GTGGCTCCTGCCGTGCCCTCATGCTCCTTCACCATTAAAATTAGACGGAG
CGGAAGTGGCAGCTCGAGCAGCGCTTCACTCTCCGCACGATGAGTCCAGA
ACAATTCAACCCTGTACAGAGCCATCTCAAAATCcacagaaaaaaaaaat
aagGCATCGTGCTGCACAGA back to topCoding sequence (CDS) from alignment at CM002466.1:659155..659924+ >rna5716 ID=rna5716|Name=rna5716|organism=Nannochloropsis gaditana|type=CDS|length=591bp|location=Sequence derived from alignment at CM002466.1:659155..659924+ (Nannochloropsis gaditana)
ATGGCGGCCGACCTCCTCAAGAAGCCGTCTTCGACGTCGTCCCAGCACCA
GAACAAAAAAGTGGAATGCGCAGACTCTCTTTTTGACTACCTTTTTGCTG
CAATGATCGATACTTTGCGCACAGGTGGTGATCAAGGCCCGCGAAAGGAA
GAGCTGTTGGCAGAGACAGTGCGGGCTATCGGATTTGACGTGGGCTATCG
CTTGGCTGAGTCTATTGCACAGGGGCGAGTACTCGCGGCGGAGTCATTGG
AGGTGAATGTCATGAAGTTCATTTGCAAGGAATTTTGGATTGAAATATTC
AAAAAGCAAATCGATAAGCTCCAGACAAACAACCAAGGGGTGTTTGTCCT
GCGGGACGCCAAATTTCGATGGCTAGCTCCCTTCACAGCCAACGATGAGT
CAACTCGACGGGCAGCGGCCACTGTATTGAATTTTCCGTGTGGACTGATA
AAAGGCGCCTTGGAAAATCTCGGAATTAATTCCACGGTGCAGGCAGAAGT
GGCTCCTGCCGTGCCCTCATGCTCCTTCACCATTAAAATTAGACGGAGCG
GAAGTGGCAGCTCGAGCAGCGCTTCACTCTCCGCACGATGA back to top
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