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Properties
| Property Name | Value |
|---|
| Product | tpr-repeat protein |
| Orig transcript id | gnl|cribi|Naga_100310g7.1344.mrna |
| Orig protein id | gnl|cribi|Naga_100310g7.1344 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1400294..1402423 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna566 ID=rna566|Name=rna566|organism=Nannochloropsis gaditana|type=mRNA|length=3272bp
ATTTCAGGCACTTGACGTGGATCGTATGCTTCGTCAGAGAAGCAAGGGGC
TGCTGGAACGAGTGCGTTGAGATCGCTGGGGTAAATTTATCAGCTCCACT
TGTCTGGTCGACCTGCAGCTTCCTTATCACCTCGTGATCGCCGCGCCTCG
CACACCCCCCCTTACTCGTGGCTAGTTTTTGCGGTACGAACTCGGCATTG
GCGACGTCACCACAAGCATCGATATTTTGTGAAACAGAAACAGGTGGCTG
GCGCCAGTCAGTTTGAGGAGATGCGCGTTAGGCATAACCAGCCTGCCTTA
AAGCGCTCGAGACTCCTCTTCCTCCTCGTTTTCCTGGTCATCCTTCAAAG
CACTTCGTCCTATCAGAGCACGGCAGCTCACCATACATATTGCCCATCAC
CCTGTAAATGGCTGGTCACGGTTCGAGGCGGTATCGGTAATGCAAGCTCC
CCAGCCCTTCCTTCCCCTGCAGGCATCACTCCTCCCACGACCTCAATAAC
CTCCCCTGTCCCGTGGGGGCCGCCCTCCACCTCCTCCACTGCAAGGCTCA
CGGGCAGTCGGGCTTTCCGCCAGCTGCACATCACCAAAGATGTCCTCGTG
CTAGAATCGAGGCTGAGCAACGACGTGGTTGTCATTTCTAGAACCCTTTC
CTCCGGCAGCGACCCTCTGCGCGTGAGGAAGCAGCCCCGGACAGACCCCC
TCCCCCCTCCCTCTCCCTCGTCCTCCGCCCCTTCCTCCCCTCCCTCCCGC
TCATCCTCCTTGCCCATTGAAGGTGTGTACGGCTTCTTCCACCTGCCTTC
CGGTCCATACCTGGCGGTGATCACGGGCTCCGAGGAGAGGTATCGGGGCC
ACGGGATGGAGCTTCGTCTGATTACCAAGGTAACCCTGATCAGAATCAGT
AGTGCTGGCGTCAACAAACGTCGTGACATTAGGACCCATGACAGTGTTGG
GACCAGCAGCCTGAACGGCAGCGGTGGACGAGTGAGGCCCGAAGGGGAGG
GAGGGGAGGAAGGAGGGGAGGAGGGAGGGGTAGAGGGAGTGGAGGGGAGG
AGGAAGGTCAAGACGACAGAGACTTCGGCAATCACATCAGGCGACCAGGG
AGAGATAGAAGAGGAGAGGCTCGTAACGGGTCCCGAGATGGGCGTAGATT
TCGACGAAGAGAAGGACCAAGGGATGGGGGATGCAGGGGCAGCCGGGGAG
GAAAGGCAGGAGGAGGAGGAAGCTGATGCCCGGCACTTGGCGTTGCTGCG
GATGGCCTTCCGGACCCATGACCTGTATTTCTCGTCCACGTGTGACGTGA
CCCTTACAGCGCAACGCCGTGCCGATCTTTTGAAACCCCCTTCTCCCTCT
TCCTCCCCCTCCTCCTCCTTCCCTTCCTCCCTCCTCCCCGGCGCAACGCC
CGCCCGTCCCAAGGCGCGGAAACTCCTCTTGCCGCTGTGGCAACGGGCGG
ACGACCGTTTCTTCTGGAACCGACCGTTACTCCAGCCGTTGGTTGAGGCC
GGGGCGGATGAATGGGTGCTGCCGGTGATGAGCGCCTACGTGCAAGCGGT
TCGGAACGTGTCGTGGACTGAGGGCGAGAGGGAGGGCGGGAGGGAGGGCG
GGAGGGAGGGCGGGACGCTGGTCCTGATCTCACGACGGAGCTGTCGGCGG
CAAGGAAGGCGGTTTGTAAAGAGAGGAATAGACTCGGAGGGAGACGTGGC
CAATTTCGTGGAGACGGAGCAACTCTTGATCGCGCCGCGCAAGGGAGGGG
CAGGGCGGGAGGGAGGGAGGGGGGGAGGGAGCGGGGGAGGATTGACATCC
TTGGTGACGGTTCGAGGGAGCCTTCCCTTGCTGTGGTCCAGCCCCGCCAA
TTTGAAGTACACGCCCGCGGTGCATTTGCACGGGACCGTAGAGGCCAACG
TCCGGGCGATGGCTCGGCATTACGGAGATATGTTGGGCCGTTACGGGGTC
GGGGAGACAGGAGGGGAGGGGCCAGGTGGGGTCCCGGGGGTGACGTTGGT
GAACTTGATCGATAAGAAGAAGGTTCAGGGGAGGCTGGGCTTGGCATGGA
GAAAAATCCACGCCCTGGTCATGGGCGTGCTGGAGCGTCCACAGACGGGC
CGTCCCTTCCTCCCGCCCTCCCTCCCGCCCTCCCTCCAGCCTTCCCGCGT
GGCCATGACCTGGTTCGATTTCCACGCAGAATGTGCACAGATGCGGTGGG
AGCGTCTGGGGCTCCTTTTGCACGCCCTCCGTCCCTCCCTGGAGGGCCAA
GGCTTCTTCCACATGGACGCTGCGGGCCGTGTGGAACGGCGGCAGGTAGG
GGTGGTACGGGTGAACTGCATGGATTGCCTTGACCGGACCAACGTGGTGC
AAAGCGTCTTGGCACGCTGGTCCTTGCGACGGCAGGTGGAGGCATTGAGG
GAGGGAGGAGTCGAGGACGGGGAGGAAGGAGGGAAGGGAGGGAGGGAGGG
AGAGGAGGAGGTCTTGAAGTTGCCCTACCCTGGCTTGGAAGCCGCCTTTC
GTTTGTTGTGGAGTGGGAACGCCGACGCCCTCAGCGTCTTGTACGCCGGT
ACCCCCGCGTTGAAAGGCGACTACACGCGCACGGGGAAGCGGACAAAGAC
GGGCATGGTGGCGGACGGCTTGAATTCCGCCAAGCGGTACGTGATCAACA
ATTTTGTGGACCGGGAGAACCAGCAGGCGGTGGAGATTTTGTTGGGGAAG
GAGGATGGGAAGGAGGGCGGAATGGAGGGATGGGTGGTGTGGCCGGCGGA
GGAAGGGGCGGAGGGAAGTGGAAAGGAGGGGAGCGAATGGAGAAGGGCGG
TGGTGGCCGGTGGAATCGTCGCCAACGAAGAGATGCTGGGTGAGAAACTC
TCTGAGGTCGTGCCACCTCTGCCGAAGGAGGGGGAAAGCGAGGGAGGGAG
GGAGGGTGATGGAGGACTGGACGTGGGGGTGGGACGGGAGGATGATGCAG
CGGATGTTCATGGAATGGAAGAGGGAGAAGGTCAGGAAGGAGTGGGAGGA
AGGATAAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCT
GGGATGGGACGTGTACACCAACGAGAATTTGGCACGCGACGCCGCAGCCC
ATGCTGCACAAGGATAAGGGAGAAAAGGGGGGGCACAGAGGCTGGAATTG
TAGATATGATGGACTAGAAAGGTGAGTGGTAGCACTCGAATAGTTGAAAG
TAGAATTTCCCGCCGATCCAGTCCACTCGATCGCGTGGTGCTCGTCCAGA
AAAGCAGCCGCAAACCATCGCG back to topprotein sequence of rna566 >rna566-protein ID=rna566-protein|Name=rna566|organism=Nannochloropsis gaditana|type=polypeptide|length=425bp
MHYPRPHHVNSHQIIMPWSRRRRTSLKRRPYLVLVLASSMLVSKSGAFQH
HGVLRTSGVTTLPSESSSRVITPKAPSALLSCAQQDVQTKKRPFYSRLEV
FNALSTGNVHQAFVKISILLLGSSFADPFLLSPLPAMAADPSRAQIQQVQ
RAFQAFNDRDLRNAEALFDQSVQAWEQLERPRDEMAALVKARGNVKVDLK
KFEAAIEDFDRVLSIMSVDGTKTDGSGEAAYSEYPDVFVQRGLAWEGLSK
WEAAVQDYSRAIQLWGGGRGEGINPFVLTFRGNALTRLGRYKDALQDFEA
SADLFLASRDEEDALLARANAALTYYELGYEETGVKLMQDVLRRQPGFVD
VHVALAAHAWGEGNLGRAEKEWRFACEQTTTGCASYRDLDFVQRIRRWPP
SLVKKLEGFLAKSKVVAGGGSSVLR back to topmRNA from alignment at CM002455.1:1400294..1402423- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna566 ID=rna566|Name=rna566|organism=Nannochloropsis gaditana|type=mRNA|length=2130bp|location=Sequence derived from alignment at CM002455.1:1400294..1402423- (Nannochloropsis gaditana)
AGATGGTTTTAAAATGAGTGTACCAAAATGTGAATTCCATTTTTTCCATG
CATGTCAGAAGAAGGAGACATTCCAAATTCTGTGGCATTGCGTCGCACAG
AAATTCGTGTTCAATGACGGGAGGCTGGGTTGTCTGGCTAGAAAGGTGTC
TGCGACGTTCTAATGTAAGGGGGGGAGGTTGCAGCGCATTCTCCCACTGG
GTCAGCATCCCAACGCTGCAGTTTGCTTTAGCTCCCTGTGCTTAAAAACC
ACCCACAGGACATCGAAAGAAAGGCTGATGACAATGTAGCGTCGACAGCG
CGGAGCGTATAACGTTTCGTGCTGTTTCTAGCCCTTTTGGCGCCATCAGC
AGCAAACCTCCTCTTATTTATGCATTATCCACGTCCACACCACGTCAATA
GCCACCAAATTATCATGCCCTGGTCCAGACGGCGGCGTACTTCTCTGAAA
AGGCGACCCTACTTGGTTCTGGTGCTTGCGTCTTCCATGTTGGTGTCCAA
GTCTGGTGCTTTTCAGCATCATGGCGTGTTACGTACTAGTGGAGTTACTA
CCCTGCCAAGTGAAAGCTCAAGTCGAGTGATAACACCAAAGGCGCCATCC
GCCCTTTTATCGTGCGCCCAACAAGATGTACAGACAAAGAAACGGCCTTT
CTACTCTCGTCTCGAAGTGTTCAATGCTTTATCCACGGGCAACGTCCACC
AAGCCTTTGTTAAGATCAGCATCTTACTCCTCGGTAGCAGCTTTGCCGAT
CCTTTTCTCCTCAGCCCTCTCCCGGCGATGGCGGCAGACCCTTCGCGGGC
ACAAATCCAGCAAGTCCAACGTGCCTTTCAAGCCTTCAATGACCGGGACC
TGCGGAACGCCGAAGCCTTGTTCGACCAGTCGGTCCAAGCCTGGGAGCAA
CTGGAACGGCCGCGGGACGAGATGGCGGCCTTGGTCAAGGCCCGTGGGAA
CGTGAAGGTCGACCTGAAGAAATTCGAGGCGGCGATCGAGGATTTTGACC
GGGTGCTCTCCATCATGAGCGTGGACGGGACCAAGACGGACGGCAGCGGG
GAGGCCGCCTACAGCGAATACCCGGATGTATTTGTGCAACGGGGACTGGC
ATGGGTGAGGGAGGGAGGGAGAGAGGGAAGGGGGAAGGTAGGGAGGGAAA
GAGAGAGGGAGGATAGGAGGGCAGGAAACGGGCCTGGATGGTCCAGGATG
GAGAGTGGAGGAGGGTGGGAGGGGAGGGAGGGAGGGAGGGGGCGGGGACG
GCATGGAAGAGGGATGCGTCAGGTCCTCGGACACAAATGCAACACTATTC
CGACGTGACGTCACGAGATCTTCCTGATCCACTCATCCAATCGCTGCCTC
CCCTCTATTTTCCTTCGACCAGGAGGGGCTGAGCAAGTGGGAGGCAGCCG
TCCAAGACTACAGCCGGGCCATCCAACTCTGGGGAGGGGGGAGGGGGGAG
GGTATCAACCCCTTCGTATTGACCTTCCGAGGGAACGCGTTGACCCGACT
GGGCAGGTACAAGGACGCCCTCCAGGATTTCGAGGCCTCGGCCGACTTGT
TCTTGGCCTCCAGGGACGAGGAAGACGCCTTGCTGGCACGGGCCAATGCG
GCCCTCACCTACTACGAGCTGGGCTACGAGGAAACGGGGGTGAAACTCAT
GCAGGACGTCCTCCGGCGGCAGCCGGGCTTTGTGGACGTGCACGTGGCCC
TGGCGGCCCACGCTTGGGGGGAAGGAAATTTGGGGAGGGCCGAGAAGGAG
TGGCGGTTTGCCTGCGAGCAGACGACGACGGGTTGTGCCTCCTACCGGGA
CTTGGACTTTGTCCAGCGGATACGGCGGTGGCCGCCGTCCTTGGTGAAGA
AACTGGAGGGCTTCTTGGCGAAGAGCAAGGTGGTGGCGGGGGGCGGGAGC
AGCGTGTTGAGATGAATGCCCCCGGGGGCGGGAGAGGAGGGGGGGAGAAG
GAGGGTGAAGAAGTGAAACGGGAAGGAATCAAATCGTAAAATGTCAGGAT
TGAGGCGACTAACGGATAAAGCTTTCAACGCGATGGTTTGCGGCTGCTTT
TCTGGACGAGCACCACGCGATCGAGTGGACTGGATCGGCGGGAAATTCTA
CTTTCAACTATTCGAGTGCTACCACTCACC back to topCoding sequence (CDS) from alignment at CM002455.1:1400294..1402423- >rna566 ID=rna566|Name=rna566|organism=Nannochloropsis gaditana|type=CDS|length=2556bp|location=Sequence derived from alignment at CM002455.1:1400294..1402423- (Nannochloropsis gaditana)
GAGGGGCTGAGCAAGTGGGAGGCAGCCGTCCAAGACTACAGCCGGGCCAT
CCAACTCTGGGGAGGGGGGAGGGGGGAGGGTATCAACCCCTTCGTATTGA
CCTTCCGAGGGAACGCGTTGACCCGACTGGGCAGGTACAAGGACGCCCTC
CAGGATTTCGAGGCCTCGGCCGACTTGTTCTTGGCCTCCAGGGACGAGGA
AGACGCCTTGCTGGCACGGGCCAATGCGGCCCTCACCTACTACGAGCTGG
GCTACGAGGAAACGGGGGTGAAACTCATGCAGGACGTCCTCCGGCGGCAG
CCGGGCTTTGTGGACGTGCACGTGGCCCTGGCGGCCCACGCTTGGGGGGA
AGGAAATTTGGGGAGGGCCGAGAAGGAGTGGCGGTTTGCCTGCGAGCAGA
CGACGACGGGTTGTGCCTCCTACCGGGACTTGGACTTTGTCCAGCGGATA
CGGCGGTGGCCGCCGTCCTTGGTGAAGAAACTGGAGGGCTTCTTGGCGAA
GAGCAAGGTGGTGGCGGGGGGCGGGAGCAGCGTGTTGAGATGAATGCATT
ATCCACGTCCACACCACGTCAATAGCCACCAAATTATCATGCCCTGGTCC
AGACGGCGGCGTACTTCTCTGAAAAGGCGACCCTACTTGGTTCTGGTGCT
TGCGTCTTCCATGTTGGTGTCCAAGTCTGGTGCTTTTCAGCATCATGGCG
TGTTACGTACTAGTGGAGTTACTACCCTGCCAAGTGAAAGCTCAAGTCGA
GTGATAACACCAAAGGCGCCATCCGCCCTTTTATCGTGCGCCCAACAAGA
TGTACAGACAAAGAAACGGCCTTTCTACTCTCGTCTCGAAGTGTTCAATG
CTTTATCCACGGGCAACGTCCACCAAGCCTTTGTTAAGATCAGCATCTTA
CTCCTCGGTAGCAGCTTTGCCGATCCTTTTCTCCTCAGCCCTCTCCCGGC
GATGGCGGCAGACCCTTCGCGGGCACAAATCCAGCAAGTCCAACGTGCCT
TTCAAGCCTTCAATGACCGGGACCTGCGGAACGCCGAAGCCTTGTTCGAC
CAGTCGGTCCAAGCCTGGGAGCAACTGGAACGGCCGCGGGACGAGATGGC
GGCCTTGGTCAAGGCCCGTGGGAACGTGAAGGTCGACCTGAAGAAATTCG
AGGCGGCGATCGAGGATTTTGACCGGGTGCTCTCCATCATGAGCGTGGAC
GGGACCAAGACGGACGGCAGCGGGGAGGCCGCCTACAGCGAATACCCGGA
TGTATTTGTGCAACGGGGACTGGCATGGGAGGGGCTGAGCAAGTGGGAGG
CAGCCGTCCAAGACTACAGCCGGGCCATCCAACTCTGGGGAGGGGGGAGG
GGGGAGGGTATCAACCCCTTCGTATTGACCTTCCGAGGGAACGCGTTGAC
CCGACTGGGCAGGTACAAGGACGCCCTCCAGGATTTCGAGGCCTCGGCCG
ACTTGTTCTTGGCCTCCAGGGACGAGGAAGACGCCTTGCTGGCACGGGCC
AATGCGGCCCTCACCTACTACGAGCTGGGCTACGAGGAAACGGGGGTGAA
ACTCATGCAGGACGTCCTCCGGCGGCAGCCGGGCTTTGTGGACGTGCACG
TGGCCCTGGCGGCCCACGCTTGGGGGGAAGGAAATTTGGGGAGGGCCGAG
AAGGAGTGGCGGTTTGCCTGCGAGCAGACGACGACGGGTTGTGCCTCCTA
CCGGGACTTGGACTTTGTCCAGCGGATACGGCGGTGGCCGCCGTCCTTGG
TGAAGAAACTGGAGGGCTTCTTGGCGAAGAGCAAGGTGGTGGCGGGGGGC
GGGAGCAGCGTGTTGAGATGAATGCATTATCCACGTCCACACCACGTCAA
TAGCCACCAAATTATCATGCCCTGGTCCAGACGGCGGCGTACTTCTCTGA
AAAGGCGACCCTACTTGGTTCTGGTGCTTGCGTCTTCCATGTTGGTGTCC
AAGTCTGGTGCTTTTCAGCATCATGGCGTGTTACGTACTAGTGGAGTTAC
TACCCTGCCAAGTGAAAGCTCAAGTCGAGTGATAACACCAAAGGCGCCAT
CCGCCCTTTTATCGTGCGCCCAACAAGATGTACAGACAAAGAAACGGCCT
TTCTACTCTCGTCTCGAAGTGTTCAATGCTTTATCCACGGGCAACGTCCA
CCAAGCCTTTGTTAAGATCAGCATCTTACTCCTCGGTAGCAGCTTTGCCG
ATCCTTTTCTCCTCAGCCCTCTCCCGGCGATGGCGGCAGACCCTTCGCGG
GCACAAATCCAGCAAGTCCAACGTGCCTTTCAAGCCTTCAATGACCGGGA
CCTGCGGAACGCCGAAGCCTTGTTCGACCAGTCGGTCCAAGCCTGGGAGC
AACTGGAACGGCCGCGGGACGAGATGGCGGCCTTGGTCAAGGCCCGTGGG
AACGTGAAGGTCGACCTGAAGAAATTCGAGGCGGCGATCGAGGATTTTGA
CCGGGTGCTCTCCATCATGAGCGTGGACGGGACCAAGACGGACGGCAGCG
GGGAGGCCGCCTACAGCGAATACCCGGATGTATTTGTGCAACGGGGACTG
GCATGG back to top
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