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Properties
| Property Name | Value |
|---|
| Product | coiled-coil domain-containing protein 130 |
| Orig transcript id | gnl|cribi|Naga_100049g17.2094.mrna |
| Orig protein id | gnl|cribi|Naga_100049g17.2094 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:489719..490953 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5649 ID=rna5649|Name=rna5649|organism=Nannochloropsis gaditana|type=mRNA|length=4914bp
ATGTTTCCGGGATCTCCCCGGCTCAAACTTTCTCTGCCGCGCGACTTCAC
TTTCTCTCCACCTCTGGAGTTGAAGGGCGAGAAAGCAGGCATCATGCAGC
CACCGCAACAAAATCTGCCAACTCAAAGGTCGCACGGGCAAAGTTCTCAT
GCGCAGTCACCGTCAAGATTACCTGAAAGCTCAAGTGCACACTCAGTCCG
CCGTTCAACTGCAATTAATCCTACATCCTCCAGCACCAAGAAGAGGGGGC
GCCAGAACCCATCGACACGGCGAAATTTACTGCCTAAGGATTTTTTACAG
GACTATGCACTCCCTCGAGGCGGTGAATTGGGTCGAGGCGCATTTGCCGT
CGTGCGTCGGTGTACGGAGAGGAAGACAGGCTTGGAGTGGGCGTCGAAAA
TCACCGACCTCCGCCCGATCAAAATGAGGGGGGGCTCGGACATGCGCGTG
GACAGGGTGATGCGGGAGGTTTCCATTCTCAAGAGCATTTCACACCCTAA
CATTGTCAAACTGCACACCGTGTACCAGAATGCCACGACACTGGTAATTG
TTATGGAATTGGTCCGAGGAAAGGAGCTCTTTTTCGAAATTTTAGAGCGC
AATCATTACAGCGAAGCAGATGCCCGCCCTATTTTCGTCCAACTTGCAGA
AGCGCTGCGTTATTTGCACAGTCGCAACATCGTGCATCGGGACGTCAAGC
CAGAAAATGTCCTCCTTGCGTATCCGAATTTCGGCTCTGACCCCTCGACA
GCCGCTGATGGCTCAAACGCCGGGTCCGAGGGCGGTTGCGAGGGAGGAGG
AAGGAAGACCAAGAAATCCGAGGGCGTGATTGTGAAGCTATTAGATTTTG
GGCTCTCCAAACTCATCGATCCAAGGGAAGGGGGCAGCGTCGCCAACACT
TTTGTCGGGACGCGGGCGTACCTGGCGCCGGAGGTGGAGCTCCTGGCCCA
TGGCCAGGGGAAAGCCGCAGGATTCCCAGCCGACTGCTGGTCTCTCGGGG
CCGTGCTGCACGTGATGCTGGTGGCGAAATTCCCCGAGTTCGACGTGGTG
CACCGGATGGACGAGGACGGGACCCTGACCCCGTTCAGCGGGGTGCTCAA
GGTGGAGGGCCTGGGCCTCTGGGACCATCTGAGTCTGGCGGCCAAGGACA
TCATCAAGAGGCTCATGACCCCGAACGCGGCGAAACGCCTGACGGCTGCA
CAGGCATTGGAGCATCCGTGGGCGAAAGGCATGGATTGTCTTCCTCCAGA
ATTCTATTCCGTCGCGCAGGGACAACCGGCGCAGTATCAGCAACGCTTTC
CTTGTGGCGAAAAATATGCGCATCACCCCCAGGTGCTGCAACAGCACCAC
GCACAGCAACCTCCACATCACCATCAGCAGCCACAGCAACAGCAACAGCG
ACATCGGCAGCAGCAACAACGACAGGAGCAAGAGGCTGCGCGCGACCGCC
CCCCAGCCAGGCACCAGCGACCGCCACATCCACAGCAGGAAACAGAGCAG
CAGCAGCAGCATCACGCACAAAAACACCTGTGGCGGCAGCAACAGCAGCA
ACAACTACGAATACAGCTGCAGCAGCAACAGGAACAGCACCAAGAAATGC
AAAAAAGGCTCCGGCAGCAAGAGCAACAAGAAGAAAAGCAAAAACAACGA
AAACAAGAGCTTGGGCAACAGCGACCGTCGGGAGACCCATATGCCTCTGC
GAGCTCTGTCCGCACGCAGGAGTCAACGAGCACGGTTGCCCATGCCAGCC
GCCCGGGCTCTTACATGGAGGAGGGACGTGTCAGCAGCAGCAATGTCGAG
TCCCTCGAAAGCCATTCTGGCACTCTTTCCGCAGGCACCGTCCGACCGCA
CAGTGCAGGACCCGATGCATCCCCCTATGCCGCGACGCGAATGACAAGTC
CTGACGCTGGTGGTGAGTCTCTGCCACCCTCCCGTCCGCTGAACATGGCC
ACGGATCCCATTGCCACGGCGCCAGTCGAGGTTCGCCTGGGGCTACTGGT
GAAGGTGCAACGTTGGATTGCCCAGTCACTGGGGGTGGCTTTTGATCTAA
TGCTCTCAGAGAAGGGCCGCGTTGCCTCCGACGTTGCCTACTGCGTGCGG
ACGGGGGCGGTGGTGTGTCGATACGAGCTGCATCTGACCGTAAAACTGTT
GCGGAAAGTACACGAGGTCGCCGCATTGGTGCTTGCCATCTTTCCCGATT
TGACCTTGGCCTTGAAGGAGGGCGAGTTGAAGTTGGCCCAGTCCTTCTTC
CTCTCCATCCGACAATGGCTGAGTGAGATTCGGAAAGAAGTACAGGACGT
GCAGCGGTCCAACGAGACGGCCACGCTGCAGATGTCGAGGATCATCAAAA
AGGCAGCCAGCGAGTTGGTGGGGAGTCACAAGCTCGTGCAGTACCGGGAA
CGCGAGCGGCGCAGTAAGAAGTGCATGGCTGCAAGAGGTTGTGTCAGTGG
GAAGGGCATTGGCTTGTCGACGCAACAGGGAGACGTTAAGCCTCAGGACC
CGGCATGTCCTGAGAAAGATCTTGAGGGAGGGGGGAAGCACAAAAAGCTG
CGTCGCAAAGATGATGGGCAACTTGCTGAAACAGAAGCAACGGGAATGGC
TGAGGAAATCGCTTCAAAGCCTGAAGAGATAGACATCAATGCAATCAATG
AGGCAGTGGACAAATCGCTAGAGAGCGACACGGCGCTTGTGGACGACCGG
ATTCTAGAATCACTCCTGCCATCTGTGCATTGTGATGAAACCTACGCCAT
CGAGGGAGAGTACGACGCCAAAGTTGACGAATTGGCTCACGTCCTAAATG
ATTTGCTCCCCGCCGAGGCGGTGGAGCCGCTACGGGTGATAGGAGAGACA
GCAGGCGCAACACGTCAACTTGAGGATAAGCAGATCAGCCAAGTAATCGT
GTGCCTGCAGCGGCTGGACCGGATTCTCGAAAGGTTGGATTCTTTCTGGG
CCCGCTGCGAGGTGGACTTGGATTTAATGATACGGCGAGGGGAACACATC
CGGAACCTGATCTCAAATGCTCATAGCCCAGAGACGGTCGCCAGGCTTAA
TGCTCGCTTGTCGGAGTACGCTGTCTTTTGGAGCCGTGTCTCTTCGGCAT
GTGAGCGATACTTGAATGGGGTATCAGAAACGACTGTGGCAACGTTATAT
GCTTTCATGGAAAAATACAACTTCGAGGACCAGATGGACATGCATTTGCC
GCCGGCAGACGCGGAGGGTATTACTGCAAGACGGAGCTCAAACACCGATC
ATAGCACGGCAAGTTGTGCGAGCTTTGACATGGACCAATCGGCAGAGGTG
GGCAGAGTCTATCGAGAAAGGTGTGCGGCGACACCAGCCTCTTTGTTGGA
TTTATTAGACGTATCTTATATCATGCGCGCTAGATCAAGCGCTACGCTTT
TCCTTGTATCTGCCAGTTACTTATCCAGAACTTTACAGTTTGTTGCTTCA
ACTATCTATTCAACGAGCATACACTCGTGGGCGACATTTAAAAAAACATG
TACTCCCATTAAACTTCGCAAAATATTCAATGTAGTCATTCTGGATTTTT
TGGGGAAAGTGAAGCAAGAGTTTTTCGCTACAGTGCGCTACATTTATATG
ATGCAGGGGGATCCGATCTTCATAAAGATGCTTAATTTGATGAATGACAT
CATGCACTTGCCCATCGTTGATGACATTGCATGGCATCTATACCATTTTG
TCCGCCTTTTGCTGGGCCCTCTATGGGCTTTAGGGTTGCTTATCTCCTTT
CTTGTGAAGCTACTCAGTGGTGCCCTGGTGACTCGTCTGGAGCAACCAAA
AGGCCGAGCTGTCCTGATTACCGGATGTGATACGGGGTTTGGGTATGATC
TAGCAATTGCTCTCGTGAAGAAAGGATGGAGAGTCTACGCTGGCTGTCTG
ACACAAGCCGCAGTCGCGGAACTGAAGACCAAAGCAGCAGGCAGTGCAGG
GAGTATGGTATCGGTGCTCATGGACGTCACTAAACAGGCAGATATTGACC
GTGTAGTGGAACAAATTGCAAAAGAGTCTCCCAAACAGCTTTTTGCCGTC
GTATGCAATGCAGGAGTGGGCCGAGGAGGGCTGGTGGACTGGACGCCTCT
TGCTACATACAGGGCCATCATGGAGGTGAATCTTTTCGCCATGATTGCCA
CTTGCAAAGCCTGCTTGCCTTTACTCAAGGAAAGCAAAGGCCGGATTGTC
AATGTCACGAGCATGGCCGGTATTTTCCTCGGTGCCCCATGCATGAGTGC
GTACGCTGCTTCGAAACACGCCGCCGAGGCTTTCAGTACCTCGCTTCGCT
TCGAGCTGGAAGGGTGGGGCATACGGGTCGTGACTGTCAATCCCTCGTTC
CACCGGACTCGTATCTCCACCAACGCTGCCGAGACAGTCAAACAGGCGTA
CGATGACCTGGACGCGAAGACGCAGGCCGAATACGGCCTTGAATACCTGC
GTGCTGTTCAGAAGCTGACTTCTGACCAAACAGATGGTTGTTGGGATCCG
AGACATGTGGTAAATACATTGGTGAGAGCGACGACTGCCGTGTCGCCAAG
GACGCAGTACATTGTCGGTGCCGACGCTACTTTCTGCCTTCTGCCCCTCA
TGAACCTCCCCACACCGGACATCGAGAAAATTGTTTCTTTTACTTTGCTA
CAAAACATGGCGGCAGATAAGAGCAACTGCAAGAAAGAAGAATCTTGTCG
GTCTCTCCCGCAGATCATTATTGATAGAAGCTCAAGGATCTCTTTCGTGA
ATCATAATCATAGCAAGAAAATTGTGCGTCAGTCTATGAAATCTTGCCGG
AAAGCTTCAGGTGAGAGGAGAATAGTCTTGTTTACTACCAGACGTAAAAC
GAATTATACAACACCAGTGGACTTTCAAGGTTACTTATGTATTTTTTACC
CTGCCTCTGCATAG back to topprotein sequence of rna5649 >rna5649-protein ID=rna5649-protein|Name=rna5649|organism=Nannochloropsis gaditana|type=polypeptide|length=360bp
MSSLAAAQADGYYRPPDWDGKSSLKKITGSKGHNQYTQSGIIRFELPYNS
WCLKCDRHIGKGVRFNAKKIQAGNYFSTKIWEFHMKCASCKNRLVIRTDP
KNCDYEFVEGIRRREQEYDPEAIGLPVLSAEPTGASDLAGAATTPSSANA
PNGGVSADPLAALERGKDQIRRTNAAAARLQELMEASDRLEADSSGVNRL
LRNKFRAEKKVLEDLDRESAEKGLRFRLLPPSAEDARMAPMALLEGGTGG
LTRARREGFHKAARTKLTSIMSSSIFDDPGAGRRSSSGSSALVVGSKRGD
PTKRSKAVLNAETQKDLAVKRARLGIDSSHFKASQAANASTSALLMVPFA
PTRRKERRKS back to topmRNA from alignment at CM002466.1:489719..490953- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5649 ID=rna5649|Name=rna5649|organism=Nannochloropsis gaditana|type=mRNA|length=1235bp|location=Sequence derived from alignment at CM002466.1:489719..490953- (Nannochloropsis gaditana)
ATGTCCTCTTTGGCAGCCGCGCAAGCCGATGGTTACTACCGTCCACCTGA
CTGGGATGGAAAATCCTCTTTGAAAAAAATCACGGGGTCTAAAGGTGCGT
GTAACATGGAAGAAGGCTTCCTGGGGCACTCGATTACCGCTAACTCCTCC
CGCATGCAGGGCACAACCAATACACGCAAAGTGGAATTATCCGCTTCGAG
CTACCGTACAACAGCTGGTGCTTAAAATGTGATCGTCACATTGGTAAAGG
TGTGCGCTTTAACGCCAAGAAAATTCAGGTAAGGTGCGACAAGTCTTTAT
ATTTCCAGTCGCATGTACTTATTGTAAGCTGCTGGGCTCGCCCCCCCCCT
TCAATCCACACACAGGCGGGGAATTACTTCTCCACAAAAATATGGGAGTT
TCACATGAAATGTGCCTCATGCAAAAACCGCTTGGTGATCAGGACGGACC
CGAAAAATTGCGACTACGAGTTTGTGGAGGGCATTCGACGCCGCGAGCAA
GAATACGACCCGGAAGCCATCGGTTTGCCTGTCTTGTCAGCCGAACCCAC
GGGAGCGAGTGACTTGGCAGGAGCTGCCACTACTCCTTCCTCTGCCAACG
CCCCGAACGGGGGTGTCTCGGCCGACCCCCTGGCCGCCTTGGAGCGGGGT
AAGGACCAGATACGACGGACGAACGCCGCGGCGGCCCGCTTGCAGGAGCT
CATGGAGGCCTCGGACCGCCTCGAAGCCGATTCAAGTGGGGTCAACCGGC
TGCTACGCAACAAGTTTCGGGCGGAGAAAAAGGTTTTGGAAGACTTGGAC
CGGGAAAGTGCCGAAAAGGGCCTCCGCTTCCGACTCCTCCCCCCCAGCGC
GGAAGACGCTCGCATGGCCCCGATGGCCTTGCTGGAGGGAGGCACCGGGG
GTCTGACAAGGGCACGTCGAGAAGGTTTCCACAAAGCAGCCAGGACCAAG
CTCACCAGTATTATGAGTTCCTCCATTTTTGACGATCCAGGGGCAGGAAG
AAGATCATCCTCAGGCTCCTCGGCTTTGGTGGTGGGCAGCAAGAGAGGGG
ACCCGACGAAGCGGAGCAAAGCAGTCTTGAATGCGGAAACTCAAAAGGAC
CTGGCAGTGAAGCGGGCTAGATTAGGAATTGATTCTTCCCATTTCAAAGC
ATCCCAGGCAGCCAATGCCTCGACGTCAGCCCTTCTCATGGTGCCGTTCG
CGCCTACCCGGAGGAAAGAAAGGCGAAAGAGCTGA back to topCoding sequence (CDS) from alignment at CM002466.1:489719..490953- >rna5649 ID=rna5649|Name=rna5649|organism=Nannochloropsis gaditana|type=CDS|length=3249bp|location=Sequence derived from alignment at CM002466.1:489719..490953- (Nannochloropsis gaditana)
GCGGGGAATTACTTCTCCACAAAAATATGGGAGTTTCACATGAAATGTGC
CTCATGCAAAAACCGCTTGGTGATCAGGACGGACCCGAAAAATTGCGACT
ACGAGTTTGTGGAGGGCATTCGACGCCGCGAGCAAGAATACGACCCGGAA
GCCATCGGTTTGCCTGTCTTGTCAGCCGAACCCACGGGAGCGAGTGACTT
GGCAGGAGCTGCCACTACTCCTTCCTCTGCCAACGCCCCGAACGGGGGTG
TCTCGGCCGACCCCCTGGCCGCCTTGGAGCGGGGTAAGGACCAGATACGA
CGGACGAACGCCGCGGCGGCCCGCTTGCAGGAGCTCATGGAGGCCTCGGA
CCGCCTCGAAGCCGATTCAAGTGGGGTCAACCGGCTGCTACGCAACAAGT
TTCGGGCGGAGAAAAAGGTTTTGGAAGACTTGGACCGGGAAAGTGCCGAA
AAGGGCCTCCGCTTCCGACTCCTCCCCCCCAGCGCGGAAGACGCTCGCAT
GGCCCCGATGGCCTTGCTGGAGGGAGGCACCGGGGGTCTGACAAGGGCAC
GTCGAGAAGGTTTCCACAAAGCAGCCAGGACCAAGCTCACCAGTATTATG
AGTTCCTCCATTTTTGACGATCCAGGGGCAGGAAGAAGATCATCCTCAGG
CTCCTCGGCTTTGGTGGTGGGCAGCAAGAGAGGGGACCCGACGAAGCGGA
GCAAAGCAGTCTTGAATGCGGAAACTCAAAAGGACCTGGCAGTGAAGCGG
GCTAGATTAGGAATTGATTCTTCCCATTTCAAAGCATCCCAGGCAGCCAA
TGCCTCGACGTCAGCCCTTCTCATGGTGCCGTTCGCGCCTACCCGGAGGA
AAGAAAGGCGAAAGAGCTGAGGCACAACCAATACACGCAAAGTGGAATTA
TCCGCTTCGAGCTACCGTACAACAGCTGGTGCTTAAAATGTGATCGTCAC
ATTGGTAAAGGTGTGCGCTTTAACGCCAAGAAAATTCAGATGTCCTCTTT
GGCAGCCGCGCAAGCCGATGGTTACTACCGTCCACCTGACTGGGATGGAA
AATCCTCTTTGAAAAAAATCACGGGGTCTAAAGGCGGGGAATTACTTCTC
CACAAAAATATGGGAGTTTCACATGAAATGTGCCTCATGCAAAAACCGCT
TGGTGATCAGGACGGACCCGAAAAATTGCGACTACGAGTTTGTGGAGGGC
ATTCGACGCCGCGAGCAAGAATACGACCCGGAAGCCATCGGTTTGCCTGT
CTTGTCAGCCGAACCCACGGGAGCGAGTGACTTGGCAGGAGCTGCCACTA
CTCCTTCCTCTGCCAACGCCCCGAACGGGGGTGTCTCGGCCGACCCCCTG
GCCGCCTTGGAGCGGGGTAAGGACCAGATACGACGGACGAACGCCGCGGC
GGCCCGCTTGCAGGAGCTCATGGAGGCCTCGGACCGCCTCGAAGCCGATT
CAAGTGGGGTCAACCGGCTGCTACGCAACAAGTTTCGGGCGGAGAAAAAG
GTTTTGGAAGACTTGGACCGGGAAAGTGCCGAAAAGGGCCTCCGCTTCCG
ACTCCTCCCCCCCAGCGCGGAAGACGCTCGCATGGCCCCGATGGCCTTGC
TGGAGGGAGGCACCGGGGGTCTGACAAGGGCACGTCGAGAAGGTTTCCAC
AAAGCAGCCAGGACCAAGCTCACCAGTATTATGAGTTCCTCCATTTTTGA
CGATCCAGGGGCAGGAAGAAGATCATCCTCAGGCTCCTCGGCTTTGGTGG
TGGGCAGCAAGAGAGGGGACCCGACGAAGCGGAGCAAAGCAGTCTTGAAT
GCGGAAACTCAAAAGGACCTGGCAGTGAAGCGGGCTAGATTAGGAATTGA
TTCTTCCCATTTCAAAGCATCCCAGGCAGCCAATGCCTCGACGTCAGCCC
TTCTCATGGTGCCGTTCGCGCCTACCCGGAGGAAAGAAAGGCGAAAGAGC
TGAGGCACAACCAATACACGCAAAGTGGAATTATCCGCTTCGAGCTACCG
TACAACAGCTGGTGCTTAAAATGTGATCGTCACATTGGTAAAGGTGTGCG
CTTTAACGCCAAGAAAATTCAGATGTCCTCTTTGGCAGCCGCGCAAGCCG
ATGGTTACTACCGTCCACCTGACTGGGATGGAAAATCCTCTTTGAAAAAA
ATCACGGGGTCTAAAGGCGGGGAATTACTTCTCCACAAAAATATGGGAGT
TTCACATGAAATGTGCCTCATGCAAAAACCGCTTGGTGATCAGGACGGAC
CCGAAAAATTGCGACTACGAGTTTGTGGAGGGCATTCGACGCCGCGAGCA
AGAATACGACCCGGAAGCCATCGGTTTGCCTGTCTTGTCAGCCGAACCCA
CGGGAGCGAGTGACTTGGCAGGAGCTGCCACTACTCCTTCCTCTGCCAAC
GCCCCGAACGGGGGTGTCTCGGCCGACCCCCTGGCCGCCTTGGAGCGGGG
TAAGGACCAGATACGACGGACGAACGCCGCGGCGGCCCGCTTGCAGGAGC
TCATGGAGGCCTCGGACCGCCTCGAAGCCGATTCAAGTGGGGTCAACCGG
CTGCTACGCAACAAGTTTCGGGCGGAGAAAAAGGTTTTGGAAGACTTGGA
CCGGGAAAGTGCCGAAAAGGGCCTCCGCTTCCGACTCCTCCCCCCCAGCG
CGGAAGACGCTCGCATGGCCCCGATGGCCTTGCTGGAGGGAGGCACCGGG
GGTCTGACAAGGGCACGTCGAGAAGGTTTCCACAAAGCAGCCAGGACCAA
GCTCACCAGTATTATGAGTTCCTCCATTTTTGACGATCCAGGGGCAGGAA
GAAGATCATCCTCAGGCTCCTCGGCTTTGGTGGTGGGCAGCAAGAGAGGG
GACCCGACGAAGCGGAGCAAAGCAGTCTTGAATGCGGAAACTCAAAAGGA
CCTGGCAGTGAAGCGGGCTAGATTAGGAATTGATTCTTCCCATTTCAAAG
CATCCCAGGCAGCCAATGCCTCGACGTCAGCCCTTCTCATGGTGCCGTTC
GCGCCTACCCGGAGGAAAGAAAGGCGAAAGAGCTGAGGCACAACCAATAC
ACGCAAAGTGGAATTATCCGCTTCGAGCTACCGTACAACAGCTGGTGCTT
AAAATGTGATCGTCACATTGGTAAAGGTGTGCGCTTTAACGCCAAGAAAA
TTCAGATGTCCTCTTTGGCAGCCGCGCAAGCCGATGGTTACTACCGTCCA
CCTGACTGGGATGGAAAATCCTCTTTGAAAAAAATCACGGGGTCTAAAG back to top
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