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Properties
| Property Name | Value |
|---|
| Product | 20 kda chaperonin |
| Orig transcript id | gnl|cribi|Naga_100122g11.3575.mrna |
| Orig protein id | gnl|cribi|Naga_100122g11.3575 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:624054..625197 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5702 ID=rna5702|Name=rna5702|organism=Nannochloropsis gaditana|type=mRNA|length=1769bp
AGGGGCGTGCACGGTGAAGAACCTGCAAACCTCGCCTTGCGAATGTGCTT
GCTCTTATTGTGGTCTGCCTGCCATTTTTCATTTTCTGAATTCATGTAAT
AACAGAGATTCGCGCGTCTCCCGCGCCTTACAACCATCCCTAATCTACGC
GTTACAGAGCGACCTTTTTCAAGCCCGCTTTGCTATGGTGGCCCAAACTG
TCTTGCCGCCTACTTACACGGCTTCTCAGCCTGCATTGGAGAAGGACGGA
ATAATTTACGAGTACACATCGGCGGCCGATCCATCCGTCTCCCCTATCCC
TTACCTGGCCCTGGGTTCCAGCCACCACGAGGAAGGTCCGACCCGTGTGA
TACCCTTCGATCTCGGTGAGAAACTAGACGTGCCCTATCAAGCCACCTCT
CCCAACCTGTTGGCGGCTTACATCCGCATTTTGCCAGGGGAGAGCCTTGA
GACGCAGGCCCGCGCCACATCTCAAGCTTTTTACGTGATACGCGGCCGCG
GGGTGTCGTCCTCCCAGGAGCATGGCGAAATCAGATGGAAGGCGGGAGAC
CTTTTCGTCCTCCCCGCGTCGGCGGCAGCAGTACGACATGCCGCTACTGG
CGTCGGTCTGGAGGCGGGGGGGGAGGCCGCCGCTCTGTACTGGGTGAGTG
ACGAGCCGCTCCTCCGGTACCTGGGGGTGACGGCCTCAGAGAAGAAGTTC
GAGCCGACGTTGTACACGAGGGAGAGGATGGTGGCCTCTGTGGAACTGCT
CAAGCACGAGGAGGGGGTGGAGCACCGCAACCGTCTGGGTATCCTGCTCG
GCAACCGGATGACCGAAGCCAACACCCTGACTCTCACTCATACGCTCTGG
TCGCTGTTGAATCTGCTACCCGCCGGACAGAAACAACGACCGCACAGGCA
TAACTCGGTCGCCCTCGACCTCTGCGTTTCCGCAGCCCCGCAAGGTACCT
ACACCCTGATGGGCCCAGAGCTGGACGCAGACGGGTGGGTGAAGGACCCG
ATTCGATTGGAATGGGCGTCCGGGGCGTGCTTTGTGACCCCGCCAGGCTG
GTGGCATTCGCACCATAACGACACGGATCAAGACGCCTGGGTCCTGCCTC
TACAAGATGCTGGGTTGCACACACACATGCGGACGTTGAAGATTGAGTTT
AGCACGGCGGAGAAGGGGGCGGAGGACTCAACCGCGTCCTCCACATCTTC
GGTGGAGTCGGACAAAACCACGGCGGCCTTGACGTCGCCATGACGCGCTT
CATTACTGGGTGCCATGGCGGTCAGGGCGGTGGCTTTTCCGAAGTGTGCG
GTCAGCGATGCCAGCTTGGCCACGACCATTTTGTTGTAGGAGGTCCGTGT
GCCTGAGGTATGTCCCGAAAACCAAACCTCATTTGTCAAACAGTAGGAAG
AATAAAGCAGGATAGATGTATACTTGAAAGTGCAGGATCGATGGGGCGAA
TATGCGTCTGCCTTTAAGAAGGGTAGGAATAAAATATGAAACGTTCGACG
TGCAGTTTGCGCTGGACTCGGGGTTGTCTTTTTGAAAGCACGGGATGGAG
ATGCGGTTATCTTGGCCTGAAAAGGCTCATGCATGTAAACCACCAAGGTA
TGTGAGAAATTCTAGGGAGCACTTGAGTGGAGTGACATTGTCCGAGAGTT
AATCAAGTCCATTGAAATGAAAGATCTGACGGAACGATAAGCGCCTCGTG
AAACTGTTTCGAATGTTTGAAATCCGAAAGTAGGCATCCACGAAGTAAAA
AGGCGCGGTACTGAGCCGA back to topprotein sequence of rna5702 >rna5702-protein ID=rna5702-protein|Name=rna5702|organism=Nannochloropsis gaditana|type=polypeptide|length=253bp
MPAALALRACVFVCLPFLLGAFVLPLFPGQKTSFSARSSFPKTMTRAHNL
DGQEIPGPLEPLANVLLVKVKDAEDMSAGGIVLPDQAKEKPTEGEVVAAG
PGRQHPETAVLMPMPVKPGSKVLYGKFDGMSVIYDGAPHVLIRDDDILLT
WTGSSMTLDAVETVRDRILVKVKKAQEKSAGGILLAPSMTKARPTEGEVI
KVGPGRIASTGEVADVKVKPGDGVKFKDFAGTEIKIQDENYLVMYSVDVL
ARW back to topmRNA from alignment at CM002466.1:624054..625197- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5702 ID=rna5702|Name=rna5702|organism=Nannochloropsis gaditana|type=mRNA|length=1144bp|location=Sequence derived from alignment at CM002466.1:624054..625197- (Nannochloropsis gaditana)
ATGCCCGCCGCCCTAGCTCTACGTGCCTGCGTATTTGTATGCCTCCCATT
TTTGCTCGGCGCATTCGTGCTACCCCTTTTTCCTGGCCAGAAGACCTCCT
TTTCTGCCCGCAGCAGTTTTCCCAAGACTATGACTCGAGGTACGTTGGCA
AAGGATACCAGGACAGCCTCTGGAAATCGAAGACACTGACAAGATCTTTC
ATCAGCCGACAACTCAACCCTTGTGATTTTTCGATCGCACGATTGTCGAT
CCTTTACAGCACATAATCTGGATGGTCAAGAGATTCCAGGCCCCTTGGAG
CCCCTGGCAAACGTGTTGCTTGTCAAGGTCAAGGACGCTGAAGACATGTC
AGCAGGTGGAATCGTCCTGCCCGACCAGGTAAGTGTTTCAATTTTTTGCA
TACCGAAATTTGGCCCCTCCGTGTGAGTGGCACAGATGTATGTTTGCTAT
GATTGTGTTATTTGAGTTACCGAGACGGGCCTGCCTCCTATATAGCCTTT
CCTGTTTTTGCCCCGCCTGGCAGGCGAAGGAGAAGCCAACCGAGGGCGAG
GTAGTGGCAGCAGGCCCAGGTCGTCAGCATCCAGAAACGGCGGTCCTTAT
GCCCATGCCGGTCAAACCTGGTAAGTCGCTGCGTGCATGTTGTGCACGCA
GCACGCCATCGGCCCATGAATTACCGAGCTCATCTTTGTTTCAGACTCCT
TGACCCTGAACCCTGTGCCCGTTCCTCGCCACCTCAGGGAGTAAAGTTCT
ATACGGGAAGTTCGACGGCATGTCTGTGATCTACGACGGAGCACCTCATG
TCCTCATCCGCGACGACGACATCCTCTTGACCTGGACGGGCTCCTCGATG
ACGCTCGATGCGGTGGAGACGGTGCGTGACAGGATCTTGGTCAAGGTCAA
AAAAGCCCAGGAGAAGAGCGCTGGGGGCATTCTGCTGGCGCCGTCCATGA
CTAAAGCGCGACCGACGGAGGGAGAAGTGATCAAGGTGGGCCCAGGCAGG
ATTGCCTCAACGGGGGAGGTCGCCGACGTGAAGGTCAAGCCAGGAGACGG
TGTTAAATTCAAGGACTTTGCTGGCACGGAAATCAAGATTCAAGATGAGA
ACTACCTGGTCATGTACTCGGTGGATGTACTCGCGCGTTGGTAG back to topCoding sequence (CDS) from alignment at CM002466.1:624054..625197- >rna5702 ID=rna5702|Name=rna5702|organism=Nannochloropsis gaditana|type=CDS|length=3048bp|location=Sequence derived from alignment at CM002466.1:624054..625197- (Nannochloropsis gaditana)
GGAGTAAAGTTCTATACGGGAAGTTCGACGGCATGTCTGTGATCTACGAC
GGAGCACCTCATGTCCTCATCCGCGACGACGACATCCTCTTGACCTGGAC
GGGCTCCTCGATGACGCTCGATGCGGTGGAGACGGTGCGTGACAGGATCT
TGGTCAAGGTCAAAAAAGCCCAGGAGAAGAGCGCTGGGGGCATTCTGCTG
GCGCCGTCCATGACTAAAGCGCGACCGACGGAGGGAGAAGTGATCAAGGT
GGGCCCAGGCAGGATTGCCTCAACGGGGGAGGTCGCCGACGTGAAGGTCA
AGCCAGGAGACGGTGTTAAATTCAAGGACTTTGCTGGCACGGAAATCAAG
ATTCAAGATGAGAACTACCTGGTCATGTACTCGGTGGATGTACTCGCGCG
TTGGTAGGCGAAGGAGAAGCCAACCGAGGGCGAGGTAGTGGCAGCAGGCC
CAGGTCGTCAGCATCCAGAAACGGCGGTCCTTATGCCCATGCCGGTCAAA
CCTGCACATAATCTGGATGGTCAAGAGATTCCAGGCCCCTTGGAGCCCCT
GGCAAACGTGTTGCTTGTCAAGGTCAAGGACGCTGAAGACATGTCAGCAG
GTGGAATCGTCCTGCCCGACCAGATGCCCGCCGCCCTAGCTCTACGTGCC
TGCGTATTTGTATGCCTCCCATTTTTGCTCGGCGCATTCGTGCTACCCCT
TTTTCCTGGCCAGAAGACCTCCTTTTCTGCCCGCAGCAGTTTTCCCAAGA
CTATGACTCGAGGGAGTAAAGTTCTATACGGGAAGTTCGACGGCATGTCT
GTGATCTACGACGGAGCACCTCATGTCCTCATCCGCGACGACGACATCCT
CTTGACCTGGACGGGCTCCTCGATGACGCTCGATGCGGTGGAGACGGTGC
GTGACAGGATCTTGGTCAAGGTCAAAAAAGCCCAGGAGAAGAGCGCTGGG
GGCATTCTGCTGGCGCCGTCCATGACTAAAGCGCGACCGACGGAGGGAGA
AGTGATCAAGGTGGGCCCAGGCAGGATTGCCTCAACGGGGGAGGTCGCCG
ACGTGAAGGTCAAGCCAGGAGACGGTGTTAAATTCAAGGACTTTGCTGGC
ACGGAAATCAAGATTCAAGATGAGAACTACCTGGTCATGTACTCGGTGGA
TGTACTCGCGCGTTGGTAGGCGAAGGAGAAGCCAACCGAGGGCGAGGTAG
TGGCAGCAGGCCCAGGTCGTCAGCATCCAGAAACGGCGGTCCTTATGCCC
ATGCCGGTCAAACCTGCACATAATCTGGATGGTCAAGAGATTCCAGGCCC
CTTGGAGCCCCTGGCAAACGTGTTGCTTGTCAAGGTCAAGGACGCTGAAG
ACATGTCAGCAGGTGGAATCGTCCTGCCCGACCAGATGCCCGCCGCCCTA
GCTCTACGTGCCTGCGTATTTGTATGCCTCCCATTTTTGCTCGGCGCATT
CGTGCTACCCCTTTTTCCTGGCCAGAAGACCTCCTTTTCTGCCCGCAGCA
GTTTTCCCAAGACTATGACTCGAGGGAGTAAAGTTCTATACGGGAAGTTC
GACGGCATGTCTGTGATCTACGACGGAGCACCTCATGTCCTCATCCGCGA
CGACGACATCCTCTTGACCTGGACGGGCTCCTCGATGACGCTCGATGCGG
TGGAGACGGTGCGTGACAGGATCTTGGTCAAGGTCAAAAAAGCCCAGGAG
AAGAGCGCTGGGGGCATTCTGCTGGCGCCGTCCATGACTAAAGCGCGACC
GACGGAGGGAGAAGTGATCAAGGTGGGCCCAGGCAGGATTGCCTCAACGG
GGGAGGTCGCCGACGTGAAGGTCAAGCCAGGAGACGGTGTTAAATTCAAG
GACTTTGCTGGCACGGAAATCAAGATTCAAGATGAGAACTACCTGGTCAT
GTACTCGGTGGATGTACTCGCGCGTTGGTAGGCGAAGGAGAAGCCAACCG
AGGGCGAGGTAGTGGCAGCAGGCCCAGGTCGTCAGCATCCAGAAACGGCG
GTCCTTATGCCCATGCCGGTCAAACCTGCACATAATCTGGATGGTCAAGA
GATTCCAGGCCCCTTGGAGCCCCTGGCAAACGTGTTGCTTGTCAAGGTCA
AGGACGCTGAAGACATGTCAGCAGGTGGAATCGTCCTGCCCGACCAGATG
CCCGCCGCCCTAGCTCTACGTGCCTGCGTATTTGTATGCCTCCCATTTTT
GCTCGGCGCATTCGTGCTACCCCTTTTTCCTGGCCAGAAGACCTCCTTTT
CTGCCCGCAGCAGTTTTCCCAAGACTATGACTCGAGGGAGTAAAGTTCTA
TACGGGAAGTTCGACGGCATGTCTGTGATCTACGACGGAGCACCTCATGT
CCTCATCCGCGACGACGACATCCTCTTGACCTGGACGGGCTCCTCGATGA
CGCTCGATGCGGTGGAGACGGTGCGTGACAGGATCTTGGTCAAGGTCAAA
AAAGCCCAGGAGAAGAGCGCTGGGGGCATTCTGCTGGCGCCGTCCATGAC
TAAAGCGCGACCGACGGAGGGAGAAGTGATCAAGGTGGGCCCAGGCAGGA
TTGCCTCAACGGGGGAGGTCGCCGACGTGAAGGTCAAGCCAGGAGACGGT
GTTAAATTCAAGGACTTTGCTGGCACGGAAATCAAGATTCAAGATGAGAA
CTACCTGGTCATGTACTCGGTGGATGTACTCGCGCGTTGGTAGGCGAAGG
AGAAGCCAACCGAGGGCGAGGTAGTGGCAGCAGGCCCAGGTCGTCAGCAT
CCAGAAACGGCGGTCCTTATGCCCATGCCGGTCAAACCTGCACATAATCT
GGATGGTCAAGAGATTCCAGGCCCCTTGGAGCCCCTGGCAAACGTGTTGC
TTGTCAAGGTCAAGGACGCTGAAGACATGTCAGCAGGTGGAATCGTCCTG
CCCGACCAGATGCCCGCCGCCCTAGCTCTACGTGCCTGCGTATTTGTATG
CCTCCCATTTTTGCTCGGCGCATTCGTGCTACCCCTTTTTCCTGGCCAGA
AGACCTCCTTTTCTGCCCGCAGCAGTTTTCCCAAGACTATGACTCGAG back to top
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