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Properties
| Property Name | Value |
|---|
| Product | translation initiation factor eif-2b subunit beta |
| Orig transcript id | gnl|cribi|Naga_100098g19.5265.mrna |
| Orig protein id | gnl|cribi|Naga_100098g19.5265 |
| Gene | EIF2Bbeta |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:429359..430781 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5622 ID=rna5622|Name=rna5622|organism=Nannochloropsis gaditana|type=mRNA|length=1933bp
GTAATCTTTTCGCGTTAGTAAACCGACACAGCCCCTTAGATTGATAACAT
CGATGGTAGGATCGCCTCACAGTATAACAGAGGACACTGGGTGCCATGCT
GATGCACCTACCACGTTCAGGGGAGCGCGGCCTCTGCAGCGTAAAGCTTG
GTTGCATTTGGCGACTGCCAGTTCCTCCGCCTCCGATACGACATCGTCTC
CGTCCACAAACAATGATGTAATGCGTAAGCGACCTGGTCCCCTTACCAAC
ATTCCGCTGCTGGACTCCGCAAGCCAAGCATCCTCGTCTGTATCCTCTCA
GGCATCGCGCTTCCCTTTTATCTCGCCGATGGAGCCATTAGTTACCCTGG
CTCGTTTCAGTCGATACATGAATAAAGTATACATCCCTCTAGATGATGAA
GAGGAGTTGGAAGTGGGCGAGCATGGATTTCAATTACTCAACGGTAAAGG
CAGTAACTTTGCCCTGCTAGGTACACCTGGAAGCAGCCTTCTTGGGGCGG
GGGCTTATGGCCATGTGTACAAGGCAATCCACTTTCCAACCATGCGGCGC
GTTGCCATCAAAAAGATCCCCAAAGATTTTGGGCGCACCAATGATTTCAC
TAACAGCTTTGCTAGAGAACTGCGGAATCTGTACAGCAACGTTAGAAAAA
TCACGGATGTCACAAAAAGTGCACGTACGGTACAAGAAAATGATGGAGGG
CATTGCCCTTTTTTGCTGACATTATACGATGCATACGTGGAAAAGAACCC
TACAAACTTATGTTTGGTATTGGAGTATATGGAAGGAGGCTCTCTGGAGC
AGATGATGCTCCAGAACCCAAGAGGTTGCCGCGACGAGGGCTTCTTGCGC
GAGGTCTGCCACAACGTCTTGAAGGGCCTTAACTACCTGCATAACCGCCA
GTACCTGCACCAGGACGTGAAGCCCGGCAATATTCTCCTCACTCTCACCA
ACTTCGCCAAGCTGGCAGATTTTGGTTTGACTGTGGACGTAAATGCTGGG
GCGGATGTTTTGGGCGAGAGTTATTGCGCGGCGGTGGCAGTGGGATCGGC
TCGGTACTGGGCGCCGGAGCTATGGGGTCCGGAAAAGCCTCTTCAAAGCT
GCAGAACGCGGTCGCAGGTGGAGATTGAAATGGGGGAGGCATGGAAGGAA
GCTTTCATCAACCACCAGTCATGCCGCGTGGCCGCCGAAGCTCGCGGTAT
CTTCAGTTCAACTGCCCTCCAGGGGCTCTCTCCCCCTTTTCAAGACTTCC
TTTCAAAGTGTCTACGAGATGTAGCTGACCGTCCTACAGTCGCGGACCTG
CTGCAGCATCGCTTTATTAAAGAATACAACAAAAGTTTGTCTCGGCGACA
ACGAGAGCTGGACGAGGCAGTGCAAGCCCTCAGAACGCACATCCAAATAC
ACAAGGAGTGGAAAATCACGCCGAAGATGGTAGAACTACTGGCTGACGAA
CTACGGATCCCGAGCAGCGATTTGCAGGAGTACTTAGAAGAGCACGTGGA
ACCAGGCCTAATGCGCACCCTGGGGACCTCGGCCGCATTATGTGTCGAAA
AGCTGGTTGATGAGGGAGAAAGAAACGCTGTGACGGGTGCGGGAGGAAAC
GAAAAGGAAACGAGAGTCGAGACGGAAGGAGGAGGGCTGGTGGAGGAAGG
AAGGGAGGTGGATGAAATTGAGGACGAGGAGGAGAGTGAAACGTCAGGAT
CCAAATCTGGATCTTCAAGCAGTTTGCAACGAAACTTTTTGAGCCATTAC
GACGAACTGGACAGGCTTCGCACCGTGGTGATTCCCGCTTTGGAAGGCTC
CGTACTGGCCTTACAGAAGCAGTTGCTTGCGAAAGATGAGGACTTGGCAG
AGATGAAGCAAGAGAATGAGTTACTGCGACAGCAATTGATGCAGACGACG
GCAGAATTTGCCACACCGCGAGGGTGTATCTAG back to topprotein sequence of rna5622 >rna5622-protein ID=rna5622-protein|Name=rna5622|organism=Nannochloropsis gaditana|type=polypeptide|length=362bp
MKSSVAPSGKDLDAWLSTWPHVHGQYRSLITSLQRRKVAGSLPCAKMTIE
LLKAVMGTCRWTTAAELMSVVKRVGKALVDAQPLQLVVGNVVRRILFIIR
EEHKNKLREVRAREGGATASLSDDGEAGNELEASVPGLRTGVMEAIGELQ
LELDNVYNEICELALEHIHANEVILTVGRSKTVETFLREAAERRRAFEVI
VAESAPDIAGREMAKSLAAAGIETTVISDSAVYAIMARVNQVLLPCRALI
ANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRS
PSALIEYADTQLLPEADFLNPAYDYVPPELVDLYITNTGGHQTFYLYRLL
GEYYHHDDSSLD back to topmRNA from alignment at CM002466.1:429359..430781- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5622 ID=rna5622|Name=rna5622|organism=Nannochloropsis gaditana|type=mRNA|length=1423bp|location=Sequence derived from alignment at CM002466.1:429359..430781- (Nannochloropsis gaditana)
ATCACAAGCATCGAAATCATTGATTGCTTCCCTCTCATCTTCATACAAAT
GATACAGAGGAAGCTTCATGAAATCCTCTGTAGCCCCATCAGGGAAGGAC
CTGGATGCCTGGCTGTCAACGTGGCCGCATGTACACGGGCAATATCGATC
CCTTATCACAAGGTGAGAGACTGGCGTAAGGAGACAAACATGATCGATGA
AACGCCCAATATCCGTATATTGGTCTAGTGATCGACTCTCGCGTTCATTT
TTCTCCTCTTCCAGTCTGCAGCGGCGGAAAGTGGCAGGCTCACTACCATG
CGCCAAGATGACCATCGAGTTGCTGAAGTAAGTTCCAGTGGCTCGGCGGG
ATCCGACACGTCCCAAATCGGAGGAGAACTGAATTTTAAAGACGAAGTCA
CCGACCCTAATTGTGTGCTCGTCTCTCCAATACAACTACAGGGCAGTAAT
GGGCACCTGTCGGTGGACGACAGCGGCCGAGCTCATGAGCGTGGTCAAGC
GCGTGGGCAAGGCCCTGGTCGACGCGCAGCCCCTCCAGCTCGTCGTAGGA
AATGTAGTGCGTCGGATCCTTTTCATCATCCGAGAGGAGCATAAAAACAA
GCTGCGGGAGGTTCGTGCCCGCGAAGGGGGAGCCACCGCGTCCTTGTCCG
ACGACGGCGAGGCAGGAAACGAGCTGGAGGCAAGCGTACCAGGGCTCCGG
ACGGGCGTCATGGAGGCGATCGGAGAGCTTCAGTTGGAACTGGACAATGT
GTACAATGAGATATGCGAACTCGCCCTTGAGCATATCCACGCGAATGAGG
TGATCCTGACGGTGGGCAGGTCGAAGACGGTGGAAACCTTCCTTCGAGAG
GCTGCTGAGAGACGGCGGGCCTTTGAGGTGATAGTTGCGGAGTCGGCCCC
GGACATCGCAGGGCGGGAGATGGCCAAGAGCCTGGCAGCCGCGGGGATTG
AGACCACCGTCATAAGCGACAGTGCCGTATACGCAATCATGGCGCGGGTG
AATCAGGTCCTCCTGCCATGCCGAGCACTGATAGCGAACGGGGGGCTGAT
CGCACCCTGCGGGGGGCACATGGCGGCGTTGGCGGCCAAGGAGCTGTCAG
TGCCCGTGGTGTGCGTGACGGGGCTGTTCAAACTCTCCCCAGTGTACCGG
CACGATCAAGACGCCTTCAACGACCTCAGGTCCCCCAGCGCCCTGATCGA
GTACGCCGACACCCAGCTCTTGCCGGAGGCAGATTTCTTGAATCCGGCCT
ACGACTACGTGCCTCCCGAACTGGTGGACCTGTACATAACCAACACTGGC
GGTCACCAGACCTTTTACTTGTACCGACTTCTGGGCGAGTACTACCATCA
TGACGACTCGAGTTTGGACTAGGGCTCGGGGGGGGCGGGGGGATAAAGTG
GGGAGGCAACGAGCTTGCATGCA back to topCoding sequence (CDS) from alignment at CM002466.1:429359..430781- >rna5622 ID=rna5622|Name=rna5622|organism=Nannochloropsis gaditana|type=CDS|length=3267bp|location=Sequence derived from alignment at CM002466.1:429359..430781- (Nannochloropsis gaditana)
GGCAGTAATGGGCACCTGTCGGTGGACGACAGCGGCCGAGCTCATGAGCG
TGGTCAAGCGCGTGGGCAAGGCCCTGGTCGACGCGCAGCCCCTCCAGCTC
GTCGTAGGAAATGTAGTGCGTCGGATCCTTTTCATCATCCGAGAGGAGCA
TAAAAACAAGCTGCGGGAGGTTCGTGCCCGCGAAGGGGGAGCCACCGCGT
CCTTGTCCGACGACGGCGAGGCAGGAAACGAGCTGGAGGCAAGCGTACCA
GGGCTCCGGACGGGCGTCATGGAGGCGATCGGAGAGCTTCAGTTGGAACT
GGACAATGTGTACAATGAGATATGCGAACTCGCCCTTGAGCATATCCACG
CGAATGAGGTGATCCTGACGGTGGGCAGGTCGAAGACGGTGGAAACCTTC
CTTCGAGAGGCTGCTGAGAGACGGCGGGCCTTTGAGGTGATAGTTGCGGA
GTCGGCCCCGGACATCGCAGGGCGGGAGATGGCCAAGAGCCTGGCAGCCG
CGGGGATTGAGACCACCGTCATAAGCGACAGTGCCGTATACGCAATCATG
GCGCGGGTGAATCAGGTCCTCCTGCCATGCCGAGCACTGATAGCGAACGG
GGGGCTGATCGCACCCTGCGGGGGGCACATGGCGGCGTTGGCGGCCAAGG
AGCTGTCAGTGCCCGTGGTGTGCGTGACGGGGCTGTTCAAACTCTCCCCA
GTGTACCGGCACGATCAAGACGCCTTCAACGACCTCAGGTCCCCCAGCGC
CCTGATCGAGTACGCCGACACCCAGCTCTTGCCGGAGGCAGATTTCTTGA
ATCCGGCCTACGACTACGTGCCTCCCGAACTGGTGGACCTGTACATAACC
AACACTGGCGGTCACCAGACCTTTTACTTGTACCGACTTCTGGGCGAGTA
CTACCATCATGACGACTCGAGTTTGGACTAGTCTGCAGCGGCGGAAAGTG
GCAGGCTCACTACCATGCGCCAAGATGACCATCGAGTTGCTGAAATGAAA
TCCTCTGTAGCCCCATCAGGGAAGGACCTGGATGCCTGGCTGTCAACGTG
GCCGCATGTACACGGGCAATATCGATCCCTTATCACAAGGGCAGTAATGG
GCACCTGTCGGTGGACGACAGCGGCCGAGCTCATGAGCGTGGTCAAGCGC
GTGGGCAAGGCCCTGGTCGACGCGCAGCCCCTCCAGCTCGTCGTAGGAAA
TGTAGTGCGTCGGATCCTTTTCATCATCCGAGAGGAGCATAAAAACAAGC
TGCGGGAGGTTCGTGCCCGCGAAGGGGGAGCCACCGCGTCCTTGTCCGAC
GACGGCGAGGCAGGAAACGAGCTGGAGGCAAGCGTACCAGGGCTCCGGAC
GGGCGTCATGGAGGCGATCGGAGAGCTTCAGTTGGAACTGGACAATGTGT
ACAATGAGATATGCGAACTCGCCCTTGAGCATATCCACGCGAATGAGGTG
ATCCTGACGGTGGGCAGGTCGAAGACGGTGGAAACCTTCCTTCGAGAGGC
TGCTGAGAGACGGCGGGCCTTTGAGGTGATAGTTGCGGAGTCGGCCCCGG
ACATCGCAGGGCGGGAGATGGCCAAGAGCCTGGCAGCCGCGGGGATTGAG
ACCACCGTCATAAGCGACAGTGCCGTATACGCAATCATGGCGCGGGTGAA
TCAGGTCCTCCTGCCATGCCGAGCACTGATAGCGAACGGGGGGCTGATCG
CACCCTGCGGGGGGCACATGGCGGCGTTGGCGGCCAAGGAGCTGTCAGTG
CCCGTGGTGTGCGTGACGGGGCTGTTCAAACTCTCCCCAGTGTACCGGCA
CGATCAAGACGCCTTCAACGACCTCAGGTCCCCCAGCGCCCTGATCGAGT
ACGCCGACACCCAGCTCTTGCCGGAGGCAGATTTCTTGAATCCGGCCTAC
GACTACGTGCCTCCCGAACTGGTGGACCTGTACATAACCAACACTGGCGG
TCACCAGACCTTTTACTTGTACCGACTTCTGGGCGAGTACTACCATCATG
ACGACTCGAGTTTGGACTAGTCTGCAGCGGCGGAAAGTGGCAGGCTCACT
ACCATGCGCCAAGATGACCATCGAGTTGCTGAAATGAAATCCTCTGTAGC
CCCATCAGGGAAGGACCTGGATGCCTGGCTGTCAACGTGGCCGCATGTAC
ACGGGCAATATCGATCCCTTATCACAAGGGCAGTAATGGGCACCTGTCGG
TGGACGACAGCGGCCGAGCTCATGAGCGTGGTCAAGCGCGTGGGCAAGGC
CCTGGTCGACGCGCAGCCCCTCCAGCTCGTCGTAGGAAATGTAGTGCGTC
GGATCCTTTTCATCATCCGAGAGGAGCATAAAAACAAGCTGCGGGAGGTT
CGTGCCCGCGAAGGGGGAGCCACCGCGTCCTTGTCCGACGACGGCGAGGC
AGGAAACGAGCTGGAGGCAAGCGTACCAGGGCTCCGGACGGGCGTCATGG
AGGCGATCGGAGAGCTTCAGTTGGAACTGGACAATGTGTACAATGAGATA
TGCGAACTCGCCCTTGAGCATATCCACGCGAATGAGGTGATCCTGACGGT
GGGCAGGTCGAAGACGGTGGAAACCTTCCTTCGAGAGGCTGCTGAGAGAC
GGCGGGCCTTTGAGGTGATAGTTGCGGAGTCGGCCCCGGACATCGCAGGG
CGGGAGATGGCCAAGAGCCTGGCAGCCGCGGGGATTGAGACCACCGTCAT
AAGCGACAGTGCCGTATACGCAATCATGGCGCGGGTGAATCAGGTCCTCC
TGCCATGCCGAGCACTGATAGCGAACGGGGGGCTGATCGCACCCTGCGGG
GGGCACATGGCGGCGTTGGCGGCCAAGGAGCTGTCAGTGCCCGTGGTGTG
CGTGACGGGGCTGTTCAAACTCTCCCCAGTGTACCGGCACGATCAAGACG
CCTTCAACGACCTCAGGTCCCCCAGCGCCCTGATCGAGTACGCCGACACC
CAGCTCTTGCCGGAGGCAGATTTCTTGAATCCGGCCTACGACTACGTGCC
TCCCGAACTGGTGGACCTGTACATAACCAACACTGGCGGTCACCAGACCT
TTTACTTGTACCGACTTCTGGGCGAGTACTACCATCATGACGACTCGAGT
TTGGACTAGTCTGCAGCGGCGGAAAGTGGCAGGCTCACTACCATGCGCCA
AGATGACCATCGAGTTGCTGAAATGAAATCCTCTGTAGCCCCATCAGGGA
AGGACCTGGATGCCTGGCTGTCAACGTGGCCGCATGTACACGGGCAATAT
CGATCCCTTATCACAAG back to top
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