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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100049g7.2111.mrna |
| Orig protein id | gnl|cribi|Naga_100049g7.2111 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:517152..518205 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5661 ID=rna5661|Name=rna5661|organism=Nannochloropsis gaditana|type=mRNA|length=687bp
ATGAGACGCCGCCAGGTGCACGGGGATGGGGTCACCACGGACAACGCCTC
ATCAACTCCAGCATCAGCCCCTACCACATACGAAGGAACATGGCCAGCCC
CCGCATCAGAAACATCCCCCCCCGCAGCAACTGCTGCTGTGAACGAGGAA
GAGGCGCTACGGGCAAAGGCATTGGGAGTGGACGCCTTGCGACGGGGTGA
TTACGACCGCGCGGCTCGGTTTCTGGGGATCAGCAGTCGCTTACTTCCAG
AAAATGCGGACATTAGAGGGCTTCTCAACTCCGCTTTGGCAGGCCAAGCG
CGAACGGACACTCGACGAGCTTCCGCACACCGTGCTGCGGCGGCCACAGC
CCCACCATGGTCGCCACAACACGTTTCGGGCCGATTCATGAACGGTTTGG
ACGCGGTGCTAGATAAAGTTTGGGCGTCTTTGCCCTCGGCGGGTCAAAAT
CTCATCACACGCTACACCCACCCGTCTATGCGCAAACCTTTGGCATACGT
ATCGATCCTGATAATAACTGCAGCCACCTACCGCTTTGTCTTGCGCGGTC
CACCACTCGTCTTGGGCCATTTGCCGGGCGACATATACTACAATAGCGGA
AATGTCGTGGTCTCCGCCCCGCTTTTCTCCTGCTTCTTGGCCTCCATGGC
CTTTAGCCAAGTAGCTCGTCTCTTCCAGCGCAGGTGA back to topprotein sequence of rna5661 >rna5661-protein ID=rna5661-protein|Name=rna5661|organism=Nannochloropsis gaditana|type=polypeptide|length=264bp
MAIRRGIACSILLFLVAVTHAFVRPAAPSSLQVRKQQHPGPPRGHPEHSG
LKPLQAKGSGPEFGRKQAKRDLMERQRAMAEFNAEIETTPVFQVFAATQK
MKGLWMPVAAFKADNVAKGVVDASLQEGIAANMFKGVYKAQVETAVSKAI
FDNERRLREQGQAMHATLKNAPRDQIIWGFKILYKPLQDKFGKTQQPTVV
TKDMSKSLFDKFKDSVSNKVQETFSLKLEEPAPTTPTPPPAGGGKKKKGG
KKDKSGAAASAASE back to topmRNA from alignment at CM002466.1:517152..518205- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5661 ID=rna5661|Name=rna5661|organism=Nannochloropsis gaditana|type=mRNA|length=1054bp|location=Sequence derived from alignment at CM002466.1:517152..518205- (Nannochloropsis gaditana)
ATGGCCATCAGAAGAGGCATCGCCTGTTCTATACTGCTTTTCCTCGTGGC
CGTCACGCATGCTTTCGTACGACCAGCCGCCCCTTCGTCCCTGCAGGTGA
GGAAGCAGCAACACCCTGGGCCCCCCCGGGGGCACCCTGAGCATTCGGGT
TTAAAGCCTTTACAGGCCAAGGGGTCGGGACCTGAATTTGGACGAAAACA
AGCGAAACGAGACTTAATGGAGAGGCAACGAGCGATGGCTGAGTTCAATG
CCGAAATTGAGACAACGCCCGTGTTCCAAGTGTTCGCGGCCACGCAGAAG
ATGAAGGGGTTGTGGATGCCTGTGGCGGCTTTCAAGGCCGACAACGTAGC
CAAAGGCGTCGTGGACGCGTCGTTGCAAGAGGGCATTGCTGCCAACATGT
TCAAGGGCGTATACAAGGCGCAGGTAGAGACGGCTGTGTCCAAGGCCATC
TTTGACAACGAGAGGCGGCTTCGGGAACAGGGTCAAGCCATGCACGCCAC
CCTAAAGAACGCGCCCAGGGATCAGATCATTTGGGGGTTTAAGATATTGT
ACAAACCTCTTCAGGACAAGGTGTGAAAAAAAAGATGGAGGTCGATAAAG
CGAGAGAAATTGACTCTGTGGGTGGTGCGAGTACACTGGGAAAGAGACAG
GACCATATGACTGGTAGGAGCGAGAATGGCTGATACGTATTGACATCCCT
TCAACTAACGACAGTTCGGTAAGACTCAGCAGCCGACAGTGGTCACCAAG
GACATGTCCAAGAGCCTCTTTGATAAGGTACGCGGTGCTGGAGGGACGCG
GATGAGGAGGGATACAGTGTTGGGAGTTATACAACGAGCAAGGCGTCGTG
AACACCGTGGGTCTCATGCCTTCCTTTCCGTTCCCCTTACAGTTCAAGGA
CAGCGTATCGAATAAGGTGCAAGAGACCTTCAGTCTTAAGTTGGAGGAGC
CCGCGCCCACTACGCCGACACCCCCTCCTGCGGGGGGCGGAAAGAAAAAG
AAAGGGGGAAAGAAAGACAAAAGCGGTGCTGCCGCTTCAGCGGCAAGCGA
GTGA back to topCoding sequence (CDS) from alignment at CM002466.1:517152..518205- >rna5661 ID=rna5661|Name=rna5661|organism=Nannochloropsis gaditana|type=CDS|length=2385bp|location=Sequence derived from alignment at CM002466.1:517152..518205- (Nannochloropsis gaditana)
TTCAAGGACAGCGTATCGAATAAGGTGCAAGAGACCTTCAGTCTTAAGTT
GGAGGAGCCCGCGCCCACTACGCCGACACCCCCTCCTGCGGGGGGCGGAA
AGAAAAAGAAAGGGGGAAAGAAAGACAAAAGCGGTGCTGCCGCTTCAGCG
GCAAGCGAGTGATTCGGTAAGACTCAGCAGCCGACAGTGGTCACCAAGGA
CATGTCCAAGAGCCTCTTTGATAAGATGGCCATCAGAAGAGGCATCGCCT
GTTCTATACTGCTTTTCCTCGTGGCCGTCACGCATGCTTTCGTACGACCA
GCCGCCCCTTCGTCCCTGCAGGTGAGGAAGCAGCAACACCCTGGGCCCCC
CCGGGGGCACCCTGAGCATTCGGGTTTAAAGCCTTTACAGGCCAAGGGGT
CGGGACCTGAATTTGGACGAAAACAAGCGAAACGAGACTTAATGGAGAGG
CAACGAGCGATGGCTGAGTTCAATGCCGAAATTGAGACAACGCCCGTGTT
CCAAGTGTTCGCGGCCACGCAGAAGATGAAGGGGTTGTGGATGCCTGTGG
CGGCTTTCAAGGCCGACAACGTAGCCAAAGGCGTCGTGGACGCGTCGTTG
CAAGAGGGCATTGCTGCCAACATGTTCAAGGGCGTATACAAGGCGCAGGT
AGAGACGGCTGTGTCCAAGGCCATCTTTGACAACGAGAGGCGGCTTCGGG
AACAGGGTCAAGCCATGCACGCCACCCTAAAGAACGCGCCCAGGGATCAG
ATCATTTGGGGGTTTAAGATATTGTACAAACCTCTTCAGGACAAGTTCAA
GGACAGCGTATCGAATAAGGTGCAAGAGACCTTCAGTCTTAAGTTGGAGG
AGCCCGCGCCCACTACGCCGACACCCCCTCCTGCGGGGGGCGGAAAGAAA
AAGAAAGGGGGAAAGAAAGACAAAAGCGGTGCTGCCGCTTCAGCGGCAAG
CGAGTGATTCGGTAAGACTCAGCAGCCGACAGTGGTCACCAAGGACATGT
CCAAGAGCCTCTTTGATAAGATGGCCATCAGAAGAGGCATCGCCTGTTCT
ATACTGCTTTTCCTCGTGGCCGTCACGCATGCTTTCGTACGACCAGCCGC
CCCTTCGTCCCTGCAGGTGAGGAAGCAGCAACACCCTGGGCCCCCCCGGG
GGCACCCTGAGCATTCGGGTTTAAAGCCTTTACAGGCCAAGGGGTCGGGA
CCTGAATTTGGACGAAAACAAGCGAAACGAGACTTAATGGAGAGGCAACG
AGCGATGGCTGAGTTCAATGCCGAAATTGAGACAACGCCCGTGTTCCAAG
TGTTCGCGGCCACGCAGAAGATGAAGGGGTTGTGGATGCCTGTGGCGGCT
TTCAAGGCCGACAACGTAGCCAAAGGCGTCGTGGACGCGTCGTTGCAAGA
GGGCATTGCTGCCAACATGTTCAAGGGCGTATACAAGGCGCAGGTAGAGA
CGGCTGTGTCCAAGGCCATCTTTGACAACGAGAGGCGGCTTCGGGAACAG
GGTCAAGCCATGCACGCCACCCTAAAGAACGCGCCCAGGGATCAGATCAT
TTGGGGGTTTAAGATATTGTACAAACCTCTTCAGGACAAGTTCAAGGACA
GCGTATCGAATAAGGTGCAAGAGACCTTCAGTCTTAAGTTGGAGGAGCCC
GCGCCCACTACGCCGACACCCCCTCCTGCGGGGGGCGGAAAGAAAAAGAA
AGGGGGAAAGAAAGACAAAAGCGGTGCTGCCGCTTCAGCGGCAAGCGAGT
GATTCGGTAAGACTCAGCAGCCGACAGTGGTCACCAAGGACATGTCCAAG
AGCCTCTTTGATAAGATGGCCATCAGAAGAGGCATCGCCTGTTCTATACT
GCTTTTCCTCGTGGCCGTCACGCATGCTTTCGTACGACCAGCCGCCCCTT
CGTCCCTGCAGGTGAGGAAGCAGCAACACCCTGGGCCCCCCCGGGGGCAC
CCTGAGCATTCGGGTTTAAAGCCTTTACAGGCCAAGGGGTCGGGACCTGA
ATTTGGACGAAAACAAGCGAAACGAGACTTAATGGAGAGGCAACGAGCGA
TGGCTGAGTTCAATGCCGAAATTGAGACAACGCCCGTGTTCCAAGTGTTC
GCGGCCACGCAGAAGATGAAGGGGTTGTGGATGCCTGTGGCGGCTTTCAA
GGCCGACAACGTAGCCAAAGGCGTCGTGGACGCGTCGTTGCAAGAGGGCA
TTGCTGCCAACATGTTCAAGGGCGTATACAAGGCGCAGGTAGAGACGGCT
GTGTCCAAGGCCATCTTTGACAACGAGAGGCGGCTTCGGGAACAGGGTCA
AGCCATGCACGCCACCCTAAAGAACGCGCCCAGGGATCAGATCATTTGGG
GGTTTAAGATATTGTACAAACCTCTTCAGGACAAG back to top
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