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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100068g10.2436.mrna |
| Orig protein id | gnl|cribi|Naga_100068g10.2436 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:548178..549861 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5675 ID=rna5675|Name=rna5675|organism=Nannochloropsis gaditana|type=mRNA|length=2223bp
TAAACGTTTACGCCACGACATGACGTCTTCGTCCAACTGTCCCAGTACCT
AACGACATGGCTCTTCAGGACAACTTTAAGGATGAAGCCCCCTTTGTCGC
GAGTGGCGTGTGTCAAGTTTCTGCATCCTCGCAATCTATAGAGGACCTGA
GGATACGAAGGGCAAGGCTTCGGAGGGTAACTCATAGCCCATCCGCATAC
CCTGCGAAGATGCGGCTTGTATCAGAGGCACATTTACACATGCCTTCTCA
AATGGTTTCTCTGAGCAACTGCCATGTCGTGCCGTACAGTACCGAGTTTC
ATCGTAGCACGACATTTACTTCATCATTCACAGGCCTCTATCATGACTCG
AGTCTCAGTAGTGCAAGTATGCACGATCAGAGGATGCGGCGCCATGCTAT
CAAACAAGAAGCTCGAATTGAACGACGGCGGACTAAATGCTTGCAAATGC
AATATTTAGCTGCCAAGTACCAAACCAGGTGCGTCCCAGACAATCTTTTT
CTCTGACAAAGTATTTTAGTGATCTGAAACAGACAGACACTCTAATACTT
TTAGGGCGCGAAATTTACGACAACGGCTTCGAGAAGACCGTCAGAAGCAG
TACACATGTCTTCTTTCAGCAGTACGGCGCATTCAAGCTGTTTTTCGTCG
GCGACAGCTCATAAGAAGGAAAAAAGCGGAGGAAGCTCGAGCCAATCAAA
AAGCTGCTCTTGTCTTGTGTGACTTCGGAAGGCGAGTGGTAACCATCATG
GCAGCTAAGAAAGAGTTGAGCAGACGGAGGCATGTTCTACGGTGTGAAGC
AGCAGTCAAAGCAATCAGCACTTGGTGGAGAAAACTTTTGGCAATCCTCC
ATGCAAGGCGTTTGCGGAAAATATTACTAGCAGAAAGACAAAATCGCCAG
GCCCAGTGTAAATTGAATATAGTTCTATTTTGTCAATCGCATTTTAGGGG
ACGGCGGGTACGAAGATTTGTTGCATTACTCAGACGTCAAGAAATGGAGA
GGGCAATAGAAGCGGCAAAATTGGCCGCTGCTCTTGAAGAGGAAAGGGAG
CGCCGACAGCGAAAACGAGGAGAGTTACACGGACGGCCATTCCGATAAGT
TGAATTGAATAGAGAAATGTTTTAATTTTCTATATCCATGTAAAAGTAAA
AATTAAGGTAGCGGAACAAGCTCGCCAGTGATACTCACCGATACGCGGGA
GAATGCGATCGGACGGCTTTCAATGTGCCTTGAAGCAAACATAGTTGCAC
CGTGCCTCCAACGATTCTTGATTGACTTTTTTTTCTTTCTGCGCTGTGCT
TTACCGATTGCCATCGTCGAATCGGTTTGCGTCTTGATCTCATCAATTGG
TTCATGTATCTTCAACCGAGCAACCTCCCACCATCCTTTTTTTCCCCTCT
CCCACACAGCTCTCGTACCCGCTCCAATTGCTTATCTGCTGCGTTGCCAA
AGTCATGTGCCATGGCTGTAAATGTCTCATTGGACCCTCTATGTTGGCCA
GTGACCTGTCATGCATGGCTGACGAGGCAAAAAAGGTGATAGCGGGCGGG
GCGGACTACTTGCACTTGGACGTGATGGATGGCCACTTCGTGCCGAACAT
AACCTGGGGCCCCCCTGTCATCAAGCACTTGCGAAAACACTGTCCAGACA
TATTCTTTGACTGCCATATGATGGTGAGCAACCCGGAGCAATGGGTTCAA
GAGATCAAGGATGCTGGTGGGGACCAGTACACATTTCATTTGGAAGCCGC
TCGAGATCCTGCCGGCCTAATCGAGCAAATCAAGGCCATAGGAATGAGAG
TGGGTATGGCCCTGCGACCAGGCACACCAATCGAGGATGCGCTCCCATGG
GTGGATTCTGTGGATGTGGTGTTGGTCATGACCGTAGAACCGGGTTTTGG
GGGGCAAAAGTTTATGGCGGACATGATGCCGAAAGTGGCGTATTTGCGGG
CCAAGTGCCCAGAGAAGGACATTGAAGTAGATGGAGGCCTCGGCCCTGCG
ACTGTCGATGCCGCTGCCCGAGCAGGGGCAAACATGATAGTGGCGGGTAG
TTCGGTGTTCAACAGTGAAGTTCCTGCGAAAGTCATCGCGGCTTTACGGC
GAAGCGTAGAAAAACTTGGAAATGGAAAGAGCGAGGAGGAGCTGACTCAG
CTCCCATCCTAACAAAGCATTTCAAATGGAAGAGGGACAGCTATATAAGA
AAAATCACAGACATACAGGACAT back to topprotein sequence of rna5675 >rna5675-protein ID=rna5675-protein|Name=rna5675|organism=Nannochloropsis gaditana|type=polypeptide|length=364bp
MEDDRMQRLHDTLDKLRPRGKTGGLGFNSGFGPKKTDDGLPKNGLYAYFV
RAGHGGYKKWGDDDIAEVKPESEGESSLPVRGYIKKEKRKKEKRSKGEDA
SKKRKDILLTASEKQEGGEPPRKRRRQRLEEAVSWEALQNPQAGDATVAG
DIKFSWHKHIKRVLKAAEENKVPLRQLRKQVVALALERTSSRTAKGSVAG
TQSKKALKHAFHRAVDTHDLLHVEDGVVHYRNAEKAVGGAAYGRQKHDVV
TAAKKGAFAMKGEGGSDTEEQREQKRRKSRSGGNNKSAKAVDRVEIAERK
KSLSKAESTERLSTEAAGKDIAFADRAEKKKKKNKKGSALEEEKKKEATS
MNEAKKASGKRNKH back to topmRNA from alignment at CM002466.1:548178..549861- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5675 ID=rna5675|Name=rna5675|organism=Nannochloropsis gaditana|type=mRNA|length=1684bp|location=Sequence derived from alignment at CM002466.1:548178..549861- (Nannochloropsis gaditana)
AAATTTAAAGTACAGCGCGGTGAACCAGTGACTCATTGGAAAAAGAAAAT
GGTCAGTGTCTGTGCTTGATTCGGCGGCAAAAAGCAGCACAATGACAAAA
AGAGAAGAACGACGCATTCGACCTCCTCCCCTCCACTGAACACCTTGGCT
TGCCTTGATCGCATGCGCGTCGTCTTCTTCCCCGCGGCTGGCGTTGATAA
GGCGCCATGTACATGCGCGTCACATATGAAAAGATTGATTCTGTTTCATT
TCTGTCGCTTTTCAGATTGAAGGCCTAGGTTTTGGTCCTTGGTGGCCGCG
AGGATCTTCCTACTAGACAGCCATGGAGGACGACAGGATGCAGCGCCTTC
ACGATACATTGGACAAGCTACGACCTCGGGGCAAGGTAGGGACATGCATG
TTGTTAAGGAACAACACCCTCTCTTCAGTCAGACCATTCGTGGCAACTTC
AGCTCTTGATATTCACGTTGTGCAATTTCTTATTACAAAACAAAGACGGG
TGGCTTGGGTTTCAATTCAGGCTTTGGGCCCAAAAAGACAGACGATGGTT
TGCCTAAAAATGGCCTGTACGCCTATTTTGTGCGAGCGGGTCATGGTGGA
TACAAGAAGTGGGGGGATGACGATATTGCAGAGGTGAAGCCAGAAAGCGA
AGGAGAAAGCAGCTTGCCTGTGCGTGGCTACATCAAGAAGGAGAAGAGGA
AGAAAGAGAAGAGATCAAAAGGGGAAGATGCAAGCAAAAAACGGAAAGAC
ATTTTATTAACAGCGTCTGAGAAGCAAGAGGGAGGAGAACCTCCCAGGAA
GCGGCGACGGCAGAGACTGGAGGAGGCCGTGAGTTGGGAGGCGCTTCAGA
ATCCTCAGGCAGGCGATGCGACGGTGGCGGGAGACATCAAGTTTTCCTGG
CACAAACATATCAAGAGGGTTCTGAAGGCGGCGGAGGAGAATAAAGTTCC
CTTGAGGCAGCTGAGAAAGCAGGTTGTCGCCCTGGCATTGGAAAGGACCA
GCTCCCGAACCGCCAAGGGAAGTGTTGCAGGGACGCAGAGTAAGAAGGCC
TTAAAGCATGCATTTCACCGTGCTGTGGACACCCACGACTTGCTGCACGT
GGAGGATGGAGTGGTGCACTACCGAAACGCAGAAAAAGCGGTCGGGGGGG
CCGCGTATGGAAGGCAAAAACATGACGTGGTGACAGCGGCGAAGAAGGGG
GCTTTTGCCATGAAGGGAGAGGGGGGGAGCGATACAGAAGAGCAAAGGGA
GCAGAAGAGAAGGAAGAGCAGGTCAGGAGGAAATAACAAAAGCGCAAAGG
CCGTCGATCGCGTCGAGATTGCAGAGAGGAAGAAATCTCTGAGCAAAGCC
GAGTCAACTGAAAGGCTCTCCACCGAAGCGGCGGGGAAAGACATCGCATT
TGCAGATCGGGCAGAAAAGAAGAAGAAGAAAAATAAAAAAGGAAGCGCGC
TCGAGGAAGAGAAAAAGAAGGAGGCGACAAGCATGAACGAGGCCAAGAAG
GCCTCTGGCAAGAGGAACAAGCATTGAATTTGCAGCTGGAGATATCATGA
CTTGGAATCTTTTGCATGCTATTTTGAGGCCTCGAGGCAGCCATGTGAAA
AAAAGAGGGAAGAACGGGAAGGGAGACGGAGTAAAGTACAAAAACAACTC
ACAGAAGATGACGAGACGTGAAAAGAATGTCCTG back to topCoding sequence (CDS) from alignment at CM002466.1:548178..549861- >rna5675 ID=rna5675|Name=rna5675|organism=Nannochloropsis gaditana|type=CDS|length=2190bp|location=Sequence derived from alignment at CM002466.1:548178..549861- (Nannochloropsis gaditana)
ACGGGTGGCTTGGGTTTCAATTCAGGCTTTGGGCCCAAAAAGACAGACGA
TGGTTTGCCTAAAAATGGCCTGTACGCCTATTTTGTGCGAGCGGGTCATG
GTGGATACAAGAAGTGGGGGGATGACGATATTGCAGAGGTGAAGCCAGAA
AGCGAAGGAGAAAGCAGCTTGCCTGTGCGTGGCTACATCAAGAAGGAGAA
GAGGAAGAAAGAGAAGAGATCAAAAGGGGAAGATGCAAGCAAAAAACGGA
AAGACATTTTATTAACAGCGTCTGAGAAGCAAGAGGGAGGAGAACCTCCC
AGGAAGCGGCGACGGCAGAGACTGGAGGAGGCCGTGAGTTGGGAGGCGCT
TCAGAATCCTCAGGCAGGCGATGCGACGGTGGCGGGAGACATCAAGTTTT
CCTGGCACAAACATATCAAGAGGGTTCTGAAGGCGGCGGAGGAGAATAAA
GTTCCCTTGAGGCAGCTGAGAAAGCAGGTTGTCGCCCTGGCATTGGAAAG
GACCAGCTCCCGAACCGCCAAGGGAAGTGTTGCAGGGACGCAGAGTAAGA
AGGCCTTAAAGCATGCATTTCACCGTGCTGTGGACACCCACGACTTGCTG
CACGTGGAGGATGGAGTGGTGCACTACCGAAACGCAGAAAAAGCGGTCGG
GGGGGCCGCGTATGGAAGGCAAAAACATGACGTGGTGACAGCGGCGAAGA
AGGGGGCTTTTGCCATGAAGGGAGAGGGGGGGAGCGATACAGAAGAGCAA
AGGGAGCAGAAGAGAAGGAAGAGCAGGTCAGGAGGAAATAACAAAAGCGC
AAAGGCCGTCGATCGCGTCGAGATTGCAGAGAGGAAGAAATCTCTGAGCA
AAGCCGAGTCAACTGAAAGGCTCTCCACCGAAGCGGCGGGGAAAGACATC
GCATTTGCAGATCGGGCAGAAAAGAAGAAGAAGAAAAATAAAAAAGGAAG
CGCGCTCGAGGAAGAGAAAAAGAAGGAGGCGACAAGCATGAACGAGGCCA
AGAAGGCCTCTGGCAAGAGGAACAAGCATTGAATGGAGGACGACAGGATG
CAGCGCCTTCACGATACATTGGACAAGCTACGACCTCGGGGCAAGACGGG
TGGCTTGGGTTTCAATTCAGGCTTTGGGCCCAAAAAGACAGACGATGGTT
TGCCTAAAAATGGCCTGTACGCCTATTTTGTGCGAGCGGGTCATGGTGGA
TACAAGAAGTGGGGGGATGACGATATTGCAGAGGTGAAGCCAGAAAGCGA
AGGAGAAAGCAGCTTGCCTGTGCGTGGCTACATCAAGAAGGAGAAGAGGA
AGAAAGAGAAGAGATCAAAAGGGGAAGATGCAAGCAAAAAACGGAAAGAC
ATTTTATTAACAGCGTCTGAGAAGCAAGAGGGAGGAGAACCTCCCAGGAA
GCGGCGACGGCAGAGACTGGAGGAGGCCGTGAGTTGGGAGGCGCTTCAGA
ATCCTCAGGCAGGCGATGCGACGGTGGCGGGAGACATCAAGTTTTCCTGG
CACAAACATATCAAGAGGGTTCTGAAGGCGGCGGAGGAGAATAAAGTTCC
CTTGAGGCAGCTGAGAAAGCAGGTTGTCGCCCTGGCATTGGAAAGGACCA
GCTCCCGAACCGCCAAGGGAAGTGTTGCAGGGACGCAGAGTAAGAAGGCC
TTAAAGCATGCATTTCACCGTGCTGTGGACACCCACGACTTGCTGCACGT
GGAGGATGGAGTGGTGCACTACCGAAACGCAGAAAAAGCGGTCGGGGGGG
CCGCGTATGGAAGGCAAAAACATGACGTGGTGACAGCGGCGAAGAAGGGG
GCTTTTGCCATGAAGGGAGAGGGGGGGAGCGATACAGAAGAGCAAAGGGA
GCAGAAGAGAAGGAAGAGCAGGTCAGGAGGAAATAACAAAAGCGCAAAGG
CCGTCGATCGCGTCGAGATTGCAGAGAGGAAGAAATCTCTGAGCAAAGCC
GAGTCAACTGAAAGGCTCTCCACCGAAGCGGCGGGGAAAGACATCGCATT
TGCAGATCGGGCAGAAAAGAAGAAGAAGAAAAATAAAAAAGGAAGCGCGC
TCGAGGAAGAGAAAAAGAAGGAGGCGACAAGCATGAACGAGGCCAAGAAG
GCCTCTGGCAAGAGGAACAAGCATTGAATGGAGGACGACAGGATGCAGCG
CCTTCACGATACATTGGACAAGCTACGACCTCGGGGCAAG back to top
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