EWM25031.1, cds5620 (CDS) Nannochloropsis gaditana

Overview
NameEWM25031.1
Unique Namecds5620
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:455381..456066 +
Alignment locationCM002466.1:456310..456760 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25031.1
Productacyl dehydratase
Orig transcript idgnl|cribi|Naga_100049g34.2090.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:455381..456066 +
CM002466.1supercontigCM002466.1:456310..456760 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002539MaoC_dom
IPR029069HotDog_dom
Homology
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|585106667|gb|EWM25031.1| (acyl dehydratase [Nannochloropsis gaditana])

HSP 1 Score: 771.541 bits (1991), Expect = 0.000e+0
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 0
Query:    1 MAPSPLGAMLARVQAALPGNFVPVLATVVVGLLTLVLIAHVVEDHMSKGGTDTFYPSVANTRVLSYKLLTGALSKGSKWKKDVQKENFHLCDRVLSAQLSLLPHTEHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTPIVATEGSKGGSGAAPRALRYEVLNKAGKIAVEGEFFYRG 378
            MAPSPLGAMLARVQAALPGNFVPVLATVVVGLLTLVLIAHVVEDHMSKGGTDTFYPSVANTRVLSYKLLTGALSKGSKWKKDVQKENFHLCDRVLSAQLSLLPHTEHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTPIVATEGSKGGSGAAPRALRYEVLNKAGKIAVEGEFFYRG
Sbjct:    1 MAPSPLGAMLARVQAALPGNFVPVLATVVVGLLTLVLIAHVVEDHMSKGGTDTFYPSVANTRVLSYKLLTGALSKGSKWKKDVQKENFHLCDRVLSAQLSLLPHTEHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTPIVATEGSKGGSGAAPRALRYEVLNKAGKIAVEGEFFYRG 378          
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|1099501505|emb|SFS85726.1| (MaoC like domain-containing protein [Saccharopolyspora flava])

HSP 1 Score: 135.191 bits (339), Expect = 1.864e-33
Identity = 91/245 (37.14%), Postives = 124/245 (50.61%), Query Frame = 0
Query:  102 LPHTEHV-----------ADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGF 335
            LP TE+V           A+  RVC         R  LP  YP +L    +  L T   +PFP +G VHV NR    RP+ V +E   ++KV  + +P  KG +   + T     G VVW   ST+L + KR ++     KP RE++P + +      TW +PA +GR+YAAV+ D NPIH  AL AKAFGFP  I HGM+    + A C A +E     G+L     V   F +P++LP K  F
Sbjct:   29 LPETEYVRRGITVDPVELAEYNRVCGF-----RLRDELPVTYPHILSFPASVQLMTDKGFPFPLVGLVHVANRIQQDRPVLVTDELTQVVKVADL-RPHPKGKQFDVV-TETSVDGEVVWRETSTYLRVGKRDESAP--QKPRREIEPGSPSG-----TWRVPAGLGREYAAVSGDRNPIHLHALTAKAFGFPKAIAHGMW----SKARCLAALE-----GRLPEAFTVDVDFAKPLLLPSKADF 250          
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|1142763760|ref|WP_077010724.1| (hypothetical protein [Saccharothrix sp. ALI-22-I] >gi|1140165342|gb|ONI82731.1| hypothetical protein ALI22I_39685 [Saccharothrix sp. ALI-22-I])

HSP 1 Score: 132.88 bits (333), Expect = 1.054e-32
Identity = 96/255 (37.65%), Postives = 128/255 (50.20%), Query Frame = 0
Query:   85 KENFHLCDRVLSAQLSLLPHTEHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTP 339
            +    L +  L A++++ P  EH+A   +VC         R  LP  YP VL       L T  E+PFP  G VHV NR   HRPL V E  + L  V   ++P  +G +   ++T+  + G   W + ST+L    R     P  KP RE +PP  TA     TW LP ++GR+YA V+ D NPIH  AL AKAFGFP  I HGM+    + A C A  E     G+L    EV  +F  P+ LP +V F  +P
Sbjct:   18 RRGTELPESSLDAEITVDP--EHLARYNKVCGF-----GVRDELPITYPHVLGFGLQIRLMTGREFPFPLPGLVHVANRITQHRPLLVPEPLS-LHVVLANLRPHARGQQFDVVTTVCVE-GEEAWVDVSTYL----RRGRGVPERKPPRE-EPPVPTA-----TWRLPGDLGRRYADVSGDRNPIHLHALTAKAFGFPRAIAHGMW----SKARCLAAFE-----GRLPDAYEVDVRFKAPIPLPGEVDFSTSP 244          
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|739211344|ref|WP_037074732.1| (hypothetical protein [Pseudonocardia spinosispora])

HSP 1 Score: 130.568 bits (327), Expect = 1.114e-31
Identity = 84/236 (35.59%), Postives = 115/236 (48.73%), Query Frame = 0
Query:  108 VADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTPIVAT 343
            +AD  RVC  P         LP  +P VL   P   L T+P +P    G VH+  R  +HRP+  +E     ++   + +P  KGT+V  +S++   +G  VWS  ST+L         TPT   + E +P       +   W L  + GR+YAAV+ D NPIH   LAAKAFGFPG I HGM+     AA C A ++     G+L    ++   F +PVVLP  V   V     T
Sbjct:   48 LADYARVCGFPLDG-----RLPTTFPQVLSFGPQVQLMTEPGFPLRLPGLVHLRQRITVHRPIGADERLDLRVRAADL-RPHAKGTQVDLLSSV-TVSGEEVWSAVSTYL------SRGTPTGTAEAEREPAEVPDAPLAARWHLAGDTGRRYAAVSGDVNPIHLHPLAAKAFGFPGAIAHGMW----TAARCLATLQ-----GRLPEAYDLDVVFRKPVVLPSDVQLHVAHATGT 261          
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|491609461|ref|WP_005467019.1| (hypothetical protein [Saccharomonospora glauca] >gi|384523935|gb|EIF01131.1| acyl dehydratase [Saccharomonospora glauca K62])

HSP 1 Score: 130.568 bits (327), Expect = 1.239e-31
Identity = 85/232 (36.64%), Postives = 119/232 (51.29%), Query Frame = 0
Query:  107 HVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLR---DKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGF 335
            H+A   RVC    +       LP  YP VL       L T+P++PFP +G VH+ NR   HRP+ ++E++   ++ +  ++P  KGT+   IS L    D TG  VW++ ST+L  H+   +   + K   E+ PP  +A      W +P N+GR+YA V+ D NPIH   L A+AFGF   I HGM+      A C A  E     G+L     V  +F  PV LP KV F
Sbjct:   48 HLAAYNRVCGFRLTD-----DLPATYPHVLAFPLQMALMTQPDFPFPLLGMVHIANRITQHRPVRLDEKFTLRVRAE-NLRPHDKGTQFDVISELAPELDATGTPVWTDVSTYL--HRGPGSGGSSAK-KTELAPPAPSA-----VWPVPGNIGRRYAEVSGDRNPIHLHKLTARAFGFRSAIAHGMW----TKARCLAAFE-----GRLPDAYTVDVRFQLPVFLPAKVAF 256          
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|522152603|ref|WP_020663811.1| (hypothetical protein [Amycolatopsis benzoatilytica])

HSP 1 Score: 129.798 bits (325), Expect = 1.820e-31
Identity = 82/230 (35.65%), Postives = 118/230 (51.30%), Query Frame = 0
Query:  106 EHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGF 335
            EHVA    VC    S       LP  YP +L+      L T+P++PFP +G VHV NR   HRPL + E +   ++ +  ++P +KG +   +S  R  T  VVW+  ST+L  H+      P  +   ++ PPT TA      W++P ++GR+YA V+ D NPIH   L A+ FGFP  I HGM+    A A  +         G+L     VT +F +PV+LP +  F
Sbjct:   44 EHVAAYNEVCGFRFSD-----ELPVTYPHMLVFGLQMALMTEPDFPFPLLGLVHVENRITQHRPLRLGETFRVSVRAE-NLRPHEKGRQFDMVSEARAGT-EVVWTEVSTYL--HRSGSGSAPAAR--TQLTPPTPTA-----LWAIPGDIGRRYAEVSGDRNPIHLHPLTARMFGFPKAIAHGMWTKAHALASLE---------GRLPDAYTVTVRFKQPVLLPARAAF 248          
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|926386028|ref|WP_053714420.1| (dehydratase [Saccharothrix sp. NRRL B-16348] >gi|925611811|gb|KOX35113.1| dehydratase [Saccharothrix sp. NRRL B-16348])

HSP 1 Score: 129.413 bits (324), Expect = 2.031e-31
Identity = 86/234 (36.75%), Postives = 117/234 (50.00%), Query Frame = 0
Query:  106 EHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTP 339
            EH+A   +VC         R  LP  YP VL       L T P +PFP  G VHV NR   HRPL V E  +  + +  + +P ++G +   ++T+    G  VW++ ST+L   +R    +    P    +PP  TA      W LP ++GR+YA  + D NPIH   LAAKAFGFP  I HGM+    + A C A  E     G+L    EV  +F  P++LP +VGF   P
Sbjct:   37 EHLARYNKVCGF-----GVRDELPITYPHVLGFASQIRLMTGPGFPFPLPGLVHVANRIRQHRPLRVSEPLSLHVALADL-RPHERGRQFDVVTTV-SVDGEEVWADVSTYL---RREGGASKEQAP--RAEPPAPTA-----RWRLPRDLGRRYADASGDRNPIHLHPLAAKAFGFPRAIAHGMW----SKARCVAAFE-----GRLPDAYEVDVRFKAPILLPGEVGFSSAP 244          
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|518694485|ref|WP_019856178.1| (hypothetical protein [Actinopolyspora mortivallis])

HSP 1 Score: 129.798 bits (325), Expect = 2.179e-31
Identity = 90/270 (33.33%), Postives = 131/270 (48.52%), Query Frame = 0
Query:  106 EHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFIS-TLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTPIVATEGSKGGSGAAPRALRYEVLNKAGKIAVEGEF 374
             H+A+  R+C   +     R  LP  YP +        L T P +PFP +G VHV N    H PLSV ++    +++   ++   KGT+   ++ T+ D  G  VW+  ST+L    R     P      E+  P +T P  +  W LP ++GR+YA V+ D NPIH SA+ AKAFGFP  I HGM+    +AA C A        G+L     V  +F +PV+LP +V F       TE     +G  P   R+ + + +GK  + G  
Sbjct:   50 RHLAEYNRICGFDN-----RDELPLTYPHITAFPLAVKLMTDPGFPFPLVGLVHVANSITRHEPLSVTDQLTQRVRLS-GLRAHPKGTQFDVVTETVVD--GRTVWTETSTYL----RRGAGDPRAPGTSELAEPESTEP--SARWKLPGDLGRRYATVSGDRNPIHLSAVTAKAFGFPRAIAHGMW----SAARCLAAFA-----GRLPRSCAVDVEFAKPVLLPSRVEF-------TE----EAGEQPGRRRFALRSSSGKAHLRGSL 285          
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|1087253033|emb|SDC86108.1| (MaoC like domain-containing protein [Alloactinosynnema iranicum])

HSP 1 Score: 129.028 bits (323), Expect = 4.631e-31
Identity = 86/231 (37.23%), Postives = 114/231 (49.35%), Query Frame = 0
Query:  106 EHVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFIS-TLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGF 335
            +H+AD  RVCE   +       LP  YP +L       L T  ++PFP +GSVHV NR    R L V+E++   + V+ + +P  KG +   IS  L D  G VVW + ST+L         +      RE+       P  +  W  P ++GR+YA V+ D NPIH  AL+AK FGFP  I HGM+      A C A  E     G+L     V  +F  PV LP KVGF
Sbjct:   46 KHLADYNRVCEFRLTD-----ELPATYPHMLTFPMQVKLMTDADFPFPLVGSVHVANRITQTRALRVDEKFDLRVHVENL-RPHPKGRQFDMISEALVD--GEVVWHDVSTYLRRGSGGSGESGAGDERREL-------PSASAVWRAPEDIGRRYAEVSGDRNPIHLHALSAKLFGFPKAIAHGMW----TKARCLAAFE-----GRLPEAYTVDVRFKLPVFLPAKVGF 252          
BLAST of EWM25031.1 vs. NCBI_GenBank
Match: gi|1033004612|gb|ANH39940.1| (bifunctional enoyl-CoA hydratase/phosphate acetyltransferase [Nocardioides dokdonensis FR1436])

HSP 1 Score: 129.413 bits (324), Expect = 4.828e-31
Identity = 80/234 (34.19%), Postives = 115/234 (49.15%), Query Frame = 0
Query:  107 HVADIIRVCELPSSAPSPRVHLPFVYPAVLMVYPNCLLFTKPEYPFPAIGSVHVFNRTVIHRPLSVEEEYAALLKVDPVVKPAKKGTEVTFISTLRDKTGAVVWSNASTFLVLHKRLQTMTPTVKPDREVQPPTTTAPVMNTTWSLPANMGRQYAAVAKDNNPIHTSALAAKAFGFPGVIMHGMYFIVRAAAECQAVVEKSDGLGKLGYPVEVTAKFVRPVVLPHKVGFKVTPI 340
            HV     +C  P      +  +P  YP +L    +  + T P +P PAIG+VH+ N    HR +S+ EE     +V    +P  KGT   F++ +    GA++W ++S +L    R     P  +   E       AP   TTWSLP ++GR+YAAV+ D NPIH   L AKA GFP  I HGM+ + R    C   +E      +L   V V   F +P++LP +V F   P+
Sbjct:   60 HVDTYADLCGFPR-----KDVVPLTYPHLLAFGLHMAMMTDPAFPAPAIGTVHIANSVTRHRHVSIGEEVRVDARVG-AARPHAKGTVFDFVTEVHAADGALIWESSSAYL-RRGRGDDAAPEGRSFPE-------APPSGTTWSLPGDLGRRYAAVSGDRNPIHLYPLTAKALGFPRQIAHGMWSLAR----CVGALES-----RLPESVTVEVAFKKPILLPGRVAFGSRPV 270          
The following BLAST results are available for this feature:
BLAST of EWM25031.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106667|gb|EWM25031.1|0.000e+0100.00acyl dehydratase [Nannochloropsis gaditana][more]
gi|1099501505|emb|SFS85726.1|1.864e-3337.14MaoC like domain-containing protein [Saccharopolys... [more]
gi|1142763760|ref|WP_077010724.1|1.054e-3237.65hypothetical protein [Saccharothrix sp. ALI-22-I] ... [more]
gi|739211344|ref|WP_037074732.1|1.114e-3135.59hypothetical protein [Pseudonocardia spinosispora][more]
gi|491609461|ref|WP_005467019.1|1.239e-3136.64hypothetical protein [Saccharomonospora glauca] >g... [more]
gi|522152603|ref|WP_020663811.1|1.820e-3135.65hypothetical protein [Amycolatopsis benzoatilytica... [more]
gi|926386028|ref|WP_053714420.1|2.031e-3136.75dehydratase [Saccharothrix sp. NRRL B-16348] >gi|9... [more]
gi|518694485|ref|WP_019856178.1|2.179e-3133.33hypothetical protein [Actinopolyspora mortivallis][more]
gi|1087253033|emb|SDC86108.1|4.631e-3137.23MaoC like domain-containing protein [Alloactinosyn... [more]
gi|1033004612|gb|ANH39940.1|4.828e-3134.19bifunctional enoyl-CoA hydratase/phosphate acetylt... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5634rna5634Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications