EWM25093.1, cds5584 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25093.1 vs. NCBI_GenBank
Match: gi|585106731|gb|EWM25093.1| (hypothetical protein Naga_100016g6 [Nannochloropsis gaditana]) HSP 1 Score: 753.821 bits (1945), Expect = 0.000e+0 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0
Query: 1 MQAHPLKERGLEFALRKTTVQEFFRDFISDKAVLGIDKYHEWQGDKDVEVSPWQEVNQGVGATRVVRFVSSLEGLPVGPPTALVMQLQRVRVFGQHGMVLETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAGALSIETSFEVRFVKSTLFKKIIESRSRADTLEYHRRWFEMIEKHVARRHHERSRTREQARRSSHPLRRTVENNAGRGEKTVGPPPCQTDQMGSFRPRSPCLHPRLLSPPPCAQYDAPGVPTVCASNGAANGRTVSPDCGAMAGHSFGADCLAGRVARDATGDPRPDLKVRARGSLRLVDLTSDSHATCVRYHGAARRVMRNVEAFSVFSPCSLEGGTCNDEVYIGTN 365
MQAHPLKERGLEFALRKTTVQEFFRDFISDKAVLGIDKYHEWQGDKDVEVSPWQEVNQGVGATRVVRFVSSLEGLPVGPPTALVMQLQRVRVFGQHGMVLETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAGALSIETSFEVRFVKSTLFKKIIESRSRADTLEYHRRWFEMIEKHVARRHHERSRTREQARRSSHPLRRTVENNAGRGEKTVGPPPCQTDQMGSFRPRSPCLHPRLLSPPPCAQYDAPGVPTVCASNGAANGRTVSPDCGAMAGHSFGADCLAGRVARDATGDPRPDLKVRARGSLRLVDLTSDSHATCVRYHGAARRVMRNVEAFSVFSPCSLEGGTCNDEVYIGTN
Sbjct: 1 MQAHPLKERGLEFALRKTTVQEFFRDFISDKAVLGIDKYHEWQGDKDVEVSPWQEVNQGVGATRVVRFVSSLEGLPVGPPTALVMQLQRVRVFGQHGMVLETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAGALSIETSFEVRFVKSTLFKKIIESRSRADTLEYHRRWFEMIEKHVARRHHERSRTREQARRSSHPLRRTVENNAGRGEKTVGPPPCQTDQMGSFRPRSPCLHPRLLSPPPCAQYDAPGVPTVCASNGAANGRTVSPDCGAMAGHSFGADCLAGRVARDATGDPRPDLKVRARGSLRLVDLTSDSHATCVRYHGAARRVMRNVEAFSVFSPCSLEGGTCNDEVYIGTN 365
BLAST of EWM25093.1 vs. NCBI_GenBank
Match: gi|298706349|emb|CBJ29358.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 122.865 bits (307), Expect = 5.671e-27 Identity = 58/167 (34.73%), Postives = 103/167 (61.68%), Query Frame = 0
Query: 20 VQEFFRDFISDKAVLGIDKYHEWQGDKDVEVSPWQEVNQGVGATRVVRFVSSLEGLPVGPPTALVMQLQRVRVFGQHGMVLETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAGALSIETSFEVRFVKSTLFKKIIESRSRADTLEYHRRWFEMIEKHVARR 186
+Q+FF+ FIS+ A GI +H+ GD DV+ +PW+ +G TR +RFV + P+GP + ++LQR R++ +HG++LETS+ +E++ D F ++DR VV+P + GA+ ++ E++F KST+F+K IE++S ++T + + M + + +R
Sbjct: 351 LQDFFQLFISNDAEKGIPAFHQSMGDSDVKATPWKVAGGALGMTREIRFVHPISA-PIGPNSTRAVKLQRCRLYDEHGLILETSTHLEDIVMSDYFQIDDRCVVQP---------GQDGAVRVDVEIEIKFFKSTMFRKTIETKSLSETRQVWESFIGMTKDAIRKR 507
BLAST of EWM25093.1 vs. NCBI_GenBank
Match: gi|223993931|ref|XP_002286649.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977964|gb|EED96290.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 93.2041 bits (230), Expect = 4.821e-17 Identity = 57/162 (35.19%), Postives = 86/162 (53.09%), Query Frame = 0
Query: 19 TVQEFFRDFISDKAVLGIDKYHEWQGDKDVEVSPWQ--EVNQGVGATRVVRFVSSLEGLPVGPPTALVMQLQRVRVFGQHGMVLETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAGALSIETSFEVRFVKSTLFKKIIESRSRADTLEYHRRWFEM 178
TV EF + D A I K+ GD DVE +PW+ +G ATR + + S +P+ PPTA + Q + FG G+ LE+ + +E+VP DCF ++DR V P G + + SF++RFVK T+F++IIE+ +R E+ + W E
Sbjct: 390 TVDEFHNLVLKDNAHHSIGKFMTMIGDFDVETTPWEPPAGAKGQPATRTIHY-SHPVNVPMAPPTAKAFKKQYLNKFGSTGLCLESCTIVEDVPMTDCFVVDDRLWVSKDP-------DNCGCI-VGVSFQIRFVKGTMFRRIIENAARG---EFQKWWGEF 539
BLAST of EWM25093.1 vs. NCBI_GenBank
Match: gi|635363558|emb|CCI47913.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 91.2781 bits (225), Expect = 1.526e-16 Identity = 60/211 (28.44%), Postives = 108/211 (51.18%), Query Frame = 0
Query: 19 TVQEFFRDFISDKAVLGIDKYHEWQGDKDVEVSPWQEVNQGVGATRVVRFVSSLEGLPVGPPTALVMQLQRVRVFGQHGMVLETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAGA-LSIETSFEVRFVKSTLFKKIIESRSRADTLEYHRRWFEMIEKHVARR----------HHE----RSRTREQARRSSHPLRRTVENNAGR 214
T +EF + FI D A G+++++ G D+ + PW + N G TR R+ ++ P+GP T+LV +Q + Q ++ETS+ + +VP GD F++ DRW + P+ + E+G ++ +V F KSTL+K I S++ A+ + +W ++ +A R HH+ +R R +++ R+TV+ N +
Sbjct: 248 TPEEFMKQFIYDNAPFGLNEFYRKIGYWDITLDPWTQSNDMDGKTRSARYRVPVDA-PLGPSTSLVDSVQCCKRPNQCVYIVETSTRIVDVPYGDHFSVIDRWTIMPI-------QLESGVGTHLQIELKVAFSKSTLWKSTICSKAAAENTKKFEQWVSHAKETLAARSSSVELSGTKHHKARVPATRNRSAGMKTNISHRKTVDANKSQ 450
BLAST of EWM25093.1 vs. NCBI_GenBank
Match: gi|635363557|emb|CCI47912.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 91.2781 bits (225), Expect = 1.824e-16 Identity = 60/211 (28.44%), Postives = 108/211 (51.18%), Query Frame = 0
Query: 19 TVQEFFRDFISDKAVLGIDKYHEWQGDKDVEVSPWQEVNQGVGATRVVRFVSSLEGLPVGPPTALVMQLQRVRVFGQHGMVLETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAGA-LSIETSFEVRFVKSTLFKKIIESRSRADTLEYHRRWFEMIEKHVARR----------HHE----RSRTREQARRSSHPLRRTVENNAGR 214
T +EF + FI D A G+++++ G D+ + PW + N G TR R+ ++ P+GP T+LV +Q + Q ++ETS+ + +VP GD F++ DRW + P+ + E+G ++ +V F KSTL+K I S++ A+ + +W ++ +A R HH+ +R R +++ R+TV+ N +
Sbjct: 252 TPEEFMKQFIYDNAPFGLNEFYRKIGYWDITLDPWTQSNDMDGKTRSARYRVPVDA-PLGPSTSLVDSVQCCKRPNQCVYIVETSTRIVDVPYGDHFSVIDRWTIMPI-------QLESGVGTHLQIELKVAFSKSTLWKSTICSKAAAENTKKFEQWVSHAKETLAARSSSVELSGTKHHKARVPATRNRSAGMKTNISHRKTVDANKSQ 454
BLAST of EWM25093.1 vs. NCBI_GenBank
Match: gi|635363556|emb|CCI47911.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 91.2781 bits (225), Expect = 1.841e-16 Identity = 60/211 (28.44%), Postives = 108/211 (51.18%), Query Frame = 0
Query: 19 TVQEFFRDFISDKAVLGIDKYHEWQGDKDVEVSPWQEVNQGVGATRVVRFVSSLEGLPVGPPTALVMQLQRVRVFGQHGMVLETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAGA-LSIETSFEVRFVKSTLFKKIIESRSRADTLEYHRRWFEMIEKHVARR----------HHE----RSRTREQARRSSHPLRRTVENNAGR 214
T +EF + FI D A G+++++ G D+ + PW + N G TR R+ ++ P+GP T+LV +Q + Q ++ETS+ + +VP GD F++ DRW + P+ + E+G ++ +V F KSTL+K I S++ A+ + +W ++ +A R HH+ +R R +++ R+TV+ N +
Sbjct: 282 TPEEFMKQFIYDNAPFGLNEFYRKIGYWDITLDPWTQSNDMDGKTRSARYRVPVDA-PLGPSTSLVDSVQCCKRPNQCVYIVETSTRIVDVPYGDHFSVIDRWTIMPI-------QLESGVGTHLQIELKVAFSKSTLWKSTICSKAAAENTKKFEQWVSHAKETLAARSSSVELSGTKHHKARVPATRNRSAGMKTNISHRKTVDANKSQ 484
BLAST of EWM25093.1 vs. NCBI_GenBank
Match: gi|552840651|ref|XP_005850104.1| (hypothetical protein CHLNCDRAFT_142175 [Chlorella variabilis] >gi|307109765|gb|EFN58002.1| hypothetical protein CHLNCDRAFT_142175 [Chlorella variabilis]) HSP 1 Score: 88.1965 bits (217), Expect = 2.502e-15 Identity = 61/201 (30.35%), Postives = 96/201 (47.76%), Query Frame = 0
Query: 5 PLKERGLEFALRKTTVQEFFRDFISDKAVLGIDKYHEWQGDKDVEVSPWQE---------------------VNQGVGATRVVRFVSSLEGLPVGPPTALVMQLQRVRVFGQHGMVLETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAGALSIETSFEVRFVKSTLFKKIIESRSRADTLEYHRRWFEMIEKHVA 184
P + LEF L + EF+ F+++ + + K+H +GD + VS WQ Q VG R V+FV ++ +GPP A+ Q QR++VF + +VLETS M ++P D F++E RW V P G + +V F K T++++ IE S DTLE + W +M +++A
Sbjct: 343 PTMQLVLEFDLPCPPL-EFWSRFLANHSNW-LHKFHASRGDSSIRVSKWQRHFKARRAAAAAACTACQAALGWRQHVGMVRDVQFVHPVKAR-IGPPQAVCHQTQRLKVFARRHLVLETSQVMSDIPYADHFSVETRWDVAP----------AKGGSRVTVHIQVPFSKKTMWQRFIEKGSFDDTLEMVQGWRQMASQNLA 530
BLAST of EWM25093.1 vs. NCBI_GenBank
Match: gi|970645406|gb|KUF85883.1| (GRAM domain-containing protein 1A [Phytophthora nicotianae]) HSP 1 Score: 87.4261 bits (215), Expect = 3.357e-15 Identity = 54/172 (31.40%), Postives = 93/172 (54.07%), Query Frame = 0
Query: 19 TVQEFFRDFISDKAVLGIDKYHEWQGDKDVEVSPWQ---EVNQGVGATRVVRFVSSLEGLPVGPPTALVMQLQRVRVFGQHGM-VLETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAGALSIETSFEVRFVKSTLFKKIIESRSRADTLEYHRRWFEMIEKHVARR 186
+V F F D A G+DK++E G ++ ++PW E + G TR ++F ++ P+GP ++ V LQ ++ HG+ V+E+S+ + ++P GD F++EDRW + +P S P A + +V F KST +KK IE+R+ +D +W M ++ + R
Sbjct: 280 SVDTFMELFYLDNAPFGLDKFNEQTGSTEMSINPWMTPLEDEKSFGMTRSLQFRVPVDA-PIGPKSSQVDVLQCLKE-NDHGVRVVESSTRLVDIPYGDYFSVEDRWTI--VPRSSXP-----NACKVFIELKVVFGKSTFWKKTIETRAISDNRAKWEKWVRMAKEFLDTR 442
BLAST of EWM25093.1 vs. NCBI_GenBank
Match: gi|1210530708|dbj|GAX10659.1| (hypothetical protein FisN_14Lh167 [Fistulifera solaris]) HSP 1 Score: 87.4261 bits (215), Expect = 3.545e-15 Identity = 47/153 (30.72%), Postives = 86/153 (56.21%), Query Frame = 0
Query: 19 TVQEFFRDFISDKAVLGIDKYHEWQGDKDVEVSPWQEVNQGVGATRVVRFVSSLEGLPVGPPTALVMQLQRVRVFGQHGMVLETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAGALSIETSFEVRFVKSTLFKKIIESRSRADTLEY 171
++ FF F+ D+A I +Y E +GD + S W++V+ + +TR++ + + +P+ PP A + Q+ +G +GM++ET + + +VP DCF + DR +V+ P E L++E F++ F+KST+FK II + ++ Y
Sbjct: 341 SLDRFFTLFVEDEANYSISRYLEGRGDMSLTASLWKKVSD-IESTRMINYTHPM-NIPLAPPQADASKEQKCMRYGNYGMMIETKTIVRDVPMADCFYVTDRLMVK-------PDGDEKIKLNME--FDITFIKSTMFKGIISKTTTSEVTSY 482
BLAST of EWM25093.1 vs. NCBI_GenBank
Match: gi|675174145|ref|XP_008895957.1| (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|566013466|gb|ETI36377.1| hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|567950916|gb|ETK76623.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567979583|gb|ETL30061.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568103606|gb|ETN18263.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|570317131|gb|ETO65079.1| hypothetical protein, variant 2 [Phytophthora parasitica P1976] >gi|570940948|gb|ETP06205.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >gi|570971199|gb|ETP34318.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297]) HSP 1 Score: 87.0409 bits (214), Expect = 3.714e-15 Identity = 54/172 (31.40%), Postives = 93/172 (54.07%), Query Frame = 0
Query: 19 TVQEFFRDFISDKAVLGIDKYHEWQGDKDVEVSPWQ---EVNQGVGATRVVRFVSSLEGLPVGPPTALVMQLQRVRVFGQHGM-VLETSSSMENVPAGDCFTLEDRWVVRPLPASEAPTRTEAGALSIETSFEVRFVKSTLFKKIIESRSRADTLEYHRRWFEMIEKHVARR 186
+V F F D A G+DK++E G ++ ++PW E + G TR ++F ++ P+GP ++ V LQ ++ HG+ V+E+S+ + ++P GD F++EDRW + +P S P A + +V F KST +KK IE+R+ +D +W M ++ + R
Sbjct: 200 SVDTFMELFYLDNAPFGLDKFNEQTGSTEMSINPWMTPLEDEKSFGMTRSLQFRVPVDA-PIGPKSSQVDVLQCLKE-NDHGVRVVESSTRLVDIPYGDYFSVEDRWTI--VPRSSNP-----NACKVFIELKVVFGKSTFWKKTIETRAISDNRAKWEKWVRMAKEFLDTR 362 The following BLAST results are available for this feature:
BLAST of EWM25093.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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