rna5688, rna5688 (mRNA) Nannochloropsis gaditana

Overview
Namerna5688
Unique Namerna5688
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length4856
Alignment locationCM002466.1:590611..595152 +

Link to JBrowse

Properties
Property NameValue
Productap-2 complex subunit
Orig transcript idgnl|cribi|Naga_100068g26.2421.mrna
Orig protein idgnl|cribi|Naga_100068g26.2421
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:590611..595152 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100068g26gene5496Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna5688rna5688-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24997.1cds5673Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna5688 ID=rna5688|Name=rna5688|organism=Nannochloropsis gaditana|type=mRNA|length=4856bp
AGACACAGGAGTTAAAAGGCACGGAGTCATGCCGGCATCCGGGGAACCCT
CCCATGATGCCTCGACGGGTACCTCGGACTTGGGTGGTCAATCTGGAGGA
CATCCAGAGGAGCACAACACAGTTTACAAGAATCACCTATTGCCTTGGAT
AATAAGTGAAGGATTGGTTTGTATGTTGGATAACAACATGGCTGATTTTG
CGATGAAGCTAAACTTGCTTTGTGTGTCTAAGGGGGTCCACGATGTTGCG
CGCCTCTCCATCACGTCGCTGAAGGGCGACGAACGCGTGCTTCCCTTCCT
CGCGAAATTCAAACAATTGCGACGCCTGCACATCATGCTGTGTGACAATC
TTGTTAAGAGGGGTAATTTTCCGGCCGTGGAGTTGAGCAAGGCCACGCCG
TTGCTGGAGGACTTAAAGGTGTGGAAGGGGTCTGGATTCAACGCAGACCT
CGTAAAGTCAAGCAAATGCATTTACCAAGAATACCAAGAGCGACAAACAG
CAGAGGTGGAGGCGGAGCTTGCGGGTATGAGCGATGAGATGCTCGCGGGA
GAGAGGTTTAGCATGCTCAAGTCCTCGAGGGCTGTGGCGGGGAGAAGGAA
AGAGCGAGACTGGCGTTTGCGGTGGAGAACGCTGCAGAAAGTCATGAAAA
GAAGGAGAGAACCGCAGAAAGAGATGCAGATTGATGCAGAGGTGGATTTG
GATCTGTCCGCTCGCATCAAGGAGCCCCTTACCCGATTGACTGGACTGAG
AGGCCTGCGCTCTCTGAAGTGCATCTCCATTCAGGCGGACACAACCATGG
TGGTTACGCCCGGGATACGGACATGGATGGAGGAGGAGCTCCCCATGGGC
CTGGAAAGGCTGTCCATCCATGCGTCCTTGTTGGAGGGCCCCCTTCTCCC
TGCCGTGGCCCGGCGGGTCCGCCGGGCGGGGGGTCTGCCCTGCCTTCGTT
CCTTGTCAGTACATGGAGTGCGCCGACACCACTCGGAAGGCGAATCCGAG
GTCGCAACCTGTACATTGGAGATCATTGAGCTGCTGACGAGTTTGACGCA
AAAAAGCACTCCTAGCTTGGAAGAGCTCGTCGTTGTGCACAGCGTGAGGC
CTTCTTCCGACATAAAAGGCGAAGGCAAACAGTTGGGCTGGTTGGATTTC
TTGGTGAAAGATTGCCCTGCCTGGGAAAGGGAGACTCAGGCCCTGCGGGG
ATGGTGGTCGAGAGCTTGCGAGCGGCCTCCGCATTTGTACATGCTGGGCG
TCCGGGACGGGTTGGAAGCGGAGGGGATTCCAAGGCTCATGTGCAGCGGC
GACCCAGATCTCGTGGCGCTGGGCACGCTGATGTGCTGCCACATGGAGAC
CATGCAGCACCTTTATGTAGACTCGGAATGTTTCCGCGCCATGGTTGGAC
AGTTTCAAGATTGTCACCCGATATACGCCCGCGCTCACGCGGTGAGGGCC
CTTATCAACTACATCGTTTCGCAATGTGATTTGCAAAACGGCGACATTCC
TATAAGCTTCAGCTGGGTTCCTGTCTTTAAGGACTTGATTCACTTTGTCT
TTGCATTTTGCGAAGCTTCCACAGACTTGATGGCTGGCGAGCTGAGCGAT
CCAATGTCGGTAATGCTCGTGAGAAATCTAATATATATGGCCAACTATTT
CGTGCGCCATGGTCATGTGGCCTCGGAGGCCTTCCAAGAGGACGAACTCG
TGGCGGTCACCGTACTTGCAGCGCAAGCTCTTACTTTTCGGTCTCATCTC
TCTTACACGACGCGGCTGGAAGCTTCTGAGATCGTAAGTCGTGTCTTCGA
CCATTTCATGCGGCAAGACGAGCACGCGCGTCTCCGTTGGGAAAGCAGTG
TAGCCGCTGCGGTTGAGAAAGGTCTCACGGCCTCTCTTCGGGAGGGCGAG
GGAAAGACATGGAGGCCTGGGGTGTGGAAAAGCTTTTCTCCACAAGTGAC
GCCCGCTGAGGGCACTGCAAGCGCAAAAGTGGCCGTGATGATGGTTCGTT
TGATGCTTGTCATGTTCCATGAATGGTGGGAGTTCGGGCGAGAAATGAAA
AGGGGCAGGGTTCCCGCCAAGGACGTCTCAAAGTATGCGCAAAAGACTGA
TAAACATATGATGTCTGAAATTGTGTCACTTATGTTCGTCTTTTTGTCGA
AAGATGCGGAAGCTCATTTGGAGGCTTTACGGGCGCAGAAAATGCTGGTC
TCCGTGGTGGTAGTCTTTCTTCTCGACACGTCAACGCCGGCCCTCCTCTG
GTTCTGTTCCCTCCCAGACATCCCCCCATGGTTCCCGGGTTTCATGGTCG
ACATCCTACTCGGGAGTAGGGACAATCTTTGTTTTCCCAAGTACCTTACT
GCTCTGCTAACGGCGGGTGTGAAGCGCTCCACGGGAATGCAATTAAACCC
CTCTGTGAACCTCCTGGCAGGACGAAGGATCCTCCTGGAGACCCTCTTTG
CCCCGGAGAGAAAGGACAGGTTCTGGAAAGTGCTTTCCCGCCACGCGAAT
CAGGTGGGAAAGATGACGTTGTTTAGCTTGCTTGCCGAGGCGGCAAATCG
TTGCCTGTTGGAACCTGGAGGCCCCGTTGGTCCCGTGGAGAGACAGCAGC
TGGCTGATGCGGTGAATGTGCTTAGGCTTGCGGAAGAAGGCTCCTCAGAC
GCCCTGTACGTCCTCCGCGCACTGAAAGGTGAGCCTGAAAGCCATCTCAG
AGACGTTCTGTCGCAAATTCAAATTGCTCTTGCTGCCAAGACGATTACGG
GAAAGCCGCGGCCCATGAAGAGTAGCCTGTTCGACGAGCTTTTTGTGGCC
TTGGCGGGTTTGGACGCAAACAGCTTGTCCACGGAGGCGTCCAATTTGAA
TCACACGGTGGATGGGGCGTCGCAAACCTTCGTGAGCAGCAGGGGCACTG
CAACATGTAATGATGCTTCTGGGACTGCCGAGACTTCAGCAGTTGTCTTG
TCTTCGCTCTTAGACGCGACGCTGACACAGTTCAGGGAGGGAGACTTGAT
GGGCCGCCTCTGCGATTTCATAGAAGGCTGCAAACACAAACGGACGTTGA
CTTGTCTGGGAACGCCGCAGGGCAAACAAGTTTGGAAATTTCCTAGACTG
CGCATTTTGGGAGCGGCTTTGTCTTCTTTGACTCTCTTGTCCTCGGTATT
TGTCGGTTTGCTGGCAATCCCCGACACTCAGGTATCCGAGCAGAGCTCGG
AGATACGGGACGCCGACGGACATGGGGCTAGATCATCCAAGGACATAAAG
TCTGATATCAAGAGGGGAGACTCACCGGACAAGCTCACATTTGGGTCTCA
TTGGTATCCCGTGGCTCGATCGGCAGATGATTTCCTGGACGCATGGGTGG
AGGTTCTGACGAACGTGGAGAAAGAGCCTGTGCTGATCCTCGGCTTGGCC
AGGGCAGCGGTCCGGGAGACGGGTGTCGTTCGCAGGCTGTGCAAACGGGC
AGCTTGCAACAGAAGCATTGTGAACCGGCTGGCCCGCACTCTCGCCATGC
TGAGCGCGACCGTGTCGTACTTCCCGAATGCCAGGGTAGAGACGCACGTC
GGCGCAGGAAAGATGTTGCGCCATTATGAGGGCGCCAACCATCGTGGGGG
AGAAAGAGAGGCCGCCAGACAAGCGGCGGAGACGGAGTGGGAAGGATGCA
GAAAAGAGAAAGAGTCTCTGGAGGAAGGCTCGAATGCTCGCGAGCATCCG
TACGTGGAAAAGGCTTTGTCCTTCGGCGTGTGCATGGTTGATCCGGAAGC
CATAATAAAATGTCTCCAAAAATCGGAAGAAAAGGATGCCAGCACTCCTG
CGACCTTCCGCTTGGACGAGCATGTTCCCATGGTCGTCATGGCCCTCCTG
GCCCGGCCGGCCACTTCGGGAGCCGTCTTGAAACGATCGGTATTAGTGGT
GGAAATGCTCTTGACGCGCCAACGCCAACGCGTCCTGCCGTCGCTGGATT
TGCCTGCGGATACCTTCGACAAGAAAGATCATCGCGAGGTCGGCTGCCAT
GGGCCTGCTTACGAAGACCGGGCAATTTTAATGAGCCTGAATGGTACTAC
AGGTATCTCCCAGGCTTTTGATAAGCATATGGTGTTTCTTTTACAGGAAG
AAAAGTCAAAAATCGCTGATCAGCCCGGGTTGTTTCACCTAATGCGTACA
TCCACGGTCGAGGAGTTGATTACATACAATGCGATTCGCACGCTACGCTT
TATCATCCACGAGAATCCTACCTATGTGCTACCTGACGTGCTGAATCCGC
GTTGCTCCGTGGGGCTGCGTGGGCTGGTCGGCGACTGTCTGCAGTTTGCT
CCAGCCTTCGCCAAGGCCTGCGTTGAGTCGTGTCTACCCCGGCTGTTGAT
GTTCTTGATGGAATGCGGGAAGGCAGCGGCGTCGTCATGGGAGATGGTGC
GCGGCATCATGAAGGCGGTGCCCGATTTGATCGCACGAGTGTCGATCCTC
TTGCTTTTGGAAGAGGGAGGGAAGGAGGAGAAGGCGGAGGTGAGGCAGGA
GAAACCGGAGGGCGGCGCTCCAGTCGACAGCTACCTTTGCCTGTACACGC
TGGTTTCCAACTGGACCTGCGATCGACGTGTGAATCGCGGTGACAACAAA
GCGGCAATAGAAGAGTTTGCTGCTCTGGTCCCGCGTAAGACGACGGTCCA
GGATCCGGAGAAGAGGAGAAGGCTTAGGTGTCAAACATAAAAGGAGCGAC
ACAAGCTTTACGACATGGGGCTTCATGAGGCCCAATCAGAGATTTGGACC
TCATTGGCCAATCATACCACACAGCTGGGAAAAATGAGGACAAGTTCTTG
TCCGCTTGCCCGTATTAGCGTCTATCAAAGGATTCATGGCGACTTCTTGA
CCAGCT
back to top

protein sequence of rna5688

>rna5688-protein ID=rna5688-protein|Name=rna5688|organism=Nannochloropsis gaditana|type=polypeptide|length=1060bp
MIQWLCHRLVCGVPCTVFLVFGHAFLSLRPSSHVCISFRPLRPPPYQASQ
LGMNALNLPGFSSGDQARGLLNFITDIRNCTSREAEQMRIDKELANIRHK
FSSPATLSPYQRKKYVWKLVYIFTLGYEVDFGHMEIIALISSGKFSEKSV
GYVAVSLLMKADNEMMTLVVNSVRNDLLSHNNYFQALALASIANIGGAEF
AEALTPDVQRVLTSRDTDSVVRKKAALCLLKLFRTNPDNITHPEWAPQMA
RLLEERHLGLLLSAMSLLIALASKVPRDYEICVPYVIALLSRLVLTPRAV
MDDYLYYNTPSPWLQVKFLKYLQLYPPPEDSVQAERLTDSLRKILTHTAV
SDTVNKSNADHAILFEAVNVVLSQGQAAHAGLKAQALTLLGRFISVKEPN
IRYLGLEALGRFAQLAEGRGGEEGVKKHMSTVFVSLKDADISVRRQALDL
VFAMCDASNARDIVGELTTNLATADAGIREEMVLKIAVLAERYATDLRWY
VDTVLQLIHLAGDYVADDVWHRIIQIVTGHKDLQAYAAENCFRALEARNV
HEAAVLVGGYVLGEFGYLIAEQPGRGGEVQVRVLQKHFAGTTPRTKALLL
STYAKLENLYPEVRPLVLPTFEKYTPSTELELQQRACEYASLVSQGDDIL
DGVLQEMPAWPEDKESALEARLRKKQEASEDRTGFQKSGEGGMEDNGATR
GGRNEGGSSRKTGPMRPTAAGFSGKGNGGGGGVEDLLNLGSGEAVNAGPT
AALTTAMGKASISPASAEDDLLGITDSGGDTAASGIRTSGVSNAGTEAGV
HGIPEEMRPRLETAFKALITTVSGVLFENDKLQVGIKHDYRGSQGKMVLF
YGNKTSEALTDFAASVTKTFYLQMESQDPPKIVAAGEQAKQSLSMEVMKP
FDYSDAPELLLSYTFQGQKHLYELTLPIVPTSFFEPVTLAAPDYMARWRS
LEGQSRERQEILQQPANFSYDSSALVAFRLKILDGLHLAQAQGLDQNDLS
LSAVGSLRTGTAGPDGGKISVGALLRIEVNAQVRAMRITARAVHGTVAAA
LVNTIKALVT
back to top

mRNA from alignment at CM002466.1:590611..595152+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna5688 ID=rna5688|Name=rna5688|organism=Nannochloropsis gaditana|type=mRNA|length=4542bp|location=Sequence derived from alignment at CM002466.1:590611..595152+ (Nannochloropsis gaditana)
AAGCCTGTTATTCTCGAATAAGCGTTCCAGACTGTCTGACAAGGGCCTTA GACTCAAACCAAAGACGCTTCCGCCTGCCAAAACGTCGTCAAAACGGTCG CACGGGAGGGCAATGATCACCGCGCCGGTGCGAGGAGCGAGCGTGGCAGT GAGAGCATCTAATTTAATGCACCCGCTCCACCCTCGCTCAAGGAAGGCTT GAGGCAGCAACGTTCCCTGTTTCCTCGGGCTCTGTCTCAAGGACAACGCC AGCCATACACGTGAACGTGTGCGGATCCACCGCCTGAAGTCTGGACAATG CAAAATGATCCAGTGGCTTTGTCATAGGCTTGTCTGTGGCGTCCCTTGCA CTGTGTTTTTGGTCTTCGGGCATGCCTTCTTGTCCCTGCGCCCATCCTCA CACGTCTGCATCTCGTTTCGGCCCcttcggccccctccctatCAGGCCTC CCAGCTAGGTATGAATGCGCTTAATCTCCCGGGCTTTAGCTCGGGCGATC AAGCTAGGGGCTTGCTGAATTTCATCACCGACATTCGAAACTGTACTTCC CGGGAGGCAGAGCAGATGCGTATTGACAAGGAGCTCGCCAACATCAGACA CAaattttcttcccctgccaCGCTTAGCCCTTACCAACGCAAAAAATACG TGTGGAAACTCGTCTACATATTCACGTTGGGATACGAGGTCGACTTTGGT CACATGGAGATCATTGCTCTCATTTCATCCGGAAAGTTCTCCGAAAAAAG CGTGGGCTACGTCGCGGTCTCCTTGCTTATGAAGGCGGACAACGAGATGA TGACCCTCGTCGTGAACTCGGTCCGCAACGACCTTTTGTCTCACAACAAC TACTTCCAAGCTTTGGCTCTGGCCTCCATTGCCAACATAGGGGGCGCTGA GTTTGCGGAGGCGTTGACTCCTGACGTGCAGCGGGTACTCACTTCCCGTG ACACGGACTCCGTTGTGCGCAAGAAGGCAGCCTTGTGCCTCTTGAAATTG TTTCGCACGAATCCGGACAACATCACACACCCGGAGTGGGCCCCTCAGAT GGCCCGCCTGTTGGAGGAACGGCACCTGGGCTTGCTCCTCTCCGCCATGT CGCTTCTGATCGCCCTGGCCTCCAAGGTCCCGAGGGACTACGAAATCTGC GTCCCGTACGTCatcgcccttctctcccgcctcgtGCTTACGCCGCGGGC GGTCATGGATGACTACCTGTACTACAACACGCCGTCTCCCTGGCTCCAGG TCAAGTTTCTGAAGTACCTGCAGCTCTACCCCCCTCCGGAGGACAGCGTC CAAGCCGAGCGCCTGACAGACTCCTTGCGGAAGATTTTGACGCACACGGC GGTCTCGGACACGGTGAACAAGAGCAACGCCGACCACGCCATTCTGTTTG AGGCCGTGAACGTGGTCTTGTCGCAAGGGCAGGCGGCCCATGCTGGCCTG AAGGCCCAGGCTTTGACGCTGCTGGGTCGATTTATCTCGGTGAAGGAGCC CAACATTCGGTACCTCGGgctggaggccttgggcagGTTTGCGCAAttgg cggaagggaggggtggggaggaaggggtcaagAAGCACATGTCTACAGTC TTTGTCTCCCTCAAGGACGCCGACATTAGCGTGCGGCGGCAGGCGCTGGA CCTGGTCTTTGCCATGTGCGACGCGTCCAACGCGCGCGATATTGTGGGAG AGCTGACCACCAACCTAGCCACGGCAGACGCTGGCataagggaggaaatg gtcCTGAAAATAGCCGTTTTGGCAGAAAGATACGCGACCGACCTGCGTTG GTACGTGGATACAGTGCTCCAGCTGATTCACCTTGCTGGAGACTACGTCG CAGACGACGTCTGGCATCGTATTATCCAAATCGTGACGGGCCACAAGGAT CTACAAGCGTACGCGGCTGAGAATTGTTTTCGAGCCCTGGAAGCCCGCAA CGTGCACGAGGCCGCCGTCTTGGTGGGAGGCTATGTGCTGGGGGAGTTTG GGTACTTGATTGCGGAACAGCCGGGTAGGGGGGGCGAGGTGCAGGTCCGC GTATTGCAGAAGCACTTTGCCGGGACGACCCCTCGCACTAAGGCCTTGCT CTTGAGCACGTACGCCAAGCTGGAGAACCTATACCCTGAAGTCCGACCGC TGGTGCTACCGACGTTTGAAAAATACACGCCTTCCACGGAGCTGGAATTG CAACAGCGAGCATGCGAATATGCCTCATTGGTGTCACAGGGGGACGATAT CTTGGACGGCGTTCTACAGGAAATGCCAGCATGgccggaggacaaggagt cgGCTTTGGAGGCTCGCTTGCGAAAAAAGCaggaggcctcggaggacAGG ACGGGCTTCCAgaagagcggggagggagggatggaggataACGGAGCAAC CCGTGGCGgcaggaatgagggaggaagctctAGAAAGACCGGCCCAATGA GGCCCACGGCGGCAGGGTTCagtgggaaggggaatgggggcgggggcggg gtggaggacctTTTGAACTTGGGGTCGGGCGAAGCAGTCAATGCGGGACC AACGGCAGCTCTCACCACGGCCATGGGTAAGGCCTCGATTTCCCCGGCCT CTGCAGAGGATGATCTGCTTGGTATCACCGACAGCGGTGGAGACACCGCG GCCAGCGGTATCAGAACAAGTGGTGTCAGCAATGCGGGGACAGAGGCCGG CGTGCATGGGATCCCTGAGGAGATGCGCCCACGATTGGAGACCGCTTTCA AGGCTTTAATCACGACCGTCTCGGGTGTCTTGTTCGAGAACGACAAGTTG CAAGTGGGCATCAAGCACGATTACCGCGGATCTCAGGGGAAAATGGTATT GTTTTACGGCAACAAAACCAGCGAGGCTCTAACAGACTTCGCAGCTTCTG TCACCAAGACATTTTATTTGCAGATGGAAAGCCAGGATCCCCCCAAGATT GTGGCAGCGGGGGAGCAGGCCAAACAGAGCTTAAGCATGGAGGTGATGAA GCCATTTGACTACTCGGACGCTCCCgagcttctcctttcttacACTTTTC AAGGCCAAAAACATCTGTACGAGCTGACGCTTCCCATCGTCCCCACCAGC TTTTTTGAGCCCGTCACACTTGCTGCGCCCGACTACATGGCCCGTTGGCG AAGTCTCGAAGGTCAGAGTAGGGAGCGACAGGAAATCCTGCAGCAGCCCG CAAATTTTTCGTACGACTCCTCCGCTTTGGTTGCCTTTCGCCTTAAGATA TTGGATGGCTTGCACCTGGCACAAGCCCAGGGCCTCGACCAAAATGACCT GTCCTTGTCGGCGGTGGGCTCTCTGCGGACCGGGACGGCCGGGCCAGACG GTGGGAAGATCTCAGTCGGGGCCTTGTTGAGGATCGAGGTCAATGCGCAA GTCCGGGCGATGCGTATAACAGCGCGGGCCGTCCACGGAACAGTCGCGGC TGCTTTGGTGAACACGATCAAGGCACTCGTGACATAAAGCAGCTCTTGTG GGACGGGAAAGAAATAGCAAAAGGAGACAACAGGTGCaggcggccgtgga gggtTTTGGGGTGGGGCAGCACGGCAAGACATCCTCCATGTATTATTTAC AAAGAACACTTAAAGTGCACAGAGGGACCAAGAATCGTGGTGGTACTCGT GCTTCATCTATGAACATCTAGCAGTGAACGTACGATCGctgccatttcct tcctcactGCTTCTGCCACAGTCGCTCATACGCCTGAAGGCCTCTCTCTG GCCCGTGCCGCAATATCATGGCCTGCCTCAGAGCCTTCTCTATCGTCGCC ATTACTTGATGCCTCTCATCGACCCCCTCGGTCGTGTCTTGGCAAATGAT CTCCACCATTCTTGTTACATGTTCTTGAGTCCCTTCCATTTGCCCCAGAC CGGCCTTTCCACCATGGAGAGGTCTCTCCTGCGCGTGGCGGAGATTGCCC CCCGACTCAATTGCCCAAGTCAACATGTGCATGATCACGTTCTTCAAATT GCCATGGTTGCACACCTGCCAAGCAAGGCTTAAACCGGGCTTCAAATGAT AGACCTGGTGAGCCCATCCCGGAGGAATGACGACAagttccccctcttct tgcaCCAAGGCTTGCACTCCTTCCACGTCTGCCAGCACTTCTGGGAGATC AAGAGTCACAGCACCTTCAAATATTTCTGGTACCTTGTAATACAGGTCAA AATCCGTGCTCTTCCACCCAGCACtgacttctccctcccaggcttcTGGA AGTACTCTCTTCAGACCCAAGTCCGCGCTgcagggtgggaaaaagGTCCA TATCTTGCGTCCTTCCAGTAGATAATTGACCCCTGTCCATTCGAAGGGAT CGACATGTAAAAACGAACGCGCACCTGTCCCCCCAAGAATAAGGCAATGC TTTTTTGGTCGAATACGTTGAGGAAAAAGATCGAAATAATCTAGTTTTCC AAACAATGACGGCGGTAAACGAAATGGGTCCTTTATCTTCCGATTCTGAG AATCTTCCAACAATTTTTCATTCAACAAGTACCAAGCTTCCT
back to top

Coding sequence (CDS) from alignment at CM002466.1:590611..595152+

>rna5688 ID=rna5688|Name=rna5688|organism=Nannochloropsis gaditana|type=CDS|length=3183bp|location=Sequence derived from alignment at CM002466.1:590611..595152+ (Nannochloropsis gaditana)
ATGATCCAGTGGCTTTGTCATAGGCTTGTCTGTGGCGTCCCTTGCACTGT
GTTTTTGGTCTTCGGGCATGCCTTCTTGTCCCTGCGCCCATCCTCACACG
TCTGCATCTCGTTTCGGCCCcttcggccccctccctatCAGGCCTCCCAG
CTAGGTATGAATGCGCTTAATCTCCCGGGCTTTAGCTCGGGCGATCAAGC
TAGGGGCTTGCTGAATTTCATCACCGACATTCGAAACTGTACTTCCCGGG
AGGCAGAGCAGATGCGTATTGACAAGGAGCTCGCCAACATCAGACACAaa
ttttcttcccctgccaCGCTTAGCCCTTACCAACGCAAAAAATACGTGTG
GAAACTCGTCTACATATTCACGTTGGGATACGAGGTCGACTTTGGTCACA
TGGAGATCATTGCTCTCATTTCATCCGGAAAGTTCTCCGAAAAAAGCGTG
GGCTACGTCGCGGTCTCCTTGCTTATGAAGGCGGACAACGAGATGATGAC
CCTCGTCGTGAACTCGGTCCGCAACGACCTTTTGTCTCACAACAACTACT
TCCAAGCTTTGGCTCTGGCCTCCATTGCCAACATAGGGGGCGCTGAGTTT
GCGGAGGCGTTGACTCCTGACGTGCAGCGGGTACTCACTTCCCGTGACAC
GGACTCCGTTGTGCGCAAGAAGGCAGCCTTGTGCCTCTTGAAATTGTTTC
GCACGAATCCGGACAACATCACACACCCGGAGTGGGCCCCTCAGATGGCC
CGCCTGTTGGAGGAACGGCACCTGGGCTTGCTCCTCTCCGCCATGTCGCT
TCTGATCGCCCTGGCCTCCAAGGTCCCGAGGGACTACGAAATCTGCGTCC
CGTACGTCatcgcccttctctcccgcctcgtGCTTACGCCGCGGGCGGTC
ATGGATGACTACCTGTACTACAACACGCCGTCTCCCTGGCTCCAGGTCAA
GTTTCTGAAGTACCTGCAGCTCTACCCCCCTCCGGAGGACAGCGTCCAAG
CCGAGCGCCTGACAGACTCCTTGCGGAAGATTTTGACGCACACGGCGGTC
TCGGACACGGTGAACAAGAGCAACGCCGACCACGCCATTCTGTTTGAGGC
CGTGAACGTGGTCTTGTCGCAAGGGCAGGCGGCCCATGCTGGCCTGAAGG
CCCAGGCTTTGACGCTGCTGGGTCGATTTATCTCGGTGAAGGAGCCCAAC
ATTCGGTACCTCGGgctggaggccttgggcagGTTTGCGCAAttggcgga
agggaggggtggggaggaaggggtcaagAAGCACATGTCTACAGTCTTTG
TCTCCCTCAAGGACGCCGACATTAGCGTGCGGCGGCAGGCGCTGGACCTG
GTCTTTGCCATGTGCGACGCGTCCAACGCGCGCGATATTGTGGGAGAGCT
GACCACCAACCTAGCCACGGCAGACGCTGGCataagggaggaaatggtcC
TGAAAATAGCCGTTTTGGCAGAAAGATACGCGACCGACCTGCGTTGGTAC
GTGGATACAGTGCTCCAGCTGATTCACCTTGCTGGAGACTACGTCGCAGA
CGACGTCTGGCATCGTATTATCCAAATCGTGACGGGCCACAAGGATCTAC
AAGCGTACGCGGCTGAGAATTGTTTTCGAGCCCTGGAAGCCCGCAACGTG
CACGAGGCCGCCGTCTTGGTGGGAGGCTATGTGCTGGGGGAGTTTGGGTA
CTTGATTGCGGAACAGCCGGGTAGGGGGGGCGAGGTGCAGGTCCGCGTAT
TGCAGAAGCACTTTGCCGGGACGACCCCTCGCACTAAGGCCTTGCTCTTG
AGCACGTACGCCAAGCTGGAGAACCTATACCCTGAAGTCCGACCGCTGGT
GCTACCGACGTTTGAAAAATACACGCCTTCCACGGAGCTGGAATTGCAAC
AGCGAGCATGCGAATATGCCTCATTGGTGTCACAGGGGGACGATATCTTG
GACGGCGTTCTACAGGAAATGCCAGCATGgccggaggacaaggagtcgGC
TTTGGAGGCTCGCTTGCGAAAAAAGCaggaggcctcggaggacAGGACGG
GCTTCCAgaagagcggggagggagggatggaggataACGGAGCAACCCGT
GGCGgcaggaatgagggaggaagctctAGAAAGACCGGCCCAATGAGGCC
CACGGCGGCAGGGTTCagtgggaaggggaatgggggcgggggcggggtgg
aggacctTTTGAACTTGGGGTCGGGCGAAGCAGTCAATGCGGGACCAACG
GCAGCTCTCACCACGGCCATGGGTAAGGCCTCGATTTCCCCGGCCTCTGC
AGAGGATGATCTGCTTGGTATCACCGACAGCGGTGGAGACACCGCGGCCA
GCGGTATCAGAACAAGTGGTGTCAGCAATGCGGGGACAGAGGCCGGCGTG
CATGGGATCCCTGAGGAGATGCGCCCACGATTGGAGACCGCTTTCAAGGC
TTTAATCACGACCGTCTCGGGTGTCTTGTTCGAGAACGACAAGTTGCAAG
TGGGCATCAAGCACGATTACCGCGGATCTCAGGGGAAAATGGTATTGTTT
TACGGCAACAAAACCAGCGAGGCTCTAACAGACTTCGCAGCTTCTGTCAC
CAAGACATTTTATTTGCAGATGGAAAGCCAGGATCCCCCCAAGATTGTGG
CAGCGGGGGAGCAGGCCAAACAGAGCTTAAGCATGGAGGTGATGAAGCCA
TTTGACTACTCGGACGCTCCCgagcttctcctttcttacACTTTTCAAGG
CCAAAAACATCTGTACGAGCTGACGCTTCCCATCGTCCCCACCAGCTTTT
TTGAGCCCGTCACACTTGCTGCGCCCGACTACATGGCCCGTTGGCGAAGT
CTCGAAGGTCAGAGTAGGGAGCGACAGGAAATCCTGCAGCAGCCCGCAAA
TTTTTCGTACGACTCCTCCGCTTTGGTTGCCTTTCGCCTTAAGATATTGG
ATGGCTTGCACCTGGCACAAGCCCAGGGCCTCGACCAAAATGACCTGTCC
TTGTCGGCGGTGGGCTCTCTGCGGACCGGGACGGCCGGGCCAGACGGTGG
GAAGATCTCAGTCGGGGCCTTGTTGAGGATCGAGGTCAATGCGCAAGTCC
GGGCGATGCGTATAACAGCGCGGGCCGTCCACGGAACAGTCGCGGCTGCT
TTGGTGAACACGATCAAGGCACTCGTGACATAA
back to top
Synonyms
Publications