Naga_100068g26, gene5496 (gene) Nannochloropsis gaditana

Overview
NameNaga_100068g26
Unique Namegene5496
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:590611..595152 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100068g26
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:590611..595152 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
GO:0005794Golgi apparatus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02140NO11G02140Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5688rna5688-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5688rna5688Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5688

>rna5688-protein ID=rna5688-protein|Name=rna5688|organism=Nannochloropsis gaditana|type=polypeptide|length=1060bp
MIQWLCHRLVCGVPCTVFLVFGHAFLSLRPSSHVCISFRPLRPPPYQASQ
LGMNALNLPGFSSGDQARGLLNFITDIRNCTSREAEQMRIDKELANIRHK
FSSPATLSPYQRKKYVWKLVYIFTLGYEVDFGHMEIIALISSGKFSEKSV
GYVAVSLLMKADNEMMTLVVNSVRNDLLSHNNYFQALALASIANIGGAEF
AEALTPDVQRVLTSRDTDSVVRKKAALCLLKLFRTNPDNITHPEWAPQMA
RLLEERHLGLLLSAMSLLIALASKVPRDYEICVPYVIALLSRLVLTPRAV
MDDYLYYNTPSPWLQVKFLKYLQLYPPPEDSVQAERLTDSLRKILTHTAV
SDTVNKSNADHAILFEAVNVVLSQGQAAHAGLKAQALTLLGRFISVKEPN
IRYLGLEALGRFAQLAEGRGGEEGVKKHMSTVFVSLKDADISVRRQALDL
VFAMCDASNARDIVGELTTNLATADAGIREEMVLKIAVLAERYATDLRWY
VDTVLQLIHLAGDYVADDVWHRIIQIVTGHKDLQAYAAENCFRALEARNV
HEAAVLVGGYVLGEFGYLIAEQPGRGGEVQVRVLQKHFAGTTPRTKALLL
STYAKLENLYPEVRPLVLPTFEKYTPSTELELQQRACEYASLVSQGDDIL
DGVLQEMPAWPEDKESALEARLRKKQEASEDRTGFQKSGEGGMEDNGATR
GGRNEGGSSRKTGPMRPTAAGFSGKGNGGGGGVEDLLNLGSGEAVNAGPT
AALTTAMGKASISPASAEDDLLGITDSGGDTAASGIRTSGVSNAGTEAGV
HGIPEEMRPRLETAFKALITTVSGVLFENDKLQVGIKHDYRGSQGKMVLF
YGNKTSEALTDFAASVTKTFYLQMESQDPPKIVAAGEQAKQSLSMEVMKP
FDYSDAPELLLSYTFQGQKHLYELTLPIVPTSFFEPVTLAAPDYMARWRS
LEGQSRERQEILQQPANFSYDSSALVAFRLKILDGLHLAQAQGLDQNDLS
LSAVGSLRTGTAGPDGGKISVGALLRIEVNAQVRAMRITARAVHGTVAAA
LVNTIKALVT
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Synonyms
Publications