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Properties
| Property Name | Value |
|---|
| Product | acyl dehydratase |
| Orig transcript id | gnl|cribi|Naga_100049g34.2090.mrna |
| Orig protein id | gnl|cribi|Naga_100049g34.2090 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:454416..457130 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5634 ID=rna5634|Name=rna5634|organism=Nannochloropsis gaditana|type=mRNA|length=2393bp
GTAGATGATGAAGTTCCGTATCGGGCGGTCACTGGTTCAAATCCGGTGGG
TCGGAAGCCAACTTTTTTGGGTCTAAGACCCTGACTGGCGGCGCTATGCG
TGAGGGATGCTGAGGTTCAGGACCTTGCACGGCGGTTTGGGGGAGGGATT
GTAGTGTGCCCGTTCTACATTTTTAATCTTCACAACGTAATTTATGATGT
CCTGTGCGCAAGCTTCCCGTGCGCCTCGCTCGTTCGTCATCCCTCTCAAC
ACTCCGGAAAGAAAGATACCTTTCTCCCCCAGTACGAAGGCTGGACCCGT
TCTAGCGCTCACAGCCAAAGCGGGAGAGGACGAATGTATGTATACCGGGT
AAGGCCTGCACGTGTATTCCTTCTACGCGTCATGTAAATTAAAGAACTTA
GATAATCATTGGATTCATCGCCGAGGATCGCTGCCAGAAAAAAGTCCCGG
GGCAAAATCTGCCGCATTTTTATAGGTACTTTGCAGCGCTTTTTTGACTT
CGAGAAAGAACTGAAAATGACGGATCCCAGCGCCTCAACTACCGCCGCAG
CGCAACTTCCTGGTCGCATGTTGGCAGGAGTTGCAGATCATCATGGTGAC
CGCTTTGACATGCGTGAAATTCCTGTCACGCCGCCAGGAGTAGGCCAGGC
GCTGGTCAAGGTGGTGACAAGCGGTGTATGCCATACGGATGTGCATGCTG
TTGACGGAGACTGGCCGGCCCCTACTAAGCTTCCCTTGGTTCCTGGTCAT
GAAGGGGCGGGTGTGGTGGTAGCCGTGGGGCCCGGCGTCAGCAGCACCGT
CGTCAGCCTCGGGGACCGCGTTGGTATCCCCTGGCTCCACTCAAGCTGTG
GCTCCTGCGAGTTTTGCCTGTCTGGTCGTGAGAACCTCTGCCCCTTGCAG
GATAACACGGGGTATTCCGTGGATGGCTGCTTCGCCCAGTACGTTCTGGC
ACCAGCTGCGCATTTGGCGAAGATCCCGGACGAAGTCAGCTTTGAGCAGG
CTGCCCCTATCCTTTGCGCGGGCGTCACGACCTACTCGGCAATCAAAGCA
ACAGAGGCTCGGCCTGGTCAGTTCCTCACCGTGATTGGTGCTGCAGGCGG
TCTAGGCCATCTGGCTGTGCAGTTCGGTGTAGCCCTGGGACTGCGCGTCA
TGGCGCTAGACCGGGGCGCCGATAAGTTGAAGTTTTGCACAGACACACTG
GGAGCCGAAGCCGCGTTTGAGGCGATGGACCCGGGAGTGGTGGACCAGGT
CATTGCAACCACGAAGGGTGGGTCCCACGGTGTGTTGTGCCTCGCTCCCT
CCATCGGAGCCTTTAAATCGGCGGTGAGTCTCTGCCGCCGCGGAGGAACC
ATTGTAATGGTTGGGCTGCCAAAGGGGGACCTGCCCCTTAATATTTTCGA
TATTGTCATTCGTGGTATCACCGTGCGAGGGAGCATTGTTGGAACGCGAA
AGGACTTAGACGAGGCGTTGGACTTTGCGGCCCGGGGCAAAGTGAAGTGT
CATACGGAGATGCATGGATTCGGCGAATTAAATCAAGTCTTTGACCAACT
CCGCTCTGGAAAGGTCATGGGTAGGCTTGTGTTGAGCGTGGATGGCATGT
GAAGAATTCGTTTCGTGCAGGATATCAACAACGATATGAGTTAAAATTTT
AGAAAAACGGGTCGACTTTAGCTGATACACGGGTGCAGGCTTGGTGAAGG
AGAAGACATGGAAGGATCACGAGAGAGAGAGACGAAGTGTTTGTCTCAGG
ATTTCTTGGATATCAAGGTCACGTAAAGCTTCAATAAGTGGATGGCTGCC
TCATATGAGGTCGTCAGAGTTCGGATTGATTAGGCTTTTACGAGAGTAAC
TAGTTGGTCAAGTTCTTCCATGCGTAGGGATGGTGTAGGACAGTAAATAA
TATGTGTGATCCCGTTTTCCGCGGGTTGAAGGTGGAATCAGAAGCCACGT
TCGGAGTATTCGGAAGTCATTCCAAGAATTTTTGCTTCTACACTTGCATC
TTGGGAAAAAAACGAAAAAATGGAATGGAAGATTTGTAAGATGCTGTCCA
GGTGTAGACTTCTAGATGCGAGCAACCCCCCCGTAAGAAATAAATATTTT
TCTGCTAATATTCATACATACACCCATTAAAAGCTCACCTCAGTCCAGCC
GTATCCATTGCGATGGCAGTCTTCCGGCCCAAGGATTTCAAGCCGCTCAA
TTGCGTCGACTAAATCTTAAGTCTGACTTCGGGAGCAATCCTTGCTGCTC
TCTTAGTTTCTGGGATTTCAACCATTTCCTGATCGCCAGAGAAGAAAAAT
AATCCCGTCGCGGTGCACTTTCATCGATCGGCCAAGAGATGATCTATGGG
GAAATCTTCCCCAACCCTGCTATGTTTCCCAGGACGAGCAAAG back to topprotein sequence of rna5634 >rna5634-protein ID=rna5634-protein|Name=rna5634|organism=Nannochloropsis gaditana|type=polypeptide|length=378bp
MAPSPLGAMLARVQAALPGNFVPVLATVVVGLLTLVLIAHVVEDHMSKGG
TDTFYPSVANTRVLSYKLLTGALSKGSKWKKDVQKENFHLCDRVLSAQLS
LLPHTEHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEY
PFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFIST
LRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTW
SLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAEC
QAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTPIVATEGSKGGS
GAAPRALRYEVLNKAGKIAVEGEFFYRG back to topmRNA from alignment at CM002466.1:454416..457130+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5634 ID=rna5634|Name=rna5634|organism=Nannochloropsis gaditana|type=mRNA|length=2715bp|location=Sequence derived from alignment at CM002466.1:454416..457130+ (Nannochloropsis gaditana)
GACGCGTAGAAGGAATACACGTGCAGGCCTTACCCGGTATACATACAttc
gtcctctcccgctttGGCTGTGAGCGCTAGAACGGGTCCAGCCTTCGTAC
TGGGGGAGAAAGGTATCTTTCTTTCCGGAGTGTTGAGAGGGATGACGAAC
GAGCGAGGCGCACGGGAAGCTTGCGCACAGGACATCATAAATTACGTTGT
GAAGATTAAAAATGTAGAACGGGCACACTACAATCCCTCCCCCAAACCGC
CGTGCAAGGTCCTGAACCTCAGCATCCCTCACGCATAGCGCCGCCAGTCA
GGGTCTTAGACCCAAAAAAGTTGGCTTCCGACCCACCGGATTTGAACCAG
TGACCGCCCGATACGGAACTTCATCATCTACAGTCAGGCGCTCTACCAAC
TGAGCTAGGGTCGGTATTTCGACAGTTTGAGTCGTTCTGCCTTACTACAA
AGGGTGTTCTAAGTTCCCACCCTAGGTTCCTCCTCACTCGTGCGATATGT
TGGGGACTAGCGGAAGGAAATTGATGGATGTGGCTGCTTTTTCGGCCTAC
TTCGGTGCAGTGAGAGATGGTTAAATATCGGATGGGGCTTTTTAGCAAAC
ATCACGGCGAAGGAAGGCTCTTAAATTTTCTTCGACTAGGCGTCTCAGGA
TGTCAAAATGTTCTTCGACCGGATTTCTGCGTGCAAGAAGTCAGAAGTCC
TTCGATGATATGGAAGAATGGCTGCTTGCTATGTATGTATGGACAAAAAT
TGACTCTGGCATAACCTTCCTTCGCTCGTAATTGGCATTCTCGAGCGGGG
TCTGGAGTGTTGCCATTGCGGCATACGGAGCACAGCATGGAACCCTCTGG
CAATGTATCGCAGTGCTGGGCATTCATTTGGCTCAAGACACGCTAGACAC
GACATATTTGATCATTTTATTATTTGACACACTGATGCCATGGCACAATT
TCCGCACAGCATCCCATggcgccttccccgctcGGCGCTATGCTTGCCCG
CGTCCAAGCAGCCCTCCCTGGAAACTttgtccccgtcctcgccacCGTCG
TTGTGGGTCTTCTCACGCTTGTGTTGATTGCGCATGTCGTAGAAGACCAC
ATGAGCAAAGGCGGTACCGACACCTTTTACCCCTCTGTGGCAAACACTCG
GGTACTCAGCTATAAACTCTTAACCGGAGCTCTGAGTAAAGGAAGCAAAT
GGAAAAAGGACGTCCAAAAAGAAAACTTTCACCTCTGCGACCGTGTGCTT
TCGGCTCAgctctctcttcttccccacacCGAGCATGTGGCCGACATAAT
TCGCGTCTGTGagctcccctcctcggcaccttccccccgcgtccacctcc
ctttcgtTTACCCAGCGGTCCTCATGGTCTACCCCAACTGCCTGCTCTTC
ACCAAGCCCGAAtaccccttccctgccatcGGCTCTGTGCACGTTTTTAA
CCGTACTGTCATCCACCGGCCTCTTtctgtggaggaggagtacgcCGCTC
TCCTCAAAGTCGATCCCGTCGTCAAGCCTGCGAAAAAGGGCACTGAGGTC
ACGTTTATCTCCACCTTGCGGGACAAGACAGGTGCAGTGGTCTGGAGCAA
CGCGAGCACCTTCCTCGTGCTGCACAAACGCTTACAGACCATGACACCTA
CGTAAGCGAACAGAaaggatggatggagggggcaCACCTTTCTTTACATT
ATTTTCAGCATCTATCTTCGGGTTTCGAGTATTTCTCTTTCACGAGATTG
ACATTATTTTGTTGTAGTCTCTGAAGTCGGTGCTGATAGTTCCGATTGGG
GACCTCTTTGTCGTTTCTGACCTGTCCGTACGCCAAACGTGTCGCGCGTT
GACCCATGCTATCTTTTcgacgccttcttcccttctcccaaCAGTGTCAA
GCCCGACCGCGAAGTTCAGCCTCCCACGACTACCGCCCCTGTAATGAATA
CTACCTGGTCCCTTCCTGCCAATATGGGCCGCCAGTACGCGGCCGTGGCG
AAGGATAACAACCCGATACACACATCCGCCCTGGCTGCAAAGGCTTTCGG
GTTCCCTGGCGTCATCATGCACGGCATGTATTTCATTGTCCGGGCAGCCG
CTGAGTGCCAGGCTGTTGTCGAGAAATCGGATGGGCTCGGAAAGCTTGGG
TATCCTGTGGAAGTTACGGCGAAATTCGTAAGGCCGGTAGTGTTGCCCCA
CAAAGTTGGATTTAAGGTGACACCGATTGTAGCCAcggaggggagcaagg
gaggatcTGGTGCAGCGCCGCGTGCTTTACGATATGAAGTGCTAAATAAG
GCAGGCAAAATTGCTGTGGAGGGTGAGTTTTTCTACCGAGGGTAGGAGCA
CTTTTCtcgtgaaggaaggggggggaaaacgaGTTTTGCAACGGCTGCGC
GGGATGGAGTGAGAACAAGGACGAGAATAGACCAGTACCAATGTATCTGT
TAGAACAGCGTGATAATAAAGTAGTTTGAGTCTCTCTTATGGTGTTGTGT
GGTCTGATTGAAATTAAAAGAGTGGCTTTGTAAGGATTACCTTGCCCGGG
CGTAGCACTTTGAACATGAGAAACATTGGATATTTTTTAAATACACTCCT
GAAATATTTACCAGCACGCTTGAGGTAAATTGCCATATTCTACTCGCATA
TTCCTCTATTATCATTTCTAGACAGGAGACACTTTGTTTTCATGTAGAGA
TGTAGAGTGTCGAGC back to topCoding sequence (CDS) from alignment at CM002466.1:454416..457130+ >rna5634 ID=rna5634|Name=rna5634|organism=Nannochloropsis gaditana|type=CDS|length=2274bp|location=Sequence derived from alignment at CM002466.1:454416..457130+ (Nannochloropsis gaditana)
ATggcgccttccccgctcGGCGCTATGCTTGCCCGCGTCCAAGCAGCCCT
CCCTGGAAACTttgtccccgtcctcgccacCGTCGTTGTGGGTCTTCTCA
CGCTTGTGTTGATTGCGCATGTCGTAGAAGACCACATGAGCAAAGGCGGT
ACCGACACCTTTTACCCCTCTGTGGCAAACACTCGGGTACTCAGCTATAA
ACTCTTAACCGGAGCTCTGAGTAAAGGAAGCAAATGGAAAAAGGACGTCC
AAAAAGAAAACTTTCACCTCTGCGACCGTGTGCTTTCGGCTCAgctctct
cttcttccccacacCGAGCATGTGGCCGACATAATTCGCGTCTGTGagct
cccctcctcggcaccttccccccgcgtccacctccctttcgtTTACCCAG
CGGTCCTCATGGTCTACCCCAACTGCCTGCTCTTCACCAAGCCCGAAtac
cccttccctgccatcGGCTCTGTGCACGTTTTTAACCGTACTGTCATCCA
CCGGCCTCTTtctgtggaggaggagtacgcCGCTCTCCTCAAAGTCGATC
CCGTCGTCAAGCCTGCGAAAAAGGGCACTGAGGTCACGTTTATCTCCACC
TTGCGGGACAAGACAGGTGCAGTGGTCTGGAGCAACGCGAGCACCTTCCT
CGTGCTGCACAAACGCTTACAGACCATGACACCTACTGTCAAGCCCGACC
GCGAAGTTCAGCCTCCCACGACTACCGCCCCTGTAATGAATACTACCTGG
TCCCTTCCTGCCAATATGGGCCGCCAGTACGCGGCCGTGGCGAAGGATAA
CAACCCGATACACACATCCGCCCTGGCTGCAAAGGCTTTCGGGTTCCCTG
GCGTCATCATGCACGGCATGTATTTCATTGTCCGGGCAGCCGCTGAGTGC
CAGGCTGTTGTCGAGAAATCGGATGGGCTCGGAAAGCTTGGGTATCCTGT
GGAAGTTACGGCGAAATTCGTAAGGCCGGTAGTGTTGCCCCACAAAGTTG
GATTTAAGGTGACACCGATTGTAGCCAcggaggggagcaagggaggatcT
GGTGCAGCGCCGCGTGCTTTACGATATGAAGTGCTAAATAAGGCAGGCAA
AATTGCTGTGGAGGGTGAGTTTTTCTACCGAGGGTAGATggcgccttccc
cgctcGGCGCTATGCTTGCCCGCGTCCAAGCAGCCCTCCCTGGAAACTtt
gtccccgtcctcgccacCGTCGTTGTGGGTCTTCTCACGCTTGTGTTGAT
TGCGCATGTCGTAGAAGACCACATGAGCAAAGGCGGTACCGACACCTTTT
ACCCCTCTGTGGCAAACACTCGGGTACTCAGCTATAAACTCTTAACCGGA
GCTCTGAGTAAAGGAAGCAAATGGAAAAAGGACGTCCAAAAAGAAAACTT
TCACCTCTGCGACCGTGTGCTTTCGGCTCAgctctctcttcttccccaca
cCGAGCATGTGGCCGACATAATTCGCGTCTGTGagctcccctcctcggca
ccttccccccgcgtccacctccctttcgtTTACCCAGCGGTCCTCATGGT
CTACCCCAACTGCCTGCTCTTCACCAAGCCCGAAtaccccttccctgcca
tcGGCTCTGTGCACGTTTTTAACCGTACTGTCATCCACCGGCCTCTTtct
gtggaggaggagtacgcCGCTCTCCTCAAAGTCGATCCCGTCGTCAAGCC
TGCGAAAAAGGGCACTGAGGTCACGTTTATCTCCACCTTGCGGGACAAGA
CAGGTGCAGTGGTCTGGAGCAACGCGAGCACCTTCCTCGTGCTGCACAAA
CGCTTACAGACCATGACACCTACTGTCAAGCCCGACCGCGAAGTTCAGCC
TCCCACGACTACCGCCCCTGTAATGAATACTACCTGGTCCCTTCCTGCCA
ATATGGGCCGCCAGTACGCGGCCGTGGCGAAGGATAACAACCCGATACAC
ACATCCGCCCTGGCTGCAAAGGCTTTCGGGTTCCCTGGCGTCATCATGCA
CGGCATGTATTTCATTGTCCGGGCAGCCGCTGAGTGCCAGGCTGTTGTCG
AGAAATCGGATGGGCTCGGAAAGCTTGGGTATCCTGTGGAAGTTACGGCG
AAATTCGTAAGGCCGGTAGTGTTGCCCCACAAAGTTGGATTTAAGGTGAC
ACCGATTGTAGCCAcggaggggagcaagggaggatcTGGTGCAGCGCCGC
GTGCTTTACGATATGAAGTGCTAAATAAGGCAGGCAAAATTGCTGTGGAG
GGTGAGTTTTTCTACCGAGGGTAG back to top
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