EWM25035.1, cds5634 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25035.1 vs. NCBI_GenBank
Match: gi|585106671|gb|EWM25035.1| (coiled-coil domain-containing protein 130 [Nannochloropsis gaditana]) HSP 1 Score: 738.028 bits (1904), Expect = 0.000e+0 Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0 Query: 1 MSSLAAAQADGYYRPPDWDGKSSLKKITGSKGHNQYTQSGIIRFELPYNSWCLKCDRHIGKGVRFNAKKIQAGNYFSTKIWEFHMKCASCKNRLVIRTDPKNCDYEFVEGIRRREQEYDPEAIGLPVLSAEPTGASDLAGAATTPSSANAPNGGVSADPLAALERGKDQIRRTNAAAARLQELMEASDRLEADSSGVNRLLRNKFRAEKKVLEDLDRESAEKGLRFRLLPPSAEDARMAPMALLEGGTGGLTRARREGFHKAARTKLTSIMSSSIFDDPGAGRRSSSGSSALVVGSKRGDPTKRSKAVLNAETQKDLAVKRARLGIDSSHFKASQAANASTSALLMVPFAPTRRKERRKS 360 MSSLAAAQADGYYRPPDWDGKSSLKKITGSKGHNQYTQSGIIRFELPYNSWCLKCDRHIGKGVRFNAKKIQAGNYFSTKIWEFHMKCASCKNRLVIRTDPKNCDYEFVEGIRRREQEYDPEAIGLPVLSAEPTGASDLAGAATTPSSANAPNGGVSADPLAALERGKDQIRRTNAAAARLQELMEASDRLEADSSGVNRLLRNKFRAEKKVLEDLDRESAEKGLRFRLLPPSAEDARMAPMALLEGGTGGLTRARREGFHKAARTKLTSIMSSSIFDDPGAGRRSSSGSSALVVGSKRGDPTKRSKAVLNAETQKDLAVKRARLGIDSSHFKASQAANASTSALLMVPFAPTRRKERRKS Sbjct: 1 MSSLAAAQADGYYRPPDWDGKSSLKKITGSKGHNQYTQSGIIRFELPYNSWCLKCDRHIGKGVRFNAKKIQAGNYFSTKIWEFHMKCASCKNRLVIRTDPKNCDYEFVEGIRRREQEYDPEAIGLPVLSAEPTGASDLAGAATTPSSANAPNGGVSADPLAALERGKDQIRRTNAAAARLQELMEASDRLEADSSGVNRLLRNKFRAEKKVLEDLDRESAEKGLRFRLLPPSAEDARMAPMALLEGGTGGLTRARREGFHKAARTKLTSIMSSSIFDDPGAGRRSSSGSSALVVGSKRGDPTKRSKAVLNAETQKDLAVKRARLGIDSSHFKASQAANASTSALLMVPFAPTRRKERRKS 360
BLAST of EWM25035.1 vs. NCBI_GenBank
Match: gi|299472001|emb|CBN80084.1| (coiled-coil domain-containing protein 94 [Ectocarpus siliculosus]) HSP 1 Score: 206.453 bits (524), Expect = 4.909e-59 Identity = 127/307 (41.37%), Postives = 164/307 (53.42%), Query Frame = 0 Query: 1 MSSLAAAQADGYYRPPDWDGK-SSLKKITGSKGHNQYTQSGIIRFELPYNSWCLKCDRHIGKGVRFNAKKIQAGNYFSTKIWEFHMKCASCKNRLVIRTDPKNCDYEFVEGIRRREQEYDPEAIGLPVLSAEPTGASDLAGAATTPSSANAPNGGVSADPLAALERGKDQIRRTNAAAARLQELMEASDRLEADSSGVNRLLRNKFRAEKKVLEDLDRESAEKGLRFRLLPPSAEDARMAPMALLEGGTGGLTRARREGFHKAARTKLTSIMSSSIFDDPGAGRRSSSGS---SALVVGSKRGDPTK 303 MS+LAAA+AD Y PP+W + + K GS GHNQY + G IRFELP + WCL C RHIG+G RFNA K QAG Y+STKIW+F MKC SC N +VI+TDPKN YE+VEGIR+++ E+DPE A T + + ++ DPL LE + RR + L L E +D D N LR RA KK + + E+ KGL RL+ PS DA A R+R +GF + K+ +I SIF G+GR SS + + LV SK G T+ Sbjct: 1 MSTLAAARADNMYYPPEWRPEYGGISKFQGSNGHNQYEKYGKIRFELPDHGWCLGCGRHIGRGTRFNATKDQAGTYYSTKIWQFSMKCPSCSNVMVIKTDPKNTGYEYVEGIRKKDMEFDPEE------------------AETQRVQDSEVSKQLAVDPLYRLEHEQRDKRRAASRKTVLTRLTELADAHAQDDYSSNARLRQTMRARKKKEREREEEATAKGLGIRLVTPSPADADAARSVKY--------RSRHKGFRTGEKAKMAAITGESIF---GSGRESSEQARRKAVLVKASKLGLKTR 278
BLAST of EWM25035.1 vs. NCBI_GenBank
Match: gi|695042842|ref|XP_009409091.1| (PREDICTED: coiled-coil domain-containing protein 130-like [Musa acuminata subsp. malaccensis]) HSP 1 Score: 189.504 bits (480), Expect = 3.440e-54 Identity = 120/304 (39.47%), Postives = 162/304 (53.29%), Query Frame = 0 Query: 1 MSSLAAAQADGYYRPPDWD-GKSSLKKITGSKGHNQYTQSG-----IIRFELPYNSWCLKCDRHIGKGVRFNAKKIQAGNYFSTKIWEFHMKCASCKNRLVIRTDPKNCDYEFVEGIRRREQEYDPEAIGLPVLSAEPTGASDLAGAATTPSSANAPNGGVSADPLAALERGKDQIRRTNAAAARLQELMEASDRLEADSSGVNRLLRNKFRAEKKVLEDLDRESAEKGLRFRLLPPSAEDARMAPMALLEGGTGGLTRARREGFHKAARTKLTSIMSSSIFDDPGAGRRSSSGSSALVVGSKR 298 MSSLAAA+AD +Y PP+W+ K SL K G + + IIRFE+P+N WC C+ I KGVRFNA+K Q GNY+STKIW F MK A CK+ +VI+TDPKNC+Y + G +R+ ++YD E A T A+ G + ADP LE ++ +R+ L L SD AD +NR LR + R +K+ +E+ + S GL RLLPPS EDA + T + A + F + + K +IM+SSIF D A S+SGS + SKR Sbjct: 1 MSSLAAARADNFYYPPEWEPKKGSLNKFQGQHPLRERARKLDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGAQRKTEDYDIE------------------DAETFALPADEERGKL-ADPFYRLEHQEEDLRKKKEVEPLLVRLQRVSDSRHADDYSLNRALRARLRNQKRRVEEEEGVSRRMGLGIRLLPPSEEDAAV---------TAAVRFASK--FDRNRKNKRAAIMASSIFPDSSA---SASGSKRSELESKR 271
BLAST of EWM25035.1 vs. NCBI_GenBank
Match: gi|1040923829|ref|XP_017224133.1| (PREDICTED: coiled-coil domain-containing protein 130-like [Daucus carota subsp. sativus]) HSP 1 Score: 184.111 bits (466), Expect = 4.652e-52 Identity = 117/308 (37.99%), Postives = 159/308 (51.62%), Query Frame = 0 Query: 1 MSSLAAAQADGYYRPPDWD-GKSSLKKITGSKGHNQYTQSG-----IIRFELPYNSWCLKCDRHIGKGVRFNAKKIQAGNYFSTKIWEFHMKCASCKNRLVIRTDPKNCDYEFVEGIRRREQEY---DPEAIGLPVLSAEPTGASDLAGAATTPSSANAPNGGVSADPLAALERGKDQIRRTNAAAARLQELMEASDRLEADSSGVNRLLRNKFRAEKKVLEDLDRESAEKGLRFRLLPPSAEDARMAPMALLEGGTGGLTRARR-EGFHKAARTKLTSIMSSSIFDDPGAGRRSSSGSSALVVGSKR 298 MSSLAAA+AD +Y PP+W + SL K G + + IIRFE+PYN WC C+ I KGVRFNA+K Q GNY+STKIW F MK A C++ +VI+TDPKNC Y + G +++ ++Y D E + LPV E + S DP LE ++ +++ AA L L SD AD +N+ LR+K RA+KK + + + S + G+ RLLPPS ED T +R + FHK K I SSSIF + S+S + L + SKR Sbjct: 1 MSSLAAARADNFYYPPEWTPDQGSLNKFNGQHALRERARKLDQGILIIRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACCRHEIVIQTDPKNCQYVIISGAQQKIEDYDNEDAETLALPV-DEEKSKLS---------------------DPFYRLEHQEEDVKKKKAAEPVLVRLQRVSDARHADDYALNKALRSKLRAQKKRVAEEEAASRKMGIGIRLLPPSEED------------TATASRIKFPYKFHKNQVEKRALIRSSSIFSNT-----SASTTKQLELASKR 269
BLAST of EWM25035.1 vs. NCBI_GenBank
Match: gi|1111026503|ref|XP_019264338.1| (PREDICTED: coiled-coil domain-containing protein 130 [Nicotiana attenuata] >gi|1102290187|gb|OIT36504.1| hypothetical protein A4A49_02085 [Nicotiana attenuata]) HSP 1 Score: 182.956 bits (463), Expect = 1.399e-51 Identity = 114/312 (36.54%), Postives = 157/312 (50.32%), Query Frame = 0 Query: 1 MSSLAAAQADGYYRPPDWD-GKSSLKKITGSKGHNQYTQSG-----IIRFELPYNSWCLKCDRHIGKGVRFNAKKIQAGNYFSTKIWEFHMKCASCKNRLVIRTDPKNCDYEFVEGIRRREQEYDPEAIGLPVLSAEPTGASDLAGAATTPSSANAPNGGVSADPLAALERGKDQIRRTNAAAARLQELMEASDRLEADSSGVNRLLRNKFRAEKKVLEDLDRESAEKGLRFRLLPPSAEDARMAPMALLEGGTGGLTRARREGFHKAARTKLTSIMSSSI-FDDPGAGRRS----------SSGSSALVVG 295 MSSLAAA+AD +Y PP+W K SL K G + + IIRFE+PYN WC C+ I KGVRFNA+K Q GNY+STKIW F MK A CK+ +VI+TDPKNC+Y + G R++ ++YD E +L + + + DP LE ++ +++ A L L SD +D +N+ LR K R +KK + + + S + GL RLLPPSAEDA A F + R K I S SI F+ G+ +RS ++ +S L+VG Sbjct: 1 MSSLAAARADNFYYPPEWSPKKGSLNKFNGQHALRERARKIDQGILIIRFEMPYNIWCGGCESMIAKGVRFNAEKKQVGNYYSTKIWSFSMKSACCKHEIVIQTDPKNCEYVIISGARKKIEDYDAEDAETMILPVDEDKSKLV-------------------DPFYRLEHQEEDLKKKKEAEPLLVRLQRVSDTRHSDDYAMNKALRAKLRTQKKRVAEEEAASKKIGLGIRLLPPSAEDAATAASVKFA-----------HKFDRNRRDKRAIIYSGSIFFESSGSSKRSELESKRRKINAAAASKLLVG 282
BLAST of EWM25035.1 vs. NCBI_GenBank
Match: gi|1025133671|ref|XP_016465188.1| (PREDICTED: coiled-coil domain-containing protein 130-like [Nicotiana tabacum]) HSP 1 Score: 181.8 bits (460), Expect = 3.778e-51 Identity = 101/245 (41.22%), Postives = 134/245 (54.69%), Query Frame = 0 Query: 1 MSSLAAAQADGYYRPPDWD-GKSSLKKITGSKGHNQYTQSG-----IIRFELPYNSWCLKCDRHIGKGVRFNAKKIQAGNYFSTKIWEFHMKCASCKNRLVIRTDPKNCDYEFVEGIRRREQEYDPEAIGLPVLSAEPTGASDLAGAATTPSSANAPNGGVSADPLAALERGKDQIRRTNAAAARLQELMEASDRLEADSSGVNRLLRNKFRAEKKVLEDLDRESAEKGLRFRLLPPSAEDARMA 239 MSSLAAA+AD +Y PP+W K SL K G + + IIRFE+PYN WC C+ I KGVRFNA+K Q GNY+STKIW F MK A CK+ +VI+TDPKNC+Y + G R++ ++YD E VL + + + DP LE ++ +++ A L L SD +D +NR LR K R +KK + + + S + GL RLLPPSAEDA A Sbjct: 1 MSSLAAARADNFYYPPEWSPKKGSLNKFNGQHALRERARKIDQGILIIRFEMPYNIWCGGCESMIAKGVRFNAEKKQVGNYYSTKIWSFSMKSACCKHEIVIQTDPKNCEYVIISGARKKIEDYDAEDAETLVLPVDEDKSKLV-------------------DPFYRLEHQEEDLKKKKEAEPLLVRLQRVSDSRHSDDYAMNRALRAKLRTQKKRVAEEEAASKKIGLGIRLLPPSAEDAATA 226
BLAST of EWM25035.1 vs. NCBI_GenBank
Match: gi|1201305387|gb|OVA06757.1| (CWC16 protein [Macleaya cordata]) HSP 1 Score: 181.8 bits (460), Expect = 4.615e-51 Identity = 114/300 (38.00%), Postives = 154/300 (51.33%), Query Frame = 0 Query: 1 MSSLAAAQADGYYRPPDWD-GKSSLKKITGSKGHNQYTQSG-----IIRFELPYNSWCLKCDRHIGKGVRFNAKKIQAGNYFSTKIWEFHMKCASCKNRLVIRTDPKNCDYEFVEGIRRREQEYDPEAIGLPVLSAEPTGASDLAGAATTPSSANAPNGGVSADPLAALERGKDQIRRTNAAAARLQELMEASDRLEADSSGVNRLLRNKFRAEKKVLEDLDRESAEKGLRFRLLPPSAEDARMAPMALLEGGTGGLTRARREGFHKAARTKLTSIMSSSIFDDPGAGRRSSSGSSALVV 294 MSSLAAA+AD +Y PP+WD + SL K G + + IIRFE+P+N WC C+ IGKGVRFNA+K Q GNY+STKIW F MK A CK+ +VI TDPKNC+Y + G +R+ ++YD E A T A+ G + ADP LE ++ +++ A L L SD +D +N+ LR + R +KK + + + S + GL RLLP S ED +A F K R K I ++SIF D SSGSS++ V Sbjct: 1 MSSLAAARADNFYYPPEWDPSQGSLNKFHGQHALRERARKLDQGILIIRFEMPFNIWCGGCNSMIGKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIVIHTDPKNCEYVIISGAQRKTEDYDVE------------------DAETFELPADEERGKL-ADPFYRLEHQEEDLQKKKEAEPVLVRLQRVSDSRHSDDYSLNKALRARLRDQKKRVAEEEVASTKIGLGIRLLPRSEEDISVAKCVKFSS-----------KFEKNKRDKRALIKAASIFPD-------SSGSSSVPV 263
BLAST of EWM25035.1 vs. NCBI_GenBank
Match: gi|1147588298|ref|XP_020097966.1| (coiled-coil domain-containing protein 130 [Ananas comosus]) HSP 1 Score: 181.8 bits (460), Expect = 5.022e-51 Identity = 113/304 (37.17%), Postives = 160/304 (52.63%), Query Frame = 0 Query: 1 MSSLAAAQADGYYRPPDWD-GKSSLKKITGSKGHNQYTQSG-----IIRFELPYNSWCLKCDRHIGKGVRFNAKKIQAGNYFSTKIWEFHMKCASCKNRLVIRTDPKNCDYEFVEGIRRREQEYDPEAIGLPVLSAEPTGASDLAGAATTPSSANAPNGGVSADPLAALERGKDQIRRTNAAAARLQELMEASDRLEADSSGVNRLLRNKFRAEKKVLEDLDRESAEKGLRFRLLPPSAEDARMAPMALLEGGTGGLTRARREGFHKAARTKLTSIMSSSIFDDPGAGRRSSSGSSALVVGSKR 298 MSSLAAA+AD +Y PP+W K SL K G + + IIRFE+P+N WC C+ I KGVRFNA+K Q GNY+STKIW F MK A CK+ ++I+TDPKNC+Y + G +R+ +++D E A T A+ G + ADP LE ++ +++ A L L SD ++ +NR LR++ R++KK + + + + GL RLLPPS+EDA A F K R K +I ++SIF +P + S+SGS L + KR Sbjct: 1 MSSLAAARADNFYYPPEWSPKKGSLNKFHGQHALRERARKIDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSACCKHEIIIQTDPKNCEYVIISGAQRKTEDFDIE------------------DAETFALPADEERGKL-ADPFYRLEHQEEDLQKKKEAEPVLVRLQRVSDSRHSNDYSLNRALRDRLRSQKKRVAEETEVARKMGLGVRLLPPSSEDAAAAAAVRFSS-----------KFEKNRRDKRAAIKAASIFVEPSS---SASGSKRLELELKR 271
BLAST of EWM25035.1 vs. NCBI_GenBank
Match: gi|698527308|ref|XP_009760494.1| (PREDICTED: coiled-coil domain-containing protein 130-like [Nicotiana sylvestris]) HSP 1 Score: 180.259 bits (456), Expect = 1.197e-50 Identity = 100/245 (40.82%), Postives = 134/245 (54.69%), Query Frame = 0 Query: 1 MSSLAAAQADGYYRPPDWD-GKSSLKKITGSKGHNQYTQSG-----IIRFELPYNSWCLKCDRHIGKGVRFNAKKIQAGNYFSTKIWEFHMKCASCKNRLVIRTDPKNCDYEFVEGIRRREQEYDPEAIGLPVLSAEPTGASDLAGAATTPSSANAPNGGVSADPLAALERGKDQIRRTNAAAARLQELMEASDRLEADSSGVNRLLRNKFRAEKKVLEDLDRESAEKGLRFRLLPPSAEDARMA 239 MSSLAAA+AD +Y PP+W K SL K G + + IIRFE+PYN WC C+ I KGVRFNA+K Q GNY+STKIW F MK A C++ +VI+TDPKNC+Y + G R++ ++YD E VL + + + DP LE ++ +++ A L L SD +D +NR LR K R +KK + + + S + GL RLLPPSAEDA A Sbjct: 1 MSSLAAARADNFYYPPEWSPKKGSLNKFNGQHALRERARKIDQGILIIRFEMPYNIWCGGCESMIAKGVRFNAEKKQVGNYYSTKIWSFSMKSACCQHEIVIQTDPKNCEYVIISGARKKIEDYDAEDAETLVLPVDEDKSKLV-------------------DPFYRLEHQEEDLKKKKEAEPLLVRLQRVSDSRHSDDYAMNRALRAKLRTQKKRVAEEEAASKKIGLGIRLLPPSAEDAATA 226
BLAST of EWM25035.1 vs. NCBI_GenBank
Match: gi|901816063|gb|KMZ70372.1| (putative Coiled-coil domain-containing protein [Zostera marina]) HSP 1 Score: 180.644 bits (457), Expect = 1.233e-50 Identity = 107/281 (38.08%), Postives = 150/281 (53.38%), Query Frame = 0 Query: 1 MSSLAAAQADGYYRPPDWD-GKSSLKKITGSKGHNQYTQSG-----IIRFELPYNSWCLKCDRHIGKGVRFNAKKIQAGNYFSTKIWEFHMKCASCKNRLVIRTDPKNCDYEFVEGIRRREQEYDPEAIGLPVLSAEPTGASDLAGAATTPSSANAPNGGVSADPLAALERGKDQIRRTNAAAARLQELMEASDRLEADSSGVNRLLRNKFRAEKKVLEDLDRESAEKGLRFRLLPPSAEDARMAPMALLEGGTGGLTRARREGFHKAARTKLTSIMSSSI 275 MSSLAAA+AD +Y PP+W K L K G + + IIRFE+P+N WC C+ I KGVRFNA+K Q GNY+STKIW F MK A CKN +VI+TDPKNC+Y + G +R+ ++YD E A T A+ G +S DP LE + +++ A L L + SDR +D +NR LR + R +K+ + + ++ S +KGL R+LP S +D + A + ++ R K A K +SI SSS+ Sbjct: 1 MSSLAAARADNFYYPPEWSPKKGGLNKFNGQHALRERARKLDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFSMKAACCKNLIVIQTDPKNCEYLIISGAQRKTEDYDAE------------------DAETLALPADEEKGKLS-DPFYRLEHQEVDLQKKKEAEPLLVRLQKVSDRRHSDDYSLNRSLRARLRGQKRKIAEEEQISRKKGLGIRMLPESIDDIQRAALVNFS------SKCDRNSKDKRAAIKASSIFSSSL 256 The following BLAST results are available for this feature:
BLAST of EWM25035.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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