|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101727g1.8723.mrna |
| Orig protein id | gnl|cribi|Naga_101727g1.8723 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:601820..602533 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5694 ID=rna5694|Name=rna5694|organism=Nannochloropsis gaditana|type=mRNA|length=876bp
TGGGCCTGGGTGACCTCAGCCACGAACATCGCCTCAATCCTGAGGTCGAT
CTCAATCACATGAGGGTTGGTCCCAATTTACGACGATATGACGAAAGATT
GAGGCCTGGCATTTCGAGCCCGATCGTGGGGCCGAGGTCGAAAATGATTC
TGGGTAGCAACGTGTCCTGTAGGAGCCTTGTGCAGGACAACGCGGGCGCA
TATTGACGTAGTTACCAACAATTATCTATGAAAGCAACGGCAGATTTCTG
AACCCCATAGGCTTGTTGCTGTAGGCGCATATTACGACGTCGACTATCCC
TCTCGCAGGAGCGTAACACCTCTTGCAGGAGCTCAACACCTCTTGCAGGA
GTGTAACTCCTCCGAGTCCGTATCGCGGCCAGGTAATGTTTTCACGGGCA
CTGAACGCAAATCGTCACCATAATCATGACAAGCACGAATAAAAAGTACC
TGTGTGGGTGCTTAAATGGAGTAGGAAATGCCAGTGCCTGTGGCTGTCTT
GAAGGAGGGCCTCCGAATACACTCCTTGTCGGATCATGGCTGAGCGATGG
ACCCTCCTCGGACTCTGACTGGGGCTTTCGCACGAATGGGACGAAGCCAG
AGGTCTATCCGAAGCAAGCGGTCCGAGGCCTGGAACATGTTTGGCTTTCG
ACGATTGACTCCCGTACAGCCCGTCACACAACTAGAACCGCACTTTCGAA
ACGATTGAGATTCGGCGACATTGAATGAATGGGATTCGTGCTCTTGTGTA
AACGTTTACTATGTTTTCATAAAAGATTGAAAATCGTCCTTCCTCGAGGG
TGGTCCTATTGCTCTTCGTATATCGGTCTCCTCGAATAACAAGAGACACT
CGTTTGAACGAAAAGGGCAGCCTCAC back to topprotein sequence of rna5694 >rna5694-protein ID=rna5694-protein|Name=rna5694|organism=Nannochloropsis gaditana|type=polypeptide|length=148bp
MFITYIILACEFVSIRMRQIAVWARRWTSKQKPSSQLLLLLGLIFCAQLY
IIFHSSSSSCAGKEQHAIPTPASLAASPSSSPTVPLEDPPLPRLSKPLIV
ACLANMRTVSTTAYNLARVLMERVDSNSVSGWEKNPIQDVAGKKKEAF back to topmRNA from alignment at CM002466.1:601820..602533+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5694 ID=rna5694|Name=rna5694|organism=Nannochloropsis gaditana|type=mRNA|length=714bp|location=Sequence derived from alignment at CM002466.1:601820..602533+ (Nannochloropsis gaditana)
GTATTGATTTTGCAAGCGcgatcctttcctcttccttattGATTGCACCG
CGACGTTGGATCGCACGCTAACCGTTACCGCACGCACTTTTACTGCACGC
TAATCGTTACCGCTCGCACTTTTACCCCTCTGTTCTGAAATGTTCTCGCA
CCATGGGTTAAGCTGTTTGAGTCCCAACTCATCATGTACGCATATACGTC
ATTGACCGTCATGAACTTCGTCGCGTCCTTCAATGCTTAATTAACCATTT
CCGCGGCTCGCATTAATATATGTTTATTACGTATATCATTCTTGCTTGCG
AATTTGTTTCCATCAGGATGCGACAGATTGCTGTGTGGGCCCGAAGATGG
ACAAGCAAGCAGAAGCCATCCTCTCAGCTACTGCTCTTACTTGGCTTGAT
CTTTTGCGCACAGCTGTATATCATTTTtcattcttcttcctcatcgtgCG
CTGGGAAGGAGCAACACGCGATTCCTACGCCCGCTTCATTGGCAGCATca
ccatcttcttcccctacTGTGCCTCTCGAAGACCCACCTTTGCCGCGCTT
GTCGAAGCCTCTCATAGTGGCCTGTCTGGCCAATATGCGTACAGTGTCGA
CCACTGCTTATAATCTTGCACGCGTCCTCATGGAGCGCGTCGACTCGAAT
TCCGTTTCTGGATGGGAAAAGAACCCTATACAGGACGTcgcagggaaaaa
aaaagaagcttTTA back to topCoding sequence (CDS) from alignment at CM002466.1:601820..602533+ >rna5694 ID=rna5694|Name=rna5694|organism=Nannochloropsis gaditana|type=CDS|length=445bp|location=Sequence derived from alignment at CM002466.1:601820..602533+ (Nannochloropsis gaditana)
ATGTTTATTACGTATATCATTCTTGCTTGCGAATTTGTTTCCATCAGGAT
GCGACAGATTGCTGTGTGGGCCCGAAGATGGACAAGCAAGCAGAAGCCAT
CCTCTCAGCTACTGCTCTTACTTGGCTTGATCTTTTGCGCACAGCTGTAT
ATCATTTTtcattcttcttcctcatcgtgCGCTGGGAAGGAGCAACACGC
GATTCCTACGCCCGCTTCATTGGCAGCATcaccatcttcttcccctacTG
TGCCTCTCGAAGACCCACCTTTGCCGCGCTTGTCGAAGCCTCTCATAGTG
GCCTGTCTGGCCAATATGCGTACAGTGTCGACCACTGCTTATAATCTTGC
ACGCGTCCTCATGGAGCGCGTCGACTCGAATTCCGTTTCTGGATGGGAAA
AGAACCCTATACAGGACGTcgcagggaaaaaaaaagaagcttTTA back to top
|