EWM25031.1, cds5620 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|585106667|gb|EWM25031.1| (acyl dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 771.541 bits (1991), Expect = 0.000e+0 Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 0
Query: 1 MAPSPLGAMLARVQAALPGNFVPVLATVVVGLLTLVLIAHVVEDHMSKGGTDTFYPSVANTRVLSYKLLTGALSKGSKWKKDVQKENFHLCDRVLSAQLSLLPHTEHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTPIVATEGSKGGSGAAPRALRYEVLNKAGKIAVEGEFFYRG 378
MAPSPLGAMLARVQAALPGNFVPVLATVVVGLLTLVLIAHVVEDHMSKGGTDTFYPSVANTRVLSYKLLTGALSKGSKWKKDVQKENFHLCDRVLSAQLSLLPHTEHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTPIVATEGSKGGSGAAPRALRYEVLNKAGKIAVEGEFFYRG
Sbjct: 1 MAPSPLGAMLARVQAALPGNFVPVLATVVVGLLTLVLIAHVVEDHMSKGGTDTFYPSVANTRVLSYKLLTGALSKGSKWKKDVQKENFHLCDRVLSAQLSLLPHTEHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTPIVATEGSKGGSGAAPRALRYEVLNKAGKIAVEGEFFYRG 378
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|1099501505|emb|SFS85726.1| (MaoC like domain-containing protein [Saccharopolyspora flava]) HSP 1 Score: 135.191 bits (339), Expect = 1.864e-33 Identity = 91/245 (37.14%), Postives = 124/245 (50.61%), Query Frame = 0
Query: 102 LPHTEHV-----------ADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGF 335
LP TE+V A+ RVC R LP YP +L + L T +PFP +G VHV NR RP+ V +E ++KV + +P KG + + T G VVW ST+L + KR ++ KP RE++P + + TW +PA +GR+YAAV+ D NPIH AL AKAFGFP I HGM+ + A C A +E G+L V F +P++LP K F
Sbjct: 29 LPETEYVRRGITVDPVELAEYNRVCGF-----RLRDELPVTYPHILSFPASVQLMTDKGFPFPLVGLVHVANRIQQDRPVLVTDELTQVVKVADL-RPHPKGKQFDVV-TETSVDGEVVWRETSTYLRVGKRDESAP--QKPRREIEPGSPSG-----TWRVPAGLGREYAAVSGDRNPIHLHALTAKAFGFPKAIAHGMW----SKARCLAALE-----GRLPEAFTVDVDFAKPLLLPSKADF 250
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|1142763760|ref|WP_077010724.1| (hypothetical protein [Saccharothrix sp. ALI-22-I] >gi|1140165342|gb|ONI82731.1| hypothetical protein ALI22I_39685 [Saccharothrix sp. ALI-22-I]) HSP 1 Score: 132.88 bits (333), Expect = 1.054e-32 Identity = 96/255 (37.65%), Postives = 128/255 (50.20%), Query Frame = 0
Query: 85 KENFHLCDRVLSAQLSLLPHTEHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTP 339
+ L + L A++++ P EH+A +VC R LP YP VL L T E+PFP G VHV NR HRPL V E + L V ++P +G + ++T+ + G W + ST+L R P KP RE +PP TA TW LP ++GR+YA V+ D NPIH AL AKAFGFP I HGM+ + A C A E G+L EV +F P+ LP +V F +P
Sbjct: 18 RRGTELPESSLDAEITVDP--EHLARYNKVCGF-----GVRDELPITYPHVLGFGLQIRLMTGREFPFPLPGLVHVANRITQHRPLLVPEPLS-LHVVLANLRPHARGQQFDVVTTVCVE-GEEAWVDVSTYL----RRGRGVPERKPPRE-EPPVPTA-----TWRLPGDLGRRYADVSGDRNPIHLHALTAKAFGFPRAIAHGMW----SKARCLAAFE-----GRLPDAYEVDVRFKAPIPLPGEVDFSTSP 244
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|739211344|ref|WP_037074732.1| (hypothetical protein [Pseudonocardia spinosispora]) HSP 1 Score: 130.568 bits (327), Expect = 1.114e-31 Identity = 84/236 (35.59%), Postives = 115/236 (48.73%), Query Frame = 0
Query: 108 VADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTPIVAT 343
+AD RVC P LP +P VL P L T+P +P G VH+ R +HRP+ +E ++ + +P KGT+V +S++ +G VWS ST+L TPT + E +P + W L + GR+YAAV+ D NPIH LAAKAFGFPG I HGM+ AA C A ++ G+L ++ F +PVVLP V V T
Sbjct: 48 LADYARVCGFPLDG-----RLPTTFPQVLSFGPQVQLMTEPGFPLRLPGLVHLRQRITVHRPIGADERLDLRVRAADL-RPHAKGTQVDLLSSV-TVSGEEVWSAVSTYL------SRGTPTGTAEAEREPAEVPDAPLAARWHLAGDTGRRYAAVSGDVNPIHLHPLAAKAFGFPGAIAHGMW----TAARCLATLQ-----GRLPEAYDLDVVFRKPVVLPSDVQLHVAHATGT 261
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|491609461|ref|WP_005467019.1| (hypothetical protein [Saccharomonospora glauca] >gi|384523935|gb|EIF01131.1| acyl dehydratase [Saccharomonospora glauca K62]) HSP 1 Score: 130.568 bits (327), Expect = 1.239e-31 Identity = 85/232 (36.64%), Postives = 119/232 (51.29%), Query Frame = 0
Query: 107 HVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLR---DKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGF 335
H+A RVC + LP YP VL L T+P++PFP +G VH+ NR HRP+ ++E++ ++ + ++P KGT+ IS L D TG VW++ ST+L H+ + + K E+ PP +A W +P N+GR+YA V+ D NPIH L A+AFGF I HGM+ A C A E G+L V +F PV LP KV F
Sbjct: 48 HLAAYNRVCGFRLTD-----DLPATYPHVLAFPLQMALMTQPDFPFPLLGMVHIANRITQHRPVRLDEKFTLRVRAE-NLRPHDKGTQFDVISELAPELDATGTPVWTDVSTYL--HRGPGSGGSSAK-KTELAPPAPSA-----VWPVPGNIGRRYAEVSGDRNPIHLHKLTARAFGFRSAIAHGMW----TKARCLAAFE-----GRLPDAYTVDVRFQLPVFLPAKVAF 256
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|522152603|ref|WP_020663811.1| (hypothetical protein [Amycolatopsis benzoatilytica]) HSP 1 Score: 129.798 bits (325), Expect = 1.820e-31 Identity = 82/230 (35.65%), Postives = 118/230 (51.30%), Query Frame = 0
Query: 106 EHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGF 335
EHVA VC S LP YP +L+ L T+P++PFP +G VHV NR HRPL + E + ++ + ++P +KG + +S R T VVW+ ST+L H+ P + ++ PPT TA W++P ++GR+YA V+ D NPIH L A+ FGFP I HGM+ A A + G+L VT +F +PV+LP + F
Sbjct: 44 EHVAAYNEVCGFRFSD-----ELPVTYPHMLVFGLQMALMTEPDFPFPLLGLVHVENRITQHRPLRLGETFRVSVRAE-NLRPHEKGRQFDMVSEARAGT-EVVWTEVSTYL--HRSGSGSAPAAR--TQLTPPTPTA-----LWAIPGDIGRRYAEVSGDRNPIHLHPLTARMFGFPKAIAHGMWTKAHALASLE---------GRLPDAYTVTVRFKQPVLLPARAAF 248
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|926386028|ref|WP_053714420.1| (dehydratase [Saccharothrix sp. NRRL B-16348] >gi|925611811|gb|KOX35113.1| dehydratase [Saccharothrix sp. NRRL B-16348]) HSP 1 Score: 129.413 bits (324), Expect = 2.031e-31 Identity = 86/234 (36.75%), Postives = 117/234 (50.00%), Query Frame = 0
Query: 106 EHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTP 339
EH+A +VC R LP YP VL L T P +PFP G VHV NR HRPL V E + + + + +P ++G + ++T+ G VW++ ST+L +R + P +PP TA W LP ++GR+YA + D NPIH LAAKAFGFP I HGM+ + A C A E G+L EV +F P++LP +VGF P
Sbjct: 37 EHLARYNKVCGF-----GVRDELPITYPHVLGFASQIRLMTGPGFPFPLPGLVHVANRIRQHRPLRVSEPLSLHVALADL-RPHERGRQFDVVTTV-SVDGEEVWADVSTYL---RREGGASKEQAP--RAEPPAPTA-----RWRLPRDLGRRYADASGDRNPIHLHPLAAKAFGFPRAIAHGMW----SKARCVAAFE-----GRLPDAYEVDVRFKAPILLPGEVGFSSAP 244
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|518694485|ref|WP_019856178.1| (hypothetical protein [Actinopolyspora mortivallis]) HSP 1 Score: 129.798 bits (325), Expect = 2.179e-31 Identity = 90/270 (33.33%), Postives = 131/270 (48.52%), Query Frame = 0
Query: 106 EHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFIS-TLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTPIVATEGSKGGSGAAPRALRYEVLNKAGKIAVEGEF 374
H+A+ R+C + R LP YP + L T P +PFP +G VHV N H PLSV ++ +++ ++ KGT+ ++ T+ D G VW+ ST+L R P E+ P +T P + W LP ++GR+YA V+ D NPIH SA+ AKAFGFP I HGM+ +AA C A G+L V +F +PV+LP +V F TE +G P R+ + + +GK + G
Sbjct: 50 RHLAEYNRICGFDN-----RDELPLTYPHITAFPLAVKLMTDPGFPFPLVGLVHVANSITRHEPLSVTDQLTQRVRLS-GLRAHPKGTQFDVVTETVVD--GRTVWTETSTYL----RRGAGDPRAPGTSELAEPESTEP--SARWKLPGDLGRRYATVSGDRNPIHLSAVTAKAFGFPRAIAHGMW----SAARCLAAFA-----GRLPRSCAVDVEFAKPVLLPSRVEF-------TE----EAGEQPGRRRFALRSSSGKAHLRGSL 285
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|1087253033|emb|SDC86108.1| (MaoC like domain-containing protein [Alloactinosynnema iranicum]) HSP 1 Score: 129.028 bits (323), Expect = 4.631e-31 Identity = 86/231 (37.23%), Postives = 114/231 (49.35%), Query Frame = 0
Query: 106 EHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFIS-TLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGF 335
+H+AD RVCE + LP YP +L L T ++PFP +GSVHV NR R L V+E++ + V+ + +P KG + IS L D G VVW + ST+L + RE+ P + W P ++GR+YA V+ D NPIH AL+AK FGFP I HGM+ A C A E G+L V +F PV LP KVGF
Sbjct: 46 KHLADYNRVCEFRLTD-----ELPATYPHMLTFPMQVKLMTDADFPFPLVGSVHVANRITQTRALRVDEKFDLRVHVENL-RPHPKGRQFDMISEALVD--GEVVWHDVSTYLRRGSGGSGESGAGDERREL-------PSASAVWRAPEDIGRRYAEVSGDRNPIHLHALSAKLFGFPKAIAHGMW----TKARCLAAFE-----GRLPEAYTVDVRFKLPVFLPAKVGF 252
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|1033004612|gb|ANH39940.1| (bifunctional enoyl-CoA hydratase/phosphate acetyltransferase [Nocardioides dokdonensis FR1436]) HSP 1 Score: 129.413 bits (324), Expect = 4.828e-31 Identity = 80/234 (34.19%), Postives = 115/234 (49.15%), Query Frame = 0
Query: 107 HVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTPI 340
HV +C P + +P YP +L + + T P +P PAIG+VH+ N HR +S+ EE +V +P KGT F++ + GA++W ++S +L R P + E AP TTWSLP ++GR+YAAV+ D NPIH L AKA GFP I HGM+ + R C +E +L V V F +P++LP +V F P+
Sbjct: 60 HVDTYADLCGFPR-----KDVVPLTYPHLLAFGLHMAMMTDPAFPAPAIGTVHIANSVTRHRHVSIGEEVRVDARVG-AARPHAKGTVFDFVTEVHAADGALIWESSSAYL-RRGRGDDAAPEGRSFPE-------APPSGTTWSLPGDLGRRYAAVSGDRNPIHLYPLTAKALGFPRQIAHGMWSLAR----CVGALES-----RLPESVTVEVAFKKPILLPGRVAFGSRPV 270 The following BLAST results are available for this feature:
BLAST of EWM25031.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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