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Properties
| Property Name | Value |
|---|
| Product | metaxin 1 |
| Orig transcript id | gnl|cribi|Naga_100049g38.2082.mrna |
| Orig protein id | gnl|cribi|Naga_100049g38.2082 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:443733..445458 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5629 ID=rna5629|Name=rna5629|organism=Nannochloropsis gaditana|type=mRNA|length=2070bp
GCACACCATTCTATTGGGATGAAAGACATGACAGAAAGCAGGCACCGAAA
TCGTTCCAATTTTTACACCTTGTCTTCATTAAGACGTAGCGGCATTCTCA
TGTCAGCATTGGCACGCACGATTCCTAGTCAACACATGGCACTTTTTCCT
GCAGCCCCTCCATGCGTCTTGAACAAAGGCGATAAGAAAGGGTTTAACTG
AGCATTTAAACCGTCGTCAGAGCCTCACACACACATGTATTTCGATACGC
GCGCAGGCCTTTCCCCTTGGGCCAATGCAAGCGGAACACAAGCCCCTACG
CGACCTGGATTCAGGGAGAGAAATTGTAAGGGTTCAGATCATTCACTTGG
CCCTTGCGGCCTGGGGATTGTCCTCATGGATTTTATTTAACGGTATGTAT
TCGGGGACGGATGCGTGCGTGGTGTGGGAAGTGAGCTGAAAGCCCGGTAG
AGGGAAGGAATGGCATGGCCACGCGTACACGATTCCAGGCTCGAGACCTC
CCCGCATTCGGCCAAGTGTATTCTGTATGTTACTGCCCCCTGTTCCGCAC
ATTCTGCTCGCATGAACACGTTCTCACTAAGTCTCTGCCCCTTCTGTGCC
GGGAGCAGGTCTATGGGGCCAGCTGCCGATGTTTGTGCGGACCCTGCCGG
AGGGAAACAAGCTGGGTGTGCTTATTTTGACGGCAGAGCAGCTCGCCTAC
ATCTTCCCCTTGCTCTTCATGTACAAAAAGCGCCACTTTAGCAACTCCCG
TCGATCACAAGAGGTACGACTCGAGCTTCCAAACCTCCAAATCAAGCCCA
CGCACCAGATTCTAATCCCTTCCCTCCTCCTCTTGAGCTGCTTGCTCCCT
CCCTCCAGACGATTGACACCTCTCCACACCTACCATCGTGGTTGCCCCTC
TTTCCATCCAGATCGACATTTGGATCCTCCTCGCCTCGGGGCTTGTCGTC
TCCCTCCTTCTCCCGCGCTACTGGCGGGCCCAAGTCCCTATCCAGGGCGT
ACCCCATAGCGCCGGCCTCCTCGTCCTCGCCTTTTTCACCGGCGCCGTCT
GCAGCAGCACGGGCGTGGTCTTCACGCCCTACCTGGCCACACTCCCCAAG
AGCTACACCTCCACCCACACGGCCGGGGCGGGGCTCAGTGGCCTGGCAAT
CGCCCTCCTCACCCTGGCGGCGGACGCCGGCTCCCTCCATCCCCGCCTCT
CCCCGGGGCACTACTTCAACCTCCTCTCCCTCGTCCTCCTCGTCGGCATG
GCGGCTTTCGGCTTCGTGAGCCGGCGCGTGCACGCCTCCGTCCAAGAGGA
GCGGGAAGAAGCCCGGGACGCCGAGCCTGCGGCCGGCATCGAGGAGGCGC
ATGGGCCGCGGCAGTACGGGACTCTGGCCGACCGGAGTCTGGAGGAGTCG
GGAGAGCGGCCTGACGGCGACCGCCACCCCCTCATCCCCCGTGGGGTCGA
CTCGGGAGACCCGCTGGAGGCGCCCGCGGACCCTTCCTCCTCCCTTCCCT
ACGCCTCCCCCCCTCCACTCTTCCCTCCCCTCTGTCCGAGACTCCCACGT
GGCGGTGTTCGGCTTGCAATGTCTCCTCTCCGCCCTCGCCTACGGCGTCG
TCCCTTCCACCCTCCCCATGGCCTGCACGGGCTACCAAAACCCCTCGCGG
GTCCTGCTGTTAGCCAATGGAGGCTTCATGTGCGCGGACCCCCTGGGAAA
GCTGGCCACGAGCTTTCTTCCCACCGGCCGAATCTTCATGTCCGGGGCAG
CAACCATCTGCCTTGCTGTCTTGCTCTTGTACTGCGCCTTCAGTGGGTCC
GCGCCCCCCCTGGCCCTTCGCCCGTACGGCGGAGTGCTGGTGGTGGTGGC
CAACACCATGTTCAGCTTCATGTTCTCTTTCACGTCCATATCCATTTTTT
TTCGACCGGCGGCGTCAGGAGGAAGCGGCGCGGGCCCGGAAGGCGGGGAG
GATCGGAGGCGACGGGGGCGACGCAGCGTACCAGTGGTTCGCATTGTCGG
CCTTCATGGTGCAGACGGGCGCGTTTTTGGGCACAGGCCTGTCCTTGGCT
GGCGTGCTCCTGTGGTCGTA back to topprotein sequence of rna5629 >rna5629-protein ID=rna5629-protein|Name=rna5629|organism=Nannochloropsis gaditana|type=polypeptide|length=473bp
MYKRNMLGTLASDCLLHQPLPTSPHPSSGSLMFSSDFFGTDFTKNPLGAN
KPSLCHEHAVEPTPIKAHAERSYPFVLLQFRPAFALQLYLRFVRAPYVVR
NLEYPVLETVGQLPVLMDGQFLLPEEDALGYLREHYPALDLDAKLSGARR
AQVLALHALVREKLAPAVGASRYRDERNFVQNVRAVILRATRFPLGPAIS
TAERRRGMQEQRWRGLADGGMGVGEVLTRAQCVYRELDNLLGASTGDFFF
GREPTSFDACLFGHLAEALADVNVLVLVSTFDNLMRFFGRIAEDFFNVGA
QAAASAASSSTSLSASLGGPVREPQGFSIASDLKECYRHADYMNNRNPFN
QVEAAKLCAEAPLVPEPMVQKFLEGGGLQGSGDASAGGRGEAGGAPGSSG
PADASGSTGTVGGRKKAEELEEERERRRENVLWLTVVGGVVSFFLLFQGV
LALATGEIEIVEEEEVDGEMEEE back to topmRNA from alignment at CM002466.1:443733..445458+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5629 ID=rna5629|Name=rna5629|organism=Nannochloropsis gaditana|type=mRNA|length=1726bp|location=Sequence derived from alignment at CM002466.1:443733..445458+ (Nannochloropsis gaditana)
TGCAGACAGTTAATCCCCCTCCGCGGTGCCTTGTGCTTGtgaaatggagg
aaatgcTCTCAGTTTGTCCAGCACGTGCAAAAAATGTTTTTAAGTAGTGG
TTTTTCTGGTATTGGAaatgaagggagagggagggctgctGCCTGAATAG
GAGGGCGATGCCATGCATGCGAGCCCTCCTTTGTACCTAATGTTTTGCTT
TGAGTGACACTGCGAAATCCATTGGCTTTGATTTATGTCTACAGCAACAT
GTACAAGAGAAACATGCTAGGAACCTTGGCCTCTGATTGTTTGTTGCACC
AACCCctgccaacctccccccatccttcctccggcAGCCTCATGTTCTCC
TCCGACTTCTTCGGCACGGACTTCACGAAGAACCCGCTGGGAGCCAACAA
GCCTTCCTTATGTCACGAGCATGCAGTCGAACCTACTCCCATAAAGGCGC
ATGCCGAGCGGAGCTATCCTTTCGTTCTCCTCCAGTTCCGCCCAGCTTTT
GCACTTCAACTTTACTTGCGCTTTGTGCGCGCTCCATACGTGGTTCGGAA
CCTGGAATATCCGGTTTTAGAGACTGTGGGACAACTTCCTGTCCTGATGG
ATGGGCAGTTCCTCTTGCCAGAAGAAGACGCCCTGGGGTACCTTCGTGAG
CATTATCCCGCCTTGGACTTGGACGCGAAACTCTCCGGCGCCCGACGTGC
GCAGGTACTGGCATTGCACGCCCTCGTACGAGAGAAGTTAGCTCCTGCCG
TGGGTGCTTCTCGCTACCGGGACGAACGCAATTTTGTCCAAAATGTGCGG
GCGGTCATCTTGCGTGCGACGCGCTTCCCCTTGGGCCCGGCCATCTCCAC
CGCCGAGCGCCGACGCGGTATGCAGGAGCAGCGGTGGCGGGGTCTGGCGG
ATGGGGGAATGGGTGTGGGGGAGGTCTTAACGCGTGCACAGTGCGTGTAC
CGGGAGCTGGACAACCTTTTGGGGGCCTCGACGGGTGATTTCTTCTTCGG
GCGCGAGCCCACCAGCTTCGACGCCTGCCTTTTCGGACACTTGGcagagg
ccctggccgaTGTGAACGTGCTGGTCCTTGTCTCTACCTTCGACAACCTC
ATGCGTTTTTTTGGACGGATTGCGGAGGATTTTTTCAACGTTGGGGCGCA
AGCTGCGGCAtctgctgcctcttcctcgacctcaCTCTCGGCGTCTCTGG
GTGGGCCCGTGCGAGAGCCGCAAGGCTTTTCGATCGCCTCCGACTTGAAA
GAATGCTATAGACACGCGGATTACATGAACAATCGCAACCCTTTCAATca
agtggaggcggccaaACTGTGTGCGGAAGCCCCCTTGGTTCCCGAGCCGA
TGGTTCAGAAGTTTctagagggaggaggactccAAGGGAGCGGCGACGCG
TcagctggagggagaggggaggcagggggcgcGCCCGGAAGCAGCGGTCC
CGCGGACGCGTCGGGGAGCACGGGTACggtggggggcaggaagaaagcag
aagagctggaggaggagcgagagaggcggagggagaatgTGTTGTGGTTG
ACAGTGGTAGGGGGGGTGGTGagctttttcttgcttttccaGGGGGTGCT
GGCGCTCGCGACGGGGGAAATAGAGattgtggaggaagaggaggtagacg
gagagatggaggaggaatgagtCATGTCTGGTGCACGCAGGGGGCAAGTA
AAAGAACACTCGCAGGATGAAGAGAG back to topCoding sequence (CDS) from alignment at CM002466.1:443733..445458+ >rna5629 ID=rna5629|Name=rna5629|organism=Nannochloropsis gaditana|type=CDS|length=1422bp|location=Sequence derived from alignment at CM002466.1:443733..445458+ (Nannochloropsis gaditana)
ATGTACAAGAGAAACATGCTAGGAACCTTGGCCTCTGATTGTTTGTTGCA
CCAACCCctgccaacctccccccatccttcctccggcAGCCTCATGTTCT
CCTCCGACTTCTTCGGCACGGACTTCACGAAGAACCCGCTGGGAGCCAAC
AAGCCTTCCTTATGTCACGAGCATGCAGTCGAACCTACTCCCATAAAGGC
GCATGCCGAGCGGAGCTATCCTTTCGTTCTCCTCCAGTTCCGCCCAGCTT
TTGCACTTCAACTTTACTTGCGCTTTGTGCGCGCTCCATACGTGGTTCGG
AACCTGGAATATCCGGTTTTAGAGACTGTGGGACAACTTCCTGTCCTGAT
GGATGGGCAGTTCCTCTTGCCAGAAGAAGACGCCCTGGGGTACCTTCGTG
AGCATTATCCCGCCTTGGACTTGGACGCGAAACTCTCCGGCGCCCGACGT
GCGCAGGTACTGGCATTGCACGCCCTCGTACGAGAGAAGTTAGCTCCTGC
CGTGGGTGCTTCTCGCTACCGGGACGAACGCAATTTTGTCCAAAATGTGC
GGGCGGTCATCTTGCGTGCGACGCGCTTCCCCTTGGGCCCGGCCATCTCC
ACCGCCGAGCGCCGACGCGGTATGCAGGAGCAGCGGTGGCGGGGTCTGGC
GGATGGGGGAATGGGTGTGGGGGAGGTCTTAACGCGTGCACAGTGCGTGT
ACCGGGAGCTGGACAACCTTTTGGGGGCCTCGACGGGTGATTTCTTCTTC
GGGCGCGAGCCCACCAGCTTCGACGCCTGCCTTTTCGGACACTTGGcaga
ggccctggccgaTGTGAACGTGCTGGTCCTTGTCTCTACCTTCGACAACC
TCATGCGTTTTTTTGGACGGATTGCGGAGGATTTTTTCAACGTTGGGGCG
CAAGCTGCGGCAtctgctgcctcttcctcgacctcaCTCTCGGCGTCTCT
GGGTGGGCCCGTGCGAGAGCCGCAAGGCTTTTCGATCGCCTCCGACTTGA
AAGAATGCTATAGACACGCGGATTACATGAACAATCGCAACCCTTTCAAT
caagtggaggcggccaaACTGTGTGCGGAAGCCCCCTTGGTTCCCGAGCC
GATGGTTCAGAAGTTTctagagggaggaggactccAAGGGAGCGGCGACG
CGTcagctggagggagaggggaggcagggggcgcGCCCGGAAGCAGCGGT
CCCGCGGACGCGTCGGGGAGCACGGGTACggtggggggcaggaagaaagc
agaagagctggaggaggagcgagagaggcggagggagaatgTGTTGTGGT
TGACAGTGGTAGGGGGGGTGGTGagctttttcttgcttttccaGGGGGTG
CTGGCGCTCGCGACGGGGGAAATAGAGattgtggaggaagaggaggtaga
cggagagatggaggaggaatga back to top
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