EWM25071.1, cds5608 (CDS) Nannochloropsis gaditana

Overview
NameEWM25071.1
Unique Namecds5608
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:430620..430714 -
Alignment locationCM002466.1:430455..430517 -
Alignment locationCM002466.1:429410..430340 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25071.1
Producttranslation initiation factor eif-2b subunit beta
Orig transcript idgnl|cribi|Naga_100098g19.5265.mrna
GeneEIF2Bbeta
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:430620..430714 -
CM002466.1supercontigCM002466.1:430455..430517 -
CM002466.1supercontigCM002466.1:429410..430340 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR000649IF-2B-related
Homology
BLAST of EWM25071.1 vs. NCBI_GenBank
Match: gi|585106708|gb|EWM25071.1| (translation initiation factor eif-2b subunit beta [Nannochloropsis gaditana])

HSP 1 Score: 742.651 bits (1916), Expect = 0.000e+0
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0
Query:    1 MKSSVAPSGKDLDAWLSTWPHVHGQYRSLITSLQRRKVAGSLPCAKMTIELLKAVMGTCRWTTAAELMSVVKRVGKALVDAQPLQLVVGNVVRRILFIIREEHKNKLREVRAREGGATASLSDDGEAGNELEASVPGLRTGVMEAIGELQLELDNVYNEICELALEHIHANEVILTVGRSKTVETFLREAAERRRAFEVIVAESAPDIAGREMAKSLAAAGIETTVISDSAVYAIMARVNQVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRSPSALIEYADTQLLPEADFLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDDSSLD 362
            MKSSVAPSGKDLDAWLSTWPHVHGQYRSLITSLQRRKVAGSLPCAKMTIELLKAVMGTCRWTTAAELMSVVKRVGKALVDAQPLQLVVGNVVRRILFIIREEHKNKLREVRAREGGATASLSDDGEAGNELEASVPGLRTGVMEAIGELQLELDNVYNEICELALEHIHANEVILTVGRSKTVETFLREAAERRRAFEVIVAESAPDIAGREMAKSLAAAGIETTVISDSAVYAIMARVNQVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRSPSALIEYADTQLLPEADFLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDDSSLD
Sbjct:    1 MKSSVAPSGKDLDAWLSTWPHVHGQYRSLITSLQRRKVAGSLPCAKMTIELLKAVMGTCRWTTAAELMSVVKRVGKALVDAQPLQLVVGNVVRRILFIIREEHKNKLREVRAREGGATASLSDDGEAGNELEASVPGLRTGVMEAIGELQLELDNVYNEICELALEHIHANEVILTVGRSKTVETFLREAAERRRAFEVIVAESAPDIAGREMAKSLAAAGIETTVISDSAVYAIMARVNQVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRSPSALIEYADTQLLPEADFLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDDSSLD 362          
BLAST of EWM25071.1 vs. NCBI_GenBank
Match: gi|1173939486|gb|OQR89235.1| (translation initiation factor eIF-2B beta subunit [Thraustotheca clavata])

HSP 1 Score: 332.028 bits (850), Expect = 5.368e-109
Identity = 174/352 (49.43%), Postives = 240/352 (68.18%), Query Frame = 0
Query:   12 LDAWLSTWPHVHGQYRSLITSLQRRKVAGSLPCAKMTIELLKAVMGTCRWTTAAELMSVVKRVGKALVDAQPLQLVVGNVVRRILFIIREEHKNKLREVRAREGGATASLSDDGEAGNELEASVP--GLRTGVMEAIGELQLELDNVYNEICELALEHIHANEVILTVGRSKTVETFLREAAERRRAFEVIVAESAPDIAGREMAKSLAAAGIETTVISDSAVYAIMARVNQVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRSPSALIEYADTQLLPEADFLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDDSSL 361
            L  WL+ WP +  QY+ L+  L+RR++ GS   ++ T ELL+AV+G  RW  A +LM  V+ +G+ LV A P +L +GNV+RR+LFIIREE+ N ++ + ++  G   +L      G E + + P   L+  +ME + EL  E++N++  I + A+E+IHANEVILT G S +VE FL+ AA++R+ F+VIV ES P + G+ MA  LA +GI+TTVI+DSAVYA+MARVN+V++P  A++ANGGLIA  G    ALAAK+  VPVV V GLFKL P+Y HD D  N+L SP+ ++ Y +T  LP  D LNPA DYVPPE V ++ITNTG +Q  Y+YRLL EYY   D  L
Sbjct:    7 LQQWLAPWPKIVEQYKQLVVGLKRRQITGSYETSRKTTELLRAVLGAVRWAHARQLMENVRMLGRVLVKAMPQELAIGNVIRRVLFIIREEYLNGMKALSSQPQGQL-TLGTILTPGTEADFTTPIKELKQTIMEGVSELMDEIENLHISIADQAMEYIHANEVILTFGLSTSVEEFLKAAAKKRQ-FKVIVVESTPLLNGQNMAHRLAESGIDTTVITDSAVYAMMARVNKVVIPAVAVVANGGLIAQSGIQNIALAAKKFCVPVVSVAGLFKLCPLYPHDVDVLNELVSPAHILNYDET--LPNMDVLNPANDYVPPEFVTIFITNTGAYQPSYIYRLLTEYYSPQDYQL 354          
BLAST of EWM25071.1 vs. NCBI_GenBank
Match: gi|813117111|ref|XP_012195539.1| (hypothetical protein SPRG_01783 [Saprolegnia parasitica CBS 223.65] >gi|641540108|gb|KDO33903.1| hypothetical protein SPRG_01783 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 331.257 bits (848), Expect = 1.020e-108
Identity = 169/352 (48.01%), Postives = 238/352 (67.61%), Query Frame = 0
Query:   12 LDAWLSTWPHVHGQYRSLITSLQRRKVAGSLPCAKMTIELLKAVMGTCRWTTAAELMSVVKRVGKALVDAQPLQLVVGNVVRRILFIIREEHKNKLREVRAREGGATASLSDDGEAGNELEASVP--GLRTGVMEAIGELQLELDNVYNEICELALEHIHANEVILTVGRSKTVETFLREAAERRRAFEVIVAESAPDIAGREMAKSLAAAGIETTVISDSAVYAIMARVNQVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRSPSALIEYADTQLLPEADFLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDDSSL 361
            L  WL+ WP +  Q   L+  L+RR++ GS   ++ T ELL+AV+G  R+T A +LM  ++ +G+ L+ A P +L +GNV+RR+LFI+REE+ N ++ + + +  A  SL      G E + + P   L+  +ME + EL  E++N++  I + A+E+IHANEVILT G S +VE FL+ AA++R+ F+VIV ES P + G+ MA  LA +GI+TTVI+DSAV+A+MARVN+V++P  A++ANGGLIA  G    ALAAK+  VPVV V GLFKL P+Y HD D  N+L SP+ ++ Y +T  LP  D LNP  DYVPPE V ++ITNTG +Q  Y+YRLL EYY   D  L
Sbjct:    7 LQQWLAPWPKIQDQLNLLLVGLKRRQITGSYETSRKTTELLRAVLGAVRFTHARQLMEHIRILGRVLIKAIPQELAIGNVIRRVLFIVREEYLNGMKALSS-QTQAQLSLGTILTPGMEDDFTTPIKELKQAIMEGVSELMDEIENLHISIADQAMEYIHANEVILTYGLSTSVEEFLKAAAKKRQ-FKVIVVESTPVLNGQNMAHRLAESGIDTTVITDSAVFAMMARVNKVVIPAIAVVANGGLIAQSGIQNIALAAKKFCVPVVSVAGLFKLCPLYPHDLDVLNELVSPAHILNYDET--LPNMDVLNPVNDYVPPEHVTIFITNTGAYQPSYIYRLLTEYYSPQDYQL 354          
BLAST of EWM25071.1 vs. NCBI_GenBank
Match: gi|669142708|ref|XP_008606916.1| (hypothetical protein SDRG_03075 [Saprolegnia diclina VS20] >gi|530741402|gb|EQC39644.1| hypothetical protein SDRG_03075 [Saprolegnia diclina VS20])

HSP 1 Score: 332.028 bits (850), Expect = 1.126e-108
Identity = 169/352 (48.01%), Postives = 238/352 (67.61%), Query Frame = 0
Query:   12 LDAWLSTWPHVHGQYRSLITSLQRRKVAGSLPCAKMTIELLKAVMGTCRWTTAAELMSVVKRVGKALVDAQPLQLVVGNVVRRILFIIREEHKNKLREVRAREGGATASLSDDGEAGNELEASVP--GLRTGVMEAIGELQLELDNVYNEICELALEHIHANEVILTVGRSKTVETFLREAAERRRAFEVIVAESAPDIAGREMAKSLAAAGIETTVISDSAVYAIMARVNQVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRSPSALIEYADTQLLPEADFLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDDSSL 361
            L  WL+ WP +  Q   L+  L+RR++ GS   ++ T ELL+AV+G  R+T A +LM  ++ +G+ L+ A P +L +GNV+RR+LFI+REE+ N ++ + + +  A  SL      G E + + P   L+  +ME + EL  E++N++  I + A+E+IHANEVILT G S +VE FL+ AA++R+ F+VIV ES P + G+ MA  LA +GI+TTVI+DSAV+A+MARVN+V++P  A++ANGGLIA  G    ALAAK+  VPVV V GLFKL P+Y HD D  N+L SP+ ++ Y +T  LP  D LNP  DYVPPE V ++ITNTG +Q  Y+YRLL EYY   D  L
Sbjct:   28 LQQWLAPWPKIQDQLNLLLVGLKRRQITGSYETSRKTTELLRAVLGAVRFTHARQLMEHIRILGRVLIKAIPQELAIGNVIRRVLFIVREEYLNGMKTLSS-QTQAQLSLGTILTPGMEDDFTTPIKELKQAIMEGVSELMDEIENLHISIADQAMEYIHANEVILTYGLSTSVEEFLKAAAKKRQ-FKVIVVESTPVLNGQNMAHRLAESGIDTTVITDSAVFAMMARVNKVVIPAIAVVANGGLIAQSGIQNIALAAKKFCVPVVSVAGLFKLCPLYPHDLDVLNELVSPAHILNYDET--LPNMDVLNPVNDYVPPEHVTIFITNTGAYQPSYIYRLLTEYYSPQDYQL 375          
BLAST of EWM25071.1 vs. NCBI_GenBank
Match: gi|675185783|ref|XP_008901776.1| (hypothetical protein PPTG_08802 [Phytophthora parasitica INRA-310] >gi|566029431|gb|ETI52342.1| hypothetical protein F443_04482 [Phytophthora parasitica P1569] >gi|567967046|gb|ETK92232.1| hypothetical protein L915_04354 [Phytophthora parasitica] >gi|567995478|gb|ETL45613.1| hypothetical protein L916_04320 [Phytophthora parasitica] >gi|568024757|gb|ETL98784.1| hypothetical protein L917_04200 [Phytophthora parasitica] >gi|568055196|gb|ETM51949.1| hypothetical protein L914_04302 [Phytophthora parasitica] >gi|568097998|gb|ETN12733.1| hypothetical protein PPTG_08802 [Phytophthora parasitica INRA-310] >gi|570957184|gb|ETP22163.1| hypothetical protein F441_04454 [Phytophthora parasitica CJ01A1] >gi|570992571|gb|ETP50048.1| hypothetical protein F442_04516 [Phytophthora parasitica P10297] >gi|970639739|gb|KUF82611.1| Translation initiation factor eIF-2B subunit beta [Phytophthora nicotianae] >gi|970643990|gb|KUF85025.1| hypothetical protein AM588_10000807 [Phytophthora nicotianae] >gi|970660300|gb|KUF97861.1| Translation initiation factor eIF-2B subunit beta [Phytophthora nicotianae])

HSP 1 Score: 324.709 bits (831), Expect = 4.670e-106
Identity = 177/364 (48.63%), Postives = 240/364 (65.93%), Query Frame = 0
Query:    6 APSGKDLDAWLSTWPHVHGQYRSLITSLQRRKVAGSLPCAKMTIELLKAVMGTCRWTTAAELMSVVKRVGKALVDAQPLQLVVGNVVRRILFIIREEHKNKLR------EVRAREGGATASLSDDGEAGNELEASVP--GLRTGVMEAIGELQLELDNVYNEICELALEHIHANEVILTVGRSKTVETFLREAAERRRAFEVIVAESAPDIAGREMAKSLAAAGIETTVISDSAVYAIMARVNQVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRSPSALIEYADTQLLPEADFLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDDSSL 361
            AP+ K+L  WL  WP V      L+ SL+RR++ GS   AKMT  +L  V+ T  W+TA E++  ++++G  L  A   +L +GNVVRR+L+IIREEH N L+       V  R    + SL      G + + S+P   L+  VME I EL  E+D+++  I + A+E+IH +EVILT G+S +VE FL+ AA ++R+F+VIV ESAP + G+ MA +LA +GI  TVI DSAV+A+MARVN+V++P  A++ANGGLIA  G    ALAAK+ SVPVVCV GL KLSP+Y HD D  ++L +PS++  Y DT  +   + LNPAYDYVPPE V ++ITNTG HQ  Y+YRLL EYY   D  L
Sbjct:    3 APT-KELKEWLDEWPAVRELVDELVLSLKRRQLRGSYETAKMTTSVLSKVLETVEWSTAGEILEKIRQLGHMLTKAHAHELAIGNVVRRVLYIIREEHSNALKLSSAAAPVSGRNNNLSRSLGTILTPGTDTDLSIPITDLKLSVMEGIAELVDEIDSLHVNIADQAMEYIHTDEVILTFGQSLSVEAFLKTAA-KKRSFQVIVVESAPSLNGQHMAHALAESGIHVTVIPDSAVFALMARVNKVVVPAAAVVANGGLIAQSGLQNIALAAKKCSVPVVCVAGLIKLSPLYAHDLDVLSELLAPSSIYNYEDT--VDNLEVLNPAYDYVPPECVRIFITNTGAHQPSYIYRLLAEYYSPQDYQL 362          
BLAST of EWM25071.1 vs. NCBI_GenBank
Match: gi|570333169|gb|ETO81117.1| (hypothetical protein F444_04510 [Phytophthora parasitica P1976])

HSP 1 Score: 324.709 bits (831), Expect = 5.379e-106
Identity = 175/360 (48.61%), Postives = 237/360 (65.83%), Query Frame = 0
Query:   10 KDLDAWLSTWPHVHGQYRSLITSLQRRKVAGSLPCAKMTIELLKAVMGTCRWTTAAELMSVVKRVGKALVDAQPLQLVVGNVVRRILFIIREEHKNKLR------EVRAREGGATASLSDDGEAGNELEASVP--GLRTGVMEAIGELQLELDNVYNEICELALEHIHANEVILTVGRSKTVETFLREAAERRRAFEVIVAESAPDIAGREMAKSLAAAGIETTVISDSAVYAIMARVNQVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRSPSALIEYADTQLLPEADFLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDDSSL 361
            K+L  WL  WP V      L+ SL+RR++ GS   AKMT  +L  V+ T  W+TA E++  ++++G  L  A   +L +GNVVRR+L+IIREEH N L+       V  R    + SL      G + + S+P   L+  VME I EL  E+D+++  I + A+E+IH +EVILT G+S +VE FL+ AA ++R+F+VIV ESAP + G+ MA +LA +GI  TVI DSAV+A+MARVN+V++P  A++ANGGLIA  G    ALAAK+ SVPVVCV GL KLSP+Y HD D  ++L +PS++  Y DT  +   + LNPAYDYVPPE V ++ITNTG HQ  Y+YRLL EYY   D  L
Sbjct:    6 KELKEWLDEWPAVRELVDELVLSLKRRQLRGSYETAKMTTSVLSKVLETVEWSTAGEILEKIRQLGHMLTKAHAHELAIGNVVRRVLYIIREEHSNALKLSSAAAPVSGRNNNLSRSLGTILTPGTDTDLSIPITDLKLSVMEGIAELVDEIDSLHVNIADQAMEYIHTDEVILTFGQSLSVEAFLKTAA-KKRSFQVIVVESAPSLNGQHMAHALAESGIHVTVIPDSAVFALMARVNKVVVPAAAVVANGGLIAQSGLQNIALAAKKCSVPVVCVAGLIKLSPLYAHDLDVLSELLAPSSIYNYEDT--VDNLEVLNPAYDYVPPECVRIFITNTGAHQPSYIYRLLAEYYSPQDYQL 362          
BLAST of EWM25071.1 vs. NCBI_GenBank
Match: gi|698804354|ref|XP_009835206.1| (hypothetical protein H257_10377 [Aphanomyces astaci] >gi|574109656|gb|ETV75158.1| hypothetical protein H257_10377 [Aphanomyces astaci])

HSP 1 Score: 323.939 bits (829), Expect = 7.873e-106
Identity = 171/352 (48.58%), Postives = 238/352 (67.61%), Query Frame = 0
Query:   12 LDAWLSTWPHVHGQYRSLITSLQRRKVAGSLPCAKMTIELLKAVMGTCRWTTAAELMSVVKRVGKALVDAQPLQLVVGNVVRRILFIIREEHKNKLREVRAREGGATASLSDDGEAGNELEASVP--GLRTGVMEAIGELQLELDNVYNEICELALEHIHANEVILTVGRSKTVETFLREAAERRRAFEVIVAESAPDIAGREMAKSLAAAGIETTVISDSAVYAIMARVNQVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRSPSALIEYADTQLLPEADFLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDDSSL 361
            L  WL+ WP +  Q  +L+  L+RR++ GS   ++ T ELL++++GT RWT A +LM  ++ +G+ LV A P +L +GNV+RR+LFIIREE+ N ++ + + +  +  SL      G E + + P   L+  VME + EL  E++N++  I E A+E+IHANEVILT G S +VE FL+ AA++R+ F+VIV ESAP + G+  A  LA +GI+TT+I DSAV+A+MARVN+V++P  A++ANGGLIA  G    ALAAK+  VPVVCV GLFKL P++ HD D  N+L SP+ +  Y DT  L   D LNP  DYVPPE V ++ITNTG +Q  Y+YRLL EYY   D  L
Sbjct:    6 LKQWLAPWPKISAQLSNLLVGLKRRQITGSYETSRKTTELLRSILGTVRWTHARQLMDNIRLLGRVLVKAIPQELAIGNVIRRVLFIIREEYLNAVKTLSS-QTQSQLSLGTILTPGTEADYTTPIKELKQSVMEGVSELMDEIENLHVSIAEQAMEYIHANEVILTYGMSTSVEEFLKAAAKKRQ-FKVIVVESAPLLHGQASAHRLAESGIDTTLIPDSAVFALMARVNKVVIPAVAVVANGGLIAESGIQNIALAAKKFCVPVVCVAGLFKLCPLFPHDVDVLNELVSPAHIFNYDDT--LHNIDVLNPVNDYVPPEFVTIFITNTGAYQPSYIYRLLTEYYSPQDYQL 353          
BLAST of EWM25071.1 vs. NCBI_GenBank
Match: gi|673035490|ref|XP_008871706.1| (hypothetical protein H310_07955 [Aphanomyces invadans] >gi|574472926|gb|ETV99930.1| hypothetical protein H310_07955 [Aphanomyces invadans])

HSP 1 Score: 320.087 bits (819), Expect = 1.970e-104
Identity = 169/352 (48.01%), Postives = 238/352 (67.61%), Query Frame = 0
Query:   12 LDAWLSTWPHVHGQYRSLITSLQRRKVAGSLPCAKMTIELLKAVMGTCRWTTAAELMSVVKRVGKALVDAQPLQLVVGNVVRRILFIIREEHKNKLREVRAREGGATASLSDDGEAGNELEASVP--GLRTGVMEAIGELQLELDNVYNEICELALEHIHANEVILTVGRSKTVETFLREAAERRRAFEVIVAESAPDIAGREMAKSLAAAGIETTVISDSAVYAIMARVNQVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRSPSALIEYADTQLLPEADFLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDDSSL 361
            L  WL+ WP +  Q  +L+  L+RR++ GS   ++ T EL++A++GT RWT A +LM  ++ +G+ L+ A P +L +GNV+RR+LFIIREE+ N ++ + + +  +  SL      G E + + P   L+  +ME + EL  E++N++  I E A+E+IHANEVILT G S +VE FL+ AA++R+ F+VIV ESAP + G+  A  LA +GI+TT+I DSAV+A+MARVN+V++P  A++ANGGLIA  G    ALAAK+  VPVVCV GLFKL P++ HD D  N+L SP+ +  Y DT  L   D LNP  DYVPPE V ++ITNTG +Q  Y+YRLL EYY   D  L
Sbjct:    6 LKQWLAPWPKISTQLSNLLVGLKRRQITGSYETSRKTTELVRAILGTVRWTHARQLMDNIRLLGRVLIKAIPQELAIGNVIRRVLFIIREEYLNAMKTLSS-QTLSQPSLGTILTPGTEADYTTPIKELKQSIMEGVSELVDEIENLHVSIAEQAMEYIHANEVILTYGMSTSVEEFLKAAAKKRQ-FKVIVVESAPLLHGQGSAHRLAESGIDTTLIPDSAVFALMARVNKVVIPAVAVVANGGLIAESGIQNIALAAKKFCVPVVCVAGLFKLCPLFPHDVDMLNELVSPAHIYNYDDT--LHNIDVLNPVNDYVPPEFVTIFITNTGAYQPSYIYRLLTEYYSPQDYQL 353          
BLAST of EWM25071.1 vs. NCBI_GenBank
Match: gi|1173946607|gb|OQR95120.1| (translation initiation factor eIF-2B beta subunit [Achlya hypogyna])

HSP 1 Score: 319.316 bits (817), Expect = 3.743e-104
Identity = 167/354 (47.18%), Postives = 239/354 (67.51%), Query Frame = 0
Query:   10 KDLDAWLSTWPHVHGQYRSLITSLQRRKVAGSLPCAKMTIELLKAVMGTCRWTTAAELMSVVKRVGKALVDAQPLQLVVGNVVRRILFIIREEHKNKLREVRAREGGATASLSDDGEAGNELEASVP--GLRTGVMEAIGELQLELDNVYNEICELALEHIHANEVILTVGRSKTVETFLREAAERRRAFEVIVAESAPDIAGREMAKSLAAAGIETTVISDSAVYAIMARVNQVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRSPSALIEYADTQLLPEADFLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDDSSL 361
            +++  WL  WP +  Q+  L+  L+RR++ GS   ++ T ELL+AV+G  R+T A +LM  ++ +G+ L+ A P +L +GNV+RR+LFI+REE+ N ++ + + +  A  SL      G E + + P   L+  +ME + EL  E++N++  I + A+E+IHANEVILT G S +VE FL+ AA++R+ F+VIV ES P + G+ MA  L  +GI+TTVI+DSAV+A+MARVN+V++P  A++ANGGLIA  G    ALAAK+  VPVV V GLFKL P+Y HD D  N+L SP+ ++ Y +T  LP  D LNP  DYVPPE V ++ITNTG +Q  Y+YRLL EYY   D  L
Sbjct:    2 EEVQEWLKPWPKILDQFNQLVVGLKRRQITGSYETSRKTTELLRAVLGAVRFTHARQLMEHIRLLGRVLIKAIPQELAIGNVIRRVLFIVREEYLNGMKALSS-QTQAQLSLGTILTPGMEDDFTTPIKELKQAIMEGVSELMDEIENLHISIADQAMEYIHANEVILTYGLSTSVEEFLKAAAKKRQ-FKVIVVESTPLLNGQTMAHRLVESGIDTTVITDSAVFAMMARVNKVVIPAVAVVANGGLIAQSGIQNIALAAKKFCVPVVSVAGLFKLCPLYPHDLDVLNELVSPAHILNYDET--LPNMDVLNPVNDYVPPEFVTIFITNTGAYQPSYIYRLLTEYYSPQDYQL 351          
BLAST of EWM25071.1 vs. NCBI_GenBank
Match: gi|695400765|ref|XP_009522595.1| (hypothetical protein PHYSODRAFT_312818 [Phytophthora sojae] >gi|348680062|gb|EGZ19878.1| hypothetical protein PHYSODRAFT_312818 [Phytophthora sojae])

HSP 1 Score: 317.775 bits (813), Expect = 2.973e-103
Identity = 178/373 (47.72%), Postives = 243/373 (65.15%), Query Frame = 0
Query:    6 APSGKDLDAWLSTWPHVHGQYRSLITSLQRRKVAGSLPCAKMTIELLKAVMGTCRWTTAAELMSVVKRVGKALVDAQPLQLVVGNVVRRILFIIREEHKNKLREVRAREGGATA---------------SLSDDGEAGNELEASVP--GLRTGVMEAIGELQLELDNVYNEICELALEHIHANEVILTVGRSKTVETFLREAAERRRAFEVIVAESAPDIAGREMAKSLAAAGIETTVISDSAVYAIMARVNQVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVYRHDQDAFNDLRSPSALIEYADTQLLPEADFLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDDSSL 361
            AP+ K+L  WL  WP V      L+ SL+RR++ GS   AKMT  +L  V+ T  W+TA E++  ++++G  L  A   +L +GNVVRR+L+IIREEH N L+ + + +GGA A               SL      G + + S+P   L+  VME I EL  E+D+++  I + A+E+IH++EVILT G S +VE FL+ AA++R+ F+VIV ESAP + G+  A +LA +GI  TVI DSAV+A+MARVN+V++P  A++ANGGLIA  G    ALAAK+ SVPVVCV GL KLSP+Y HD D  ++L +PS++  Y DT  +   + LNPAYDYVPPE V ++ITNTG HQ  Y+YRLL EYY   D  L
Sbjct:    3 APT-KELKEWLDEWPVVRDLVDELLLSLKRRQLRGSYETAKMTTSVLSKVLETVEWSTAGEILEKIRQLGHMLTKAHAHELAIGNVVRRVLYIIREEHSNALK-LSSADGGAAAQVPAPPSSRNNNLSRSLGTILTPGTDTDLSIPIADLKLSVMEGIAELVDEIDSLHVNIADQAMEYIHSDEVILTFGMSLSVEAFLKTAAKKRQ-FKVIVVESAPSLNGQRTAHALAESGIHVTVIPDSAVFALMARVNKVVVPAAAVVANGGLIAQSGLQNIALAAKKCSVPVVCVAGLIKLSPLYAHDLDVLSELMAPSSIYNYEDT--VDNLEVLNPAYDYVPPECVRIFITNTGAHQPSYIYRLLAEYYSPQDYQL 370          
The following BLAST results are available for this feature:
BLAST of EWM25071.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106708|gb|EWM25071.1|0.000e+0100.00translation initiation factor eif-2b subunit beta ... [more]
gi|1173939486|gb|OQR89235.1|5.368e-10949.43translation initiation factor eIF-2B beta subunit ... [more]
gi|813117111|ref|XP_012195539.1|1.020e-10848.01hypothetical protein SPRG_01783 [Saprolegnia paras... [more]
gi|669142708|ref|XP_008606916.1|1.126e-10848.01hypothetical protein SDRG_03075 [Saprolegnia dicli... [more]
gi|675185783|ref|XP_008901776.1|4.670e-10648.63hypothetical protein PPTG_08802 [Phytophthora para... [more]
gi|570333169|gb|ETO81117.1|5.379e-10648.61hypothetical protein F444_04510 [Phytophthora para... [more]
gi|698804354|ref|XP_009835206.1|7.873e-10648.58hypothetical protein H257_10377 [Aphanomyces astac... [more]
gi|673035490|ref|XP_008871706.1|1.970e-10448.01hypothetical protein H310_07955 [Aphanomyces invad... [more]
gi|1173946607|gb|OQR95120.1|3.743e-10447.18translation initiation factor eIF-2B beta subunit ... [more]
gi|695400765|ref|XP_009522595.1|2.973e-10347.72hypothetical protein PHYSODRAFT_312818 [Phytophtho... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5622rna5622Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications