EWM25023.1, cds5615 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25023.1 vs. NCBI_GenBank
Match: gi|585106659|gb|EWM25023.1| (metaxin 1 [Nannochloropsis gaditana]) HSP 1 Score: 959.903 bits (2480), Expect = 0.000e+0 Identity = 473/473 (100.00%), Postives = 473/473 (100.00%), Query Frame = 0
Query: 1 MYKRNMLGTLASDCLLHQPLPTSPHPSSGSLMFSSDFFGTDFTKNPLGANKPSLCHEHAVEPTPIKAHAERSYPFVLLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLREHYPALDLDAKLSGARRAQVLALHALVREKLAPAVGASRYRDERNFVQNVRAVILRATRFPLGPAISTAERRRGMQEQRWRGLADGGMGVGEVLTRAQCVYRELDNLLGASTGDFFFGREPTSFDACLFGHLAEALADVNVLVLVSTFDNLMRFFGRIAEDFFNVGAQAAASAASSSTSLSASLGGPVREPQGFSIASDLKECYRHADYMNNRNPFNQVEAAKLCAEAPLVPEPMVQKFLEGGGLQGSGDASAGGRGEAGGAPGSSGPADASGSTGTVGGRKKAEELEEERERRRENVLWLTVVGGVVSFFLLFQGVLALATGEIEIVEEEEVDGEMEEE 473
MYKRNMLGTLASDCLLHQPLPTSPHPSSGSLMFSSDFFGTDFTKNPLGANKPSLCHEHAVEPTPIKAHAERSYPFVLLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLREHYPALDLDAKLSGARRAQVLALHALVREKLAPAVGASRYRDERNFVQNVRAVILRATRFPLGPAISTAERRRGMQEQRWRGLADGGMGVGEVLTRAQCVYRELDNLLGASTGDFFFGREPTSFDACLFGHLAEALADVNVLVLVSTFDNLMRFFGRIAEDFFNVGAQAAASAASSSTSLSASLGGPVREPQGFSIASDLKECYRHADYMNNRNPFNQVEAAKLCAEAPLVPEPMVQKFLEGGGLQGSGDASAGGRGEAGGAPGSSGPADASGSTGTVGGRKKAEELEEERERRRENVLWLTVVGGVVSFFLLFQGVLALATGEIEIVEEEEVDGEMEEE
Sbjct: 1 MYKRNMLGTLASDCLLHQPLPTSPHPSSGSLMFSSDFFGTDFTKNPLGANKPSLCHEHAVEPTPIKAHAERSYPFVLLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLREHYPALDLDAKLSGARRAQVLALHALVREKLAPAVGASRYRDERNFVQNVRAVILRATRFPLGPAISTAERRRGMQEQRWRGLADGGMGVGEVLTRAQCVYRELDNLLGASTGDFFFGREPTSFDACLFGHLAEALADVNVLVLVSTFDNLMRFFGRIAEDFFNVGAQAAASAASSSTSLSASLGGPVREPQGFSIASDLKECYRHADYMNNRNPFNQVEAAKLCAEAPLVPEPMVQKFLEGGGLQGSGDASAGGRGEAGGAPGSSGPADASGSTGTVGGRKKAEELEEERERRRENVLWLTVVGGVVSFFLLFQGVLALATGEIEIVEEEEVDGEMEEE 473
BLAST of EWM25023.1 vs. NCBI_GenBank
Match: gi|553189883|ref|XP_005855093.1| (hypothetical protein NGA_2054500, partial [Nannochloropsis gaditana CCMP526] >gi|422293967|gb|EKU21267.1| hypothetical protein NGA_2054500, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 218.009 bits (554), Expect = 1.689e-66 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
Query: 30 SLMFSSDFFGTDFTKNPLGANKPSLCHEHAVEPTPIKAHAERSYPFVLLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLR 133
SLMFSSDFFGTDFTKNPLGANKPSLCHEHAVEPTPIKAHAERSYPFVLLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLR
Sbjct: 1 SLMFSSDFFGTDFTKNPLGANKPSLCHEHAVEPTPIKAHAERSYPFVLLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLR 104
BLAST of EWM25023.1 vs. NCBI_GenBank
Match: gi|298711211|emb|CBJ32432.1| (Sorting and Assembly Machinery 35kDa protein [Ectocarpus siliculosus]) HSP 1 Score: 179.489 bits (454), Expect = 6.096e-48 Identity = 115/319 (36.05%), Postives = 159/319 (49.84%), Query Frame = 0
Query: 61 EPTPIKAHAERSYPFVLLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLREHYPALDLDAKLSGARRAQVLALHALVREKLAPAVGASRYR-DERNFVQNVRAVILRATRFPLGPAISTAERRRGMQEQRWRGLADGGMGVGEVLTRAQCVYRELDNLLGASTGDFFFGREPTSFDACLFGHLAEALADVNVLVLVSTFDNLMRFFGRIAEDFFNVGAQAAASAASSSTSLSASLGGPVREPQGFSIASDLKECYRHADYMNNRNPFNQVEAAKLCAEAPLVPEPMVQKFLEGGGL 378
+P P+ H V+ QFRPA+ +Q +LRFVR PY V N Y G P L DGQF+L EDA G++ D+D L+ A + + AL LVRE L P + RY DE Q V + +A +PL AE RR +E RGL + E++ RA+ +Y LD LG S FFFG PTS DA +FGHLAEA +L L+ FDNL R F + +++F G+ S+ + S G R L++ ADY+N+ N FNQ+ LC+E P + +P + + G+
Sbjct: 36 QPGPVITHGSALDVMVVTQFRPAWEIQAHLRFVRLPYRVENSSYMGSAATGLYPALTDGQFVLRSEDAAGHIASRRS--DVDVGLTEAEKVEAQALAMLVREGLQPLLRVMRYMGDEGEVRQTVHPPMKKALSWPLSWWSPAAEGRRSKRESAVRGL--DRLSKAELIGRAKEMYAALDLRLGNSKEAFFFGSRPTSVDAVVFGHLAEAWTIAVLLDLLPAFDNLSRLFRHVCDNYFRPGSFPPPSSGGEGVAESKKSGSEDR----------LRDAMLRADYVNSHNAFNQLAGCALCSEVPYIEDPYPPRPIANAGI 340
BLAST of EWM25023.1 vs. NCBI_GenBank
Match: gi|1173953647|gb|OQS01175.1| (hypothetical protein ACHHYP_01722 [Achlya hypogyna]) HSP 1 Score: 122.865 bits (307), Expect = 2.342e-27 Identity = 76/227 (33.48%), Postives = 117/227 (51.54%), Query Frame = 0
Query: 76 VLLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLREHYPALDLDAKLSGARRAQVLALHALVREKLAPAVGASRYRDERNFVQNVRAVILRATRFPLGPAISTAERRRGMQEQRWRGLADGGMGVGE-VLTRAQCVYRELDNLLGASTGDFFFGREPTSFDACLFGHLAEALADVNVLVLVSTF-DNLMRFFGRIAEDFFNVGA 300
L QF PA+ +Q Y+RF P ++N +YP E G+LP L DG +LL ++D + +L+ ++ D+DA L+ A++ + LA A+V+EKL + R+ D + + R I R FPL + + M LA G E V A+ Y L+ L AS G +FFG P++ DA +FGHL +AL+DV + +V L+ F + FF +
Sbjct: 53 TLHQFLPAWDVQAYVRFAEIPLHIKNAKYPSFEATGELPQLRDGHYLLGKDDIIMHLQTYHK--DIDASLTDAQKGESLAFKAMVQEKLHRVLLYCRWVDPITYKEVTRPAITRVLPFPLSRILP-----KQMHSSMAAKLAAAGYETQEQVYIAARDCYSALNARLEASAGPYFFGSSPSALDAVVFGHLVDALSDVQLRDVVHVHGPRLLSFAEHVRAAFFGTAS 272
BLAST of EWM25023.1 vs. NCBI_GenBank
Match: gi|813125864|ref|XP_012196845.1| (hypothetical protein SPRG_02868 [Saprolegnia parasitica CBS 223.65] >gi|641538560|gb|KDO32391.1| hypothetical protein SPRG_02868 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 119.398 bits (298), Expect = 4.572e-26 Identity = 76/232 (32.76%), Postives = 119/232 (51.29%), Query Frame = 0
Query: 76 VLLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLREHYPALDLDAKLSGARRAQVLALHALVREKLAPAVGASRYRDERNFVQNVRAVILRATRFPLGPAISTAERRRGMQEQRWRGLADGGMGVGE-VLTRAQCVYRELDNLLGASTGDFFFGREPTSFDACLFGHLAEALADVNVLVLVSTF-DNLMRFFGRIAEDFFNVGAQAAAS 305
L QF PA+ +Q Y+RF + P ++N +YP E G+LP L DG +LL ++D + +L+ ++ D+D LS ++ + LA ++V+EKL + R+ D + + R + R FPL + + M LA G E V A+ Y L+ LG G FF+G PTS DA +FGHL +AL+DV + +V L+ F + +F G++A S
Sbjct: 53 TLHQFLPAYDVQAYVRFAKIPLHIKNAKYPSFEATGELPQLRDGHYLLAKDDIIMHLQTYH--TDIDGHLSAVQKGESLAFKSMVQEKLQRVLHYCRWVDPITYKEVTRPAVQRVLPFPLNRVLP-----KKMHHAMTSELATAGYASQEQVYVAARDCYAALNARLG--DGPFFYGAAPTSLDAIVFGHLVDALSDVQLRDVVHIHGPRLLSFAETVRSTYF--GSKAMGS 273
BLAST of EWM25023.1 vs. NCBI_GenBank
Match: gi|698785631|ref|XP_009825859.1| (hypothetical protein H257_03453 [Aphanomyces astaci] >gi|574118687|gb|ETV84167.1| hypothetical protein H257_03453 [Aphanomyces astaci]) HSP 1 Score: 119.398 bits (298), Expect = 5.070e-26 Identity = 77/239 (32.22%), Postives = 120/239 (50.21%), Query Frame = 0
Query: 77 LLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLREHYPALDLDAKLSGARRAQVLALHALVREKLAPAVGASRYRDERNFVQNVRAVILRATRFPLGPAISTAERRRGMQEQRWRGLADGGMGVGEVLTRAQCVYRELDNLLGASTGDFFFGREPTSFDACLFGHLAEALADVNVLVLVSTF-DNLMRFFGRIAEDFFNVGAQAAASAASSSTSLS 314
L QF PA+ +Q Y RF + N +YP ET G LP L DG FL+P D + +L+ +Y DLDA L+ +RA+ +A ALV+EKLA + ++ D + + R + R FPL + R + + V A+ Y L++ L AS G +FFG P++ DA +FGH+ +AL+D + +V+ L++F + +F A AA S+S + +
Sbjct: 59 LHQFFPAWDVQAYARFAEIKLHMVNSQYPEYETTGALPQLNDGHFLVPAGDIILHLQTYYK--DLDAPLTDKQRAESIAFRALVQEKLARVLDYCQWVDPITYSEVTRPAVQRVMPFPLNRVVPKLLHVRHTAAFH---ASTSLLSKEHVYLTARDSYVALNSFLEASDGPYFFGTNPSAVDAVVFGHVVDALSDCQLREVVAIHGPRLVQFASHVRHAYFESAAHAALCTQSTSNAFA 292
BLAST of EWM25023.1 vs. NCBI_GenBank
Match: gi|669163752|ref|XP_008617438.1| (hypothetical protein SDRG_13134 [Saprolegnia diclina VS20] >gi|530730861|gb|EQC29103.1| hypothetical protein SDRG_13134 [Saprolegnia diclina VS20]) HSP 1 Score: 117.857 bits (294), Expect = 1.837e-25 Identity = 78/249 (31.33%), Postives = 124/249 (49.80%), Query Frame = 0
Query: 76 VLLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLREHYPALDLDAKLSGARRAQVLALHALVREKLAPAVGASRYRDERNFVQNVRAVILRATRFPLGPAISTAERRRGMQEQRWRGLADGGMGVGE-VLTRAQCVYRELDNLLGASTGDFFFGREPTSFDACLFGHLAEALADVNVLVLVSTF-DNLMRFFGRIAEDFFN---VGAQAAASAASSSTSLSASLGG 319
L QF PA+ +Q Y+RF + P ++N +YP E G LP L DG +LL ++D + +L+ ++ D+D LS ++ + LA ++V+EKL + R+ D + + R + R FPL + + M LA G E V A+ Y L+ LG G FF+G PTS DA +FGHL +AL+DV + +V L+ F + +F +G+ + S ++LS + G
Sbjct: 53 TLHQFLPAYDVQAYVRFAKIPLHIKNAKYPSFEATGDLPQLRDGHYLLAKDDIIMHLQTYH--TDIDGHLSATQKGESLAFKSMVQEKLQRVLLFCRWVDPITYKEVTRPAVQRVLPFPLNRVLP-----KKMHHAMTSELATAGYASQEQVYVAARDCYAALNARLG--DGPFFYGAAPTSLDAVVFGHLVDALSDVQLRDVVQIHGPRLLTFAETVRSTYFGSKAMGSLWTENVPSPFSTLSTAFMG 292
BLAST of EWM25023.1 vs. NCBI_GenBank
Match: gi|1173949097|gb|OQR97170.1| (hypothetical protein THRCLA_07078 [Thraustotheca clavata]) HSP 1 Score: 115.161 bits (287), Expect = 1.287e-24 Identity = 73/224 (32.59%), Postives = 116/224 (51.79%), Query Frame = 0
Query: 76 VLLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLREHYPALDLDAKLSGARRAQVLALHALVREKLAPAVGASRYRDERNFVQNVRAVILRATRFPLGPAISTAERRRGMQEQRWRGLADGGMGVGE-VLTRAQCVYRELD-NLLGASTGDFFFGREPTSFDACLFGHLAEALADVNVLVLVSTF-DNLMRFFGRIAEDFF 296
VLLQF PA+ +Q YLRF + ++N +YP E G+LP L DG +LL ++D + +L+ ++ D+D +L+ ++ + LA ++V+EKL + R+ D + + R + R FPL + + M LA G E V A+ Y L+ L G +F+G PTS DA +FGHL +AL+DV + +V L+ F I + +F
Sbjct: 51 VLLQFMPAWDVQAYLRFAKIGMHIKNAKYPSFEATGELPQLNDGHYLLGKDDIIMHLQTYHK--DIDMELNDVQKGESLAFKSMVQEKLHRVLLYCRWVDPITYKEVTRPAVQRVLPFPLSRILP-----KQMHVSITNMLAANGYETQEQVYITARDCYSALNARLESVKDGPYFYGSTPTSLDALVFGHLVDALSDVQLRDVVHIHGSRLITFAEHIRDTYF 267
BLAST of EWM25023.1 vs. NCBI_GenBank
Match: gi|673019194|ref|XP_008863558.1| (hypothetical protein H310_01977 [Aphanomyces invadans] >gi|574480472|gb|ETW07465.1| hypothetical protein H310_01977 [Aphanomyces invadans]) HSP 1 Score: 112.464 bits (280), Expect = 1.326e-23 Identity = 75/233 (32.19%), Postives = 118/233 (50.64%), Query Frame = 0
Query: 77 LLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLREHYPALDLDAKLSGARRAQVLALHALVREKLAPAVGASRYRDERNFVQNVRAVILRATRFPLG---PAISTAERRRGMQEQRWRGLADGGMGVGEVLTRAQCVYRELDNLL--GASTGDFFFGREPTSFDACLFGHLAEALADVNVLVLVSTF-DNLMRFFGRIAEDFFNVGAQAA 303
L QF PA+ +Q Y RF + + N YP E G LP L DG FL+P D + +L+ +Y DLDA LS +RA+ +A A+V+EKLA + ++ D + + R + R FPL P + A + + V A+ Y L++ L A+ G FFFG EP++ DA +FGH+ +AL+D + +++ L++F + + +F+ A AA
Sbjct: 60 LHQFFPAWEVQAYARFAQIKLHMVNARYPEYEATGMLPQLNDGHFLVPTGDIILHLQTYYK--DLDANLSDKQRAESVAFRAIVQEKLARVLDYCQWVDPITYSEVTRPAVQRVMPFPLNRIVPKLLHARHTAAFHA------SSSLLSKEHVYLTARDSYVALNSFLEESANRGSFFFGDEPSALDAVVFGHVVDALSDGQLREVIAIHGPRLVQFATHVRDVYFDSAAHAA 284
BLAST of EWM25023.1 vs. NCBI_GenBank
Match: gi|1214705429|gb|OWZ17126.1| (putative mitochondrial protein [Phytophthora megakarya]) HSP 1 Score: 106.301 bits (264), Expect = 1.821e-21 Identity = 84/305 (27.54%), Postives = 145/305 (47.54%), Query Frame = 0
Query: 32 MFSSDFFGTDFTKNPLGANKPSLCHEHAVEPTPIKAHAERSY----PFVLLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLREHYPALDLDAKLSGARRAQVLALHALVREKLAPAVGASRYRDERNFVQNVRAVILRATRFPLGPAISTAERRRGMQEQRWRGLADGGMGVGEVLTRAQCVYRELDNLLGASTGDFFFGREPTSFDACLFGHLAEALADVNVLVLVSTFDNLMRFFG-RIAEDFFNVGAQAAASAASSSTSLSASLGGPVREPQGFSIAS 331
MF D F +PLG + L H+ V+ T +++ + S VL QF PA+ +Q YLR V N +YP E G+LP L DG FLLP+E+ + +L+ + D+D LS A+R++ A +++ EKL + R+ D + + R + R FPL + M++ R G++ V+ R C Y L+ L ++ +FFG +P++ D +FGH+ +A+++ ++ V L+ RI + +F + S + + ++ + +P FS S
Sbjct: 1 MFPEDRF------HPLGPDADRL-HDDLVDATELESTPKTSQQLGSTLVLHQFLPAWDVQAYLRIAGIRLHVHNSKYPTYEATGELPQLSDGNFLLPKEEIIMHLQTFHK--DIDEFLSDAQRSESYAYRSMLSEKLQRVMLYCRWVDPATYREVTRPHMKRNIPFPLNLFLPKKMHLDTMEKLRMYGISTKEQAY--VIAR-DC-YTALNTKLESAGTPYFFGDQPSALDVAVFGHIVDAMSNSQLVATVHQHAPLLIALAERIRDAYFGARGEQPTSLSEEAEAVYSE-----NQPNYFSTTS 287 The following BLAST results are available for this feature:
BLAST of EWM25023.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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