EWM25052.1, cds5646 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25052.1 vs. NCBI_GenBank
Match: gi|585106688|gb|EWM25052.1| (hypothetical protein Naga_100049g7 [Nannochloropsis gaditana]) HSP 1 Score: 539.65 bits (1389), Expect = 0.000e+0 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
Query: 1 MAIRRGIACSILLFLVAVTHAFVRPAAPSSLQVRKQQHPGPPRGHPEHSGLKPLQAKGSGPEFGRKQAKRDLMERQRAMAEFNAEIETTPVFQVFAATQKMKGLWMPVAAFKADNVAKGVVDASLQEGIAANMFKGVYKAQVETAVSKAIFDNERRLREQGQAMHATLKNAPRDQIIWGFKILYKPLQDKFGKTQQPTVVTKDMSKSLFDKFKDSVSNKVQETFSLKLEEPAPTTPTPPPAGGGKKKKGGKKDKSGAAASAASE 264
MAIRRGIACSILLFLVAVTHAFVRPAAPSSLQVRKQQHPGPPRGHPEHSGLKPLQAKGSGPEFGRKQAKRDLMERQRAMAEFNAEIETTPVFQVFAATQKMKGLWMPVAAFKADNVAKGVVDASLQEGIAANMFKGVYKAQVETAVSKAIFDNERRLREQGQAMHATLKNAPRDQIIWGFKILYKPLQDKFGKTQQPTVVTKDMSKSLFDKFKDSVSNKVQETFSLKLEEPAPTTPTPPPAGGGKKKKGGKKDKSGAAASAASE
Sbjct: 1 MAIRRGIACSILLFLVAVTHAFVRPAAPSSLQVRKQQHPGPPRGHPEHSGLKPLQAKGSGPEFGRKQAKRDLMERQRAMAEFNAEIETTPVFQVFAATQKMKGLWMPVAAFKADNVAKGVVDASLQEGIAANMFKGVYKAQVETAVSKAIFDNERRLREQGQAMHATLKNAPRDQIIWGFKILYKPLQDKFGKTQQPTVVTKDMSKSLFDKFKDSVSNKVQETFSLKLEEPAPTTPTPPPAGGGKKKKGGKKDKSGAAASAASE 264
BLAST of EWM25052.1 vs. NCBI_GenBank
Match: gi|551554495|ref|XP_005764480.1| (hypothetical protein EMIHUDRAFT_311445 [Emiliania huxleyi CCMP1516] >gi|551556010|ref|XP_005765157.1| hypothetical protein EMIHUDRAFT_371257 [Emiliania huxleyi CCMP1516] >gi|551627071|ref|XP_005793525.1| hypothetical protein EMIHUDRAFT_372733 [Emiliania huxleyi CCMP1516] >gi|485614195|gb|EOD12051.1| hypothetical protein EMIHUDRAFT_311445 [Emiliania huxleyi CCMP1516] >gi|485615038|gb|EOD12728.1| hypothetical protein EMIHUDRAFT_371257 [Emiliania huxleyi CCMP1516] >gi|485648170|gb|EOD41096.1| hypothetical protein EMIHUDRAFT_372733 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 71.2478 bits (173), Expect = 2.523e-11 Identity = 42/147 (28.57%), Postives = 81/147 (55.10%), Query Frame = 0
Query: 76 QRAMAEFNAEIETTPVFQVFAATQKMKGLWMPVAAFKADNVAKGVVDASLQEGIAANMFKGVYKAQVETAVSKAIFDNERRLREQGQAMHATLKNAPRDQIIWGFKILYKPLQDKFGKTQQPTVVTKDMSKSLFDKFKDSVSNKVQE 222
Q+ E +A + TP+F ++A K + +W PV+ + D +KG+V A L +A KGV+K +++ V+++IF++ERRL + + + +K P + WG+KI+ + K + P + ++K L ++S ++K Q+
Sbjct: 61 QQEFREPDAPPDGTPLFYLYARNPKTRVMWYPVSVLRGDGQSKGLVGAWLGSPLA----KGVFKERLDEGVARSIFESERRLTDMARQQYPAIKKLP--SLEWGYKIVATGVSTAVAKGELPEQKVQMVTKELMQ--QESWADKAQK 199 The following BLAST results are available for this feature:
BLAST of EWM25052.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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