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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100016g6.2902.mrna |
| Orig protein id | gnl|cribi|Naga_100016g6.2902 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:374303..375888 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5598 ID=rna5598|Name=rna5598|organism=Nannochloropsis gaditana|type=mRNA|length=1125bp
AGGGCGTGTGCTCTTCGGCGTTCTTTTCCCTTCGCAGTCGTTTGAGGCCG
GACCCTTTTTAAGCCCCCTTACGCCGTCTGGCTTCATTCCCGCCCTCGCC
CACACCTCGTCTCACAAATTTCACGCCCCCCACCGCAATTGACGCGCTAG
TACATACCTACCCCGGCATAGACCAAAACTTTGCTTAAAGCAACTTGGAA
TCTTACTTTCTTTTTGTCTCCAGACAGGGACCTTCTCGGCTGTTGCTATT
CGTCATCATGGAGAACGCCAGTGCCCAAACCCCCACTGCCAGGATGAAGC
ATTTGCGAACATTGTTTGTGGACAAATACCTGGAAAGTTCCACGAAGCAC
CTCTGTACTACTGACATACCGGAAGCGTTTGCAGATTTGAAAAGCCAGTT
GGACGGGCCCTCTTTCAACATCTTGATGACAATGGTGAAAGAAAAAATGC
AAGCTTTAGGACCTTTTGCTCAAAAGGAATTTCAAGAACTATGCACCGAG
CTAGGTCTGGAAGATAAATTTCGTCAAGTGGAGGCACAGATATCGGAGGC
GGCAACTCATCGCGAAGCGGCCAGTCGCACGAAGGGGAGGAGAAACGCAC
GTACTGGGAAAGAGGGAATGAAGTCGACGGACCCCCAGGAGCAATTTGGA
AACGAGAACTGCAATGACAGTGTGGCGGACGACATGCCTCCTGAAGATTC
AGCGCGGCATCGGCGAATGGTCATTAAGCGCAAGGAGCTGGCCGAGCTGC
GGGGCATGCAGGAGAGGGAGGTCACTCTCTTACGCGATGCGGAGGAAAGC
TTGAAGGCCACCAAGGACAAGATGCGGGCGGTCTATCATGACATGAGCTC
GTTGGCTCCTGAGGCACAAAGACTCCTGCAGCGTTGTACCGAAAATTAAA
TATTTGTTGTTATCAAATTCAGTGGGAGCGAGTGTAGGAAACGGTCTATC
GTGTGGAGCAAGCCTGTGTAATATTTCTCGCACAAAAATACGGAAGCGAG
CAATGAAAGGCCAGACCTGCGTATGAGAGGATGGAGGGATAGAAAGTACT
GTACCGGACTTTCTGATGTGTATACACAAAGATATCGACTTGCGTCAAAC
AAACAATCGTTTCACAAATGGCGAG back to topprotein sequence of rna5598 >rna5598-protein ID=rna5598-protein|Name=rna5598|organism=Nannochloropsis gaditana|type=polypeptide|length=365bp
MQAHPLKERGLEFALRKTTVQEFFRDFISDKAVLGIDKYHEWQGDKDVEV
SPWQEVNQGVGATRVVRFVSSLEGLPVGPPTALVMQLQRVRVFGQHGMVL
ETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAGALSIETSFEVRF
VKSTLFKKIIESRSRADTLEYHRRWFEMIEKHVARRHHERSRTREQARRS
SHPLRRTVENNAGRGEKTVGPPPCQTDQMGSFRPRSPCLHPRLLSPPPCA
QYDAPGVPTVCASNGAANGRTVSPDCGAMAGHSFGADCLAGRVARDATGD
PRPDLKVRARGSLRLVDLTSDSHATCVRYHGAARRVMRNVEAFSVFSPCS
LEGGTCNDEVYIGTN back to topmRNA from alignment at CM002466.1:374303..375888- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5598 ID=rna5598|Name=rna5598|organism=Nannochloropsis gaditana|type=mRNA|length=1586bp|location=Sequence derived from alignment at CM002466.1:374303..375888- (Nannochloropsis gaditana)
ATGCAAGCCCATCCGCTCAAGGAGAGGGGCCTCGAGTTCGCACTCCGGAA
AACTACAGTACAAGAGTTCTTCCGGGACTTCATCTCCGACAAAGCTGTCC
TGGGAATCGACAAGTACCACGGTAAGGGGTTGTGGATCTGGTCACGTGAG
TGGCCTCTGCCAGTTATGTGTCTTGATGACTGGCTGCAAAGAGAGCCACA
GGAGCGAGTAAACGTTCCCTCTTGCGTCACGCCTGATGCATTCTCGTTTT
TCCTTGGAAACAGAATGGCAGGGCGACAAGGATGTGGAGGTGTCGCCCTG
GCAAGAGGTCAACCAGGGAGTGGGCGCCACCCGGGTGGTTCGCTTTGTCT
CGAGCCTGGAGGTAGGTGGGGGCTCGCACGCGTGGGCGTGGGGAAGTCTT
TTTGCTTCAGGGCACCATAAGCAAAGGGTGTAGCGCCTGTGGGGTCGCAC
CACCATATCTAAATCTCTCATCTCAGTAAAAGCTTTCCTAGCGAGAGATT
GGGCATGGTTATGGCGACATAAGGGCTCGTCGTCCACACGGTCGATCGCC
GCTCAAGCCCGCCGACTCATGACCCTTGTCTCTCACAGGGACTTCCCGTC
GGGCCGCCCACGGCTCTAGTCATGCAATTACAGCGTGTGCGGGTCTTCGG
TCAACATGGGATGGTCCTGGAGACATCTTCCTCCATGGAGAACGTGCCCG
CGGGAGATTGCTTTACGCTGGAAGATCGCTGGGTGGTCCGACCCCTGCCC
GCCTCTGAGGCCCCGACGAGGACAGAAGCCGGCGCCCTGTCCATCGAGAC
GTCCTTCGAGGTCAGGTTTGTGAAAAGCACATTGTTCAAGAAGATAATCG
AAAGTCGGTCTCGGGCGGATACTCTGGAGTATCACCGCCGCTGGTTCGAG
ATGATTGAAAAGCATGTGGCACGTCGACACCACGAGCGATCCCGCACGCG
TGAACAGGCGCGTCGTTCCTCACACCCACTACGACGGACCGTGGAAAACA
ATGCAGGGAGGGGAGAAAAGACTGGTGTGTATAAGGAGGGTAAAGGCGGG
AGGACGGGACAGGGGCCTGGCGGTGCTCTGCAGAAAACGGGTGTGGGGCG
GGGGGAGGGTGCTTTGCTTCCGCCACAGTCTGCGAGATTGCAGTCGGCCC
TCCACCTTGTCAAACGGATCAAATGGGATCGTTTCGTCCTCGCAGTCCTT
GTCTTCACCCTCGTCTTCTATCTCCTCCGCCTTGTGCTCAATACGATGCT
CCCGGTGTCCCTACGGTTTGCGCCTCAAATGGGGCGGCAAATGGACGTAC
CGTCTCCCCTGACTGTGGAGCAATGGCGGGACATTCTTTCGGAGCTGACT
GCCTTGCGGGCCGAGTTGCAAGAGATGCGACTGGAGATCCGCGCCCTGAT
CTCAAAGTCAGGGCCCGAGGGTCGTTGAGGCTCGTGGACTTAACAAGTGA
CAGCCACGCGACCTGCGTAAGATACCATGGGGCTGCCCGGAGAGTAATGA
GAAATGTTGAGGCATTTTCTGTATTCTCTCCTTGTTCACTGGAGGGAGGG
ACGTGTAATGATGAGGTGTACATTGGGACAAATTGA back to topCoding sequence (CDS) from alignment at CM002466.1:374303..375888- >rna5598 ID=rna5598|Name=rna5598|organism=Nannochloropsis gaditana|type=CDS|length=4392bp|location=Sequence derived from alignment at CM002466.1:374303..375888- (Nannochloropsis gaditana)
TCGGCCCTCCACCTTGTCAAACGGATCAAATGGGATCGTTTCGTCCTCGC
AGTCCTTGTCTTCACCCTCGTCTTCTATCTCCTCCGCCTTGTGCTCAATA
CGATGCTCCCGGTGTCCCTACGGTTTGCGCCTCAAATGGGGCGGCAAATG
GACGTACCGTCTCCCCTGACTGTGGAGCAATGGCGGGACATTCTTTCGGA
GCTGACTGCCTTGCGGGCCGAGTTGCAAGAGATGCGACTGGAGATCCGCG
CCCTGATCTCAAAGTCAGGGCCCGAGGGTCGTTGAGGCTCGTGGACTTAA
CAAGTGACAGCCACGCGACCTGCGTAAGATACCATGGGGCTGCCCGGAGA
GTAATGAGAAATGTTGAGGCATTTTCTGTATTCTCTCCTTGTTCACTGGA
GGGAGGGACGTGTAATGATGAGGTGTACATTGGGACAAATTGAGGACTTC
CCGTCGGGCCGCCCACGGCTCTAGTCATGCAATTACAGCGTGTGCGGGTC
TTCGGTCAACATGGGATGGTCCTGGAGACATCTTCCTCCATGGAGAACGT
GCCCGCGGGAGATTGCTTTACGCTGGAAGATCGCTGGGTGGTCCGACCCC
TGCCCGCCTCTGAGGCCCCGACGAGGACAGAAGCCGGCGCCCTGTCCATC
GAGACGTCCTTCGAGGTCAGGTTTGTGAAAAGCACATTGTTCAAGAAGAT
AATCGAAAGTCGGTCTCGGGCGGATACTCTGGAGTATCACCGCCGCTGGT
TCGAGATGATTGAAAAGCATGTGGCACGTCGACACCACGAGCGATCCCGC
ACGCGTGAACAGGCGCGTCGTTCCTCACACCCACTACGACGGACCGTGGA
AAACAATGCAGGGAGGGGAGAAAAGACTGAATGGCAGGGCGACAAGGATG
TGGAGGTGTCGCCCTGGCAAGAGGTCAACCAGGGAGTGGGCGCCACCCGG
GTGGTTCGCTTTGTCTCGAGCCTGGAGATGCAAGCCCATCCGCTCAAGGA
GAGGGGCCTCGAGTTCGCACTCCGGAAAACTACAGTACAAGAGTTCTTCC
GGGACTTCATCTCCGACAAAGCTGTCCTGGGAATCGACAAGTACCACGTC
GGCCCTCCACCTTGTCAAACGGATCAAATGGGATCGTTTCGTCCTCGCAG
TCCTTGTCTTCACCCTCGTCTTCTATCTCCTCCGCCTTGTGCTCAATACG
ATGCTCCCGGTGTCCCTACGGTTTGCGCCTCAAATGGGGCGGCAAATGGA
CGTACCGTCTCCCCTGACTGTGGAGCAATGGCGGGACATTCTTTCGGAGC
TGACTGCCTTGCGGGCCGAGTTGCAAGAGATGCGACTGGAGATCCGCGCC
CTGATCTCAAAGTCAGGGCCCGAGGGTCGTTGAGGCTCGTGGACTTAACA
AGTGACAGCCACGCGACCTGCGTAAGATACCATGGGGCTGCCCGGAGAGT
AATGAGAAATGTTGAGGCATTTTCTGTATTCTCTCCTTGTTCACTGGAGG
GAGGGACGTGTAATGATGAGGTGTACATTGGGACAAATTGAGGACTTCCC
GTCGGGCCGCCCACGGCTCTAGTCATGCAATTACAGCGTGTGCGGGTCTT
CGGTCAACATGGGATGGTCCTGGAGACATCTTCCTCCATGGAGAACGTGC
CCGCGGGAGATTGCTTTACGCTGGAAGATCGCTGGGTGGTCCGACCCCTG
CCCGCCTCTGAGGCCCCGACGAGGACAGAAGCCGGCGCCCTGTCCATCGA
GACGTCCTTCGAGGTCAGGTTTGTGAAAAGCACATTGTTCAAGAAGATAA
TCGAAAGTCGGTCTCGGGCGGATACTCTGGAGTATCACCGCCGCTGGTTC
GAGATGATTGAAAAGCATGTGGCACGTCGACACCACGAGCGATCCCGCAC
GCGTGAACAGGCGCGTCGTTCCTCACACCCACTACGACGGACCGTGGAAA
ACAATGCAGGGAGGGGAGAAAAGACTGAATGGCAGGGCGACAAGGATGTG
GAGGTGTCGCCCTGGCAAGAGGTCAACCAGGGAGTGGGCGCCACCCGGGT
GGTTCGCTTTGTCTCGAGCCTGGAGATGCAAGCCCATCCGCTCAAGGAGA
GGGGCCTCGAGTTCGCACTCCGGAAAACTACAGTACAAGAGTTCTTCCGG
GACTTCATCTCCGACAAAGCTGTCCTGGGAATCGACAAGTACCACGTCGG
CCCTCCACCTTGTCAAACGGATCAAATGGGATCGTTTCGTCCTCGCAGTC
CTTGTCTTCACCCTCGTCTTCTATCTCCTCCGCCTTGTGCTCAATACGAT
GCTCCCGGTGTCCCTACGGTTTGCGCCTCAAATGGGGCGGCAAATGGACG
TACCGTCTCCCCTGACTGTGGAGCAATGGCGGGACATTCTTTCGGAGCTG
ACTGCCTTGCGGGCCGAGTTGCAAGAGATGCGACTGGAGATCCGCGCCCT
GATCTCAAAGTCAGGGCCCGAGGGTCGTTGAGGCTCGTGGACTTAACAAG
TGACAGCCACGCGACCTGCGTAAGATACCATGGGGCTGCCCGGAGAGTAA
TGAGAAATGTTGAGGCATTTTCTGTATTCTCTCCTTGTTCACTGGAGGGA
GGGACGTGTAATGATGAGGTGTACATTGGGACAAATTGAGGACTTCCCGT
CGGGCCGCCCACGGCTCTAGTCATGCAATTACAGCGTGTGCGGGTCTTCG
GTCAACATGGGATGGTCCTGGAGACATCTTCCTCCATGGAGAACGTGCCC
GCGGGAGATTGCTTTACGCTGGAAGATCGCTGGGTGGTCCGACCCCTGCC
CGCCTCTGAGGCCCCGACGAGGACAGAAGCCGGCGCCCTGTCCATCGAGA
CGTCCTTCGAGGTCAGGTTTGTGAAAAGCACATTGTTCAAGAAGATAATC
GAAAGTCGGTCTCGGGCGGATACTCTGGAGTATCACCGCCGCTGGTTCGA
GATGATTGAAAAGCATGTGGCACGTCGACACCACGAGCGATCCCGCACGC
GTGAACAGGCGCGTCGTTCCTCACACCCACTACGACGGACCGTGGAAAAC
AATGCAGGGAGGGGAGAAAAGACTGAATGGCAGGGCGACAAGGATGTGGA
GGTGTCGCCCTGGCAAGAGGTCAACCAGGGAGTGGGCGCCACCCGGGTGG
TTCGCTTTGTCTCGAGCCTGGAGATGCAAGCCCATCCGCTCAAGGAGAGG
GGCCTCGAGTTCGCACTCCGGAAAACTACAGTACAAGAGTTCTTCCGGGA
CTTCATCTCCGACAAAGCTGTCCTGGGAATCGACAAGTACCACGTCGGCC
CTCCACCTTGTCAAACGGATCAAATGGGATCGTTTCGTCCTCGCAGTCCT
TGTCTTCACCCTCGTCTTCTATCTCCTCCGCCTTGTGCTCAATACGATGC
TCCCGGTGTCCCTACGGTTTGCGCCTCAAATGGGGCGGCAAATGGACGTA
CCGTCTCCCCTGACTGTGGAGCAATGGCGGGACATTCTTTCGGAGCTGAC
TGCCTTGCGGGCCGAGTTGCAAGAGATGCGACTGGAGATCCGCGCCCTGA
TCTCAAAGTCAGGGCCCGAGGGTCGTTGAGGCTCGTGGACTTAACAAGTG
ACAGCCACGCGACCTGCGTAAGATACCATGGGGCTGCCCGGAGAGTAATG
AGAAATGTTGAGGCATTTTCTGTATTCTCTCCTTGTTCACTGGAGGGAGG
GACGTGTAATGATGAGGTGTACATTGGGACAAATTGAGGACTTCCCGTCG
GGCCGCCCACGGCTCTAGTCATGCAATTACAGCGTGTGCGGGTCTTCGGT
CAACATGGGATGGTCCTGGAGACATCTTCCTCCATGGAGAACGTGCCCGC
GGGAGATTGCTTTACGCTGGAAGATCGCTGGGTGGTCCGACCCCTGCCCG
CCTCTGAGGCCCCGACGAGGACAGAAGCCGGCGCCCTGTCCATCGAGACG
TCCTTCGAGGTCAGGTTTGTGAAAAGCACATTGTTCAAGAAGATAATCGA
AAGTCGGTCTCGGGCGGATACTCTGGAGTATCACCGCCGCTGGTTCGAGA
TGATTGAAAAGCATGTGGCACGTCGACACCACGAGCGATCCCGCACGCGT
GAACAGGCGCGTCGTTCCTCACACCCACTACGACGGACCGTGGAAAACAA
TGCAGGGAGGGGAGAAAAGACTGAATGGCAGGGCGACAAGGATGTGGAGG
TGTCGCCCTGGCAAGAGGTCAACCAGGGAGTGGGCGCCACCCGGGTGGTT
CGCTTTGTCTCGAGCCTGGAGATGCAAGCCCATCCGCTCAAGGAGAGGGG
CCTCGAGTTCGCACTCCGGAAAACTACAGTACAAGAGTTCTTCCGGGACT
TCATCTCCGACAAAGCTGTCCTGGGAATCGACAAGTACCACG back to top
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