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Properties
| Property Name | Value |
|---|
| Product | NLI interacting factor |
| Orig transcript id | gnl|cribi|Naga_100016g17.2916.mrna |
| Orig protein id | gnl|cribi|Naga_100016g17.2916 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:350182..351584 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5588 ID=rna5588|Name=rna5588|organism=Nannochloropsis gaditana|type=mRNA|length=1105bp
GCAAGAAACTACGTACCTCTACTTCTAGCTTTAGCAGCGCTATTTCTATG
TTTTCTCTCTGACCTCCTCCCCTTCTATCCCTGCCGCTGTCGTGTGACAT
GATACTTTAACAAATTTAAAGGTATGTATGAGTTGTGATTTTCTGTGATG
GTGGCACCGTACTCTGAATGCAGTCTGTCTAGGCGCAAGCAGGAGGTTAC
GAGACTCGACCATGAGGGAGAGAGAGACTTGTACCCCCCCATAATAACGC
TTCCTAAACTCACTGATATGTCATGACAAGCCGTGTATTTTACAATATAA
GCCACATTCCTGTATGACATTGCTTACGGCCACGCTGCCAGACCTTTGAC
AGGGTCGCAGCAGAATGGCTGCGAGTGCGAGTAGCTTCGACCTGGAAAGA
GAGCTTGCGCGTCTTTCCCTCGACACAAACGTCTACAGAGGCTATATTGA
GGGAATGATGGATGATGAGGACACTGGAGACCTGGAAGAGCGAGTAGAGG
CTGTGCTTGCGTTTTTAGGCGGCGCGACGGATGAGGACCTAAGTGGGTTT
GCGATTGACTTGAAAACCCACCATCAACTAAAACACGCGGCGGAGGCGGC
CAGGGAGACTAGCTTGATAGACGCAGATAAGGCAAAGGAAAGGCGGCGTT
ATGAAGAAAGACTTGAGCAAGACAAGAAAGCGGCGAAGACAGAGCAAGAC
AGACAAGCCGCGGAGCTTAAGTCTCGAACGGAAGGAGATCGTGCGACGAT
GCGGGGGCGAGAAGCTATTTTGAATAAATACGCGTTTGGAGACGACGTTG
TGGACGAAGATGGAAACCCGGTGGGTAAACCAAGGGGAGGAAAAGATGAT
AAGTCGGGTGCCGGCGAGGCGGATGTTGTTTTGGGTGCTTTACTAGGAGC
CAATTCAAACAAAGCTCAAGTGGAGGCCGCCGCGAAGGCAATGAGGGAGA
AGTCCAAGGCGGAGCACGAGAAGAAGGTGTTGAGAGAGAAGGAACTCCTG
CTGAGAGACAAGATGCGGAAGGAAAGTGAAAAGCGGCGAACCATGAAGAG
GGAGAAACAAAGAGGATGTGGATAAAGACATGGAAAAATAAGCAGGGTGA
ATTTG back to topprotein sequence of rna5588 >rna5588-protein ID=rna5588-protein|Name=rna5588|organism=Nannochloropsis gaditana|type=polypeptide|length=296bp
MSHDSGRDRRGGGQRENIEIALLKLEVERLRSLVPTYRRRPKLLILDLNG
LLVHRVFVGEGPRADAEGALPRVTTTWCLNSCLVYKRPYVKDFLRFCLDN
FFVGVWTTASAINATPLLKGLLPEEDVARLAFIWDGKRCTYNGETDPAKP
GKPIAFKELRRLWESKDVAGLFGPSNTLMIDDSRYKASLNPPHTAIHPPA
WDDPDAHASDDALGPLGNIRLYLQALLDSEVSVPDFVSARPFEAFQGARA
ATRLVSDASAMLDEGNSVRESESCAPLNEEDEDGEDEIVLAPGVSR back to topmRNA from alignment at CM002466.1:350182..351584+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5588 ID=rna5588|Name=rna5588|organism=Nannochloropsis gaditana|type=mRNA|length=1403bp|location=Sequence derived from alignment at CM002466.1:350182..351584+ (Nannochloropsis gaditana)
ATGTCACACGACAGCGGCAGGGatagaaggggaggaggtcagaGAGAAAA
CATAGAAATAGCGCTGCTAAAGCTAGAAGTAGAGGTACGTagtttcttgc
tttttcgAAGTTTTGCACCGCGATTTCATTTGACACACACGTACGAATGA
TATTATCTATCCCAGCGTCTACGTTCCCTAGTTCCCACTTATCGAAGAAG
ACCGAAGCTTCTAATTCTCGACCTGAATGGACTGCTCGTGCACCGAGTCT
TCGTTGGGGAGGGCCCTAGGGCAGGTGAGAAGGATGGCagcaagagagga
ggagcttcggTCGATGCGAAGATAACGCCTCGATGTACGCTTACAGATGC
AGAAGGCGCTCTACCAAGAGTTACGACAACATGGTGCCTCAATAGCTGTT
TGGTTTACAAGCGCCCTTACGTGAAAGACTTTCTCAGGTAACGTCCACAT
GGGACAGAATTACGGCACTGCCTTTTAAGAGGGATTCCACACAATGGGTA
TTGCATTTTAAGATCATCGTCCATATATACACTACGCACAGATTCTGCTT
GGATAACTTTTTCGTAGGGGTGTGGACTACGGCGTCGGCAATCAATGCAA
CACCGCTGTTGAAGGGTCTCCTGCCCGAGGTAGGTATAAGAAAAGTGCTT
GGACCTCAATAAAGCGCAAGATTTAATCTCTGGTCTTATCCGGTATGAAC
ACAGGAGGATGTGGCCCGATTGGCTTTCATTTGGGACGGCAAAAGGTAAG
TAAGGGTGCTTTCAAGTGCCTTTCGCATCTGTATGACTTGCCCATTTACG
CCGGGTTGTCTAACCCCTCAGGTGCACATACAACGGTGAGACTGATCCGG
CAAAGCCCGGGAAACCAATTGCTTTCAAGGAGTTGCGGCGCTTATGGGAA
AGCAAGGACGTTGCCGGACTGTTCGGTGAGTCCGTGTCTCTACCCATGGT
CACGAGAAAACAATGGTAGAGCTATTTTCAACAAATGATGCTTGCAGGCT
gacgcttcctcttctctttacATTTGCAGGCCCCAGCAACACCCTTATGA
TCGACGACTCGCGCTACAAGGcctccctcaaccccccccACACGGCCATC
CACCCCCCGGCCTGGGACGATCCTGATGCCCATGCCTCAGACGATGCCCT
CGGTCCTTTAGGGAATATTCGTCTTTATTTGCAGGCTCTTCTTGATAGTG
AGGTGTCTGTTCCCGATTTTGTCAGTGCTCGACCCTTTGAGGCCTTCCAA
GGCGCCCGTGCCGCTACTCGTCTCGTTTCTGACGCCAGCGCCATGCTAGA
TGAAGGCAATAGTGTACGGGAATCGGAATCTTGTGCACCATTGAacgagg
aagatgaagacgGTGAAGATGAGATCGTGCTTGCGCCGGGGGTGAGCAGA
TAG back to topCoding sequence (CDS) from alignment at CM002466.1:350182..351584+ >rna5588 ID=rna5588|Name=rna5588|organism=Nannochloropsis gaditana|type=CDS|length=6237bp|location=Sequence derived from alignment at CM002466.1:350182..351584+ (Nannochloropsis gaditana)
ATGTCACACGACAGCGGCAGGGatagaaggggaggaggtcagaGAGAAAA
CATAGAAATAGCGCTGCTAAAGCTAGAAGTAGAGCGTCTACGTTCCCTAG
TTCCCACTTATCGAAGAAGACCGAAGCTTCTAATTCTCGACCTGAATGGA
CTGCTCGTGCACCGAGTCTTCGTTGGGGAGGGCCCTAGGGCAGATGCAGA
AGGCGCTCTACCAAGAGTTACGACAACATGGTGCCTCAATAGCTGTTTGG
TTTACAAGCGCCCTTACGTGAAAGACTTTCTCAGATTCTGCTTGGATAAC
TTTTTCGTAGGGGTGTGGACTACGGCGTCGGCAATCAATGCAACACCGCT
GTTGAAGGGTCTCCTGCCCGAGGAGGATGTGGCCCGATTGGCTTTCATTT
GGGACGGCAAAAGGTGCACATACAACGGTGAGACTGATCCGGCAAAGCCC
GGGAAACCAATTGCTTTCAAGGAGTTGCGGCGCTTATGGGAAAGCAAGGA
CGTTGCCGGACTGTTCGGCCCCAGCAACACCCTTATGATCGACGACTCGC
GCTACAAGGcctccctcaaccccccccACACGGCCATCCACCCCCCGGCC
TGGGACGATCCTGATGCCCATGCCTCAGACGATGCCCTCGGTCCTTTAGG
GAATATTCGTCTTTATTTGCAGGCTCTTCTTGATAGTGAGGTGTCTGTTC
CCGATTTTGTCAGTGCTCGACCCTTTGAGGCCTTCCAAGGCGCCCGTGCC
GCTACTCGTCTCGTTTCTGACGCCAGCGCCATGCTAGATGAAGGCAATAG
TGTACGGGAATCGGAATCTTGTGCACCATTGAacgaggaagatgaagacg
GTGAAGATGAGATCGTGCTTGCGCCGGGGGTGAGCAGATAGATGTCACAC
GACAGCGGCAGGGatagaaggggaggaggtcagaGAGAAAACATAGAAAT
AGCGCTGCTAAAGCTAGAAGTAGAGCGTCTACGTTCCCTAGTTCCCACTT
ATCGAAGAAGACCGAAGCTTCTAATTCTCGACCTGAATGGACTGCTCGTG
CACCGAGTCTTCGTTGGGGAGGGCCCTAGGGCAGATGCAGAAGGCGCTCT
ACCAAGAGTTACGACAACATGGTGCCTCAATAGCTGTTTGGTTTACAAGC
GCCCTTACGTGAAAGACTTTCTCAGATTCTGCTTGGATAACTTTTTCGTA
GGGGTGTGGACTACGGCGTCGGCAATCAATGCAACACCGCTGTTGAAGGG
TCTCCTGCCCGAGGAGGATGTGGCCCGATTGGCTTTCATTTGGGACGGCA
AAAGGTGCACATACAACGGTGAGACTGATCCGGCAAAGCCCGGGAAACCA
ATTGCTTTCAAGGAGTTGCGGCGCTTATGGGAAAGCAAGGACGTTGCCGG
ACTGTTCGGCCCCAGCAACACCCTTATGATCGACGACTCGCGCTACAAGG
cctccctcaaccccccccACACGGCCATCCACCCCCCGGCCTGGGACGAT
CCTGATGCCCATGCCTCAGACGATGCCCTCGGTCCTTTAGGGAATATTCG
TCTTTATTTGCAGGCTCTTCTTGATAGTGAGGTGTCTGTTCCCGATTTTG
TCAGTGCTCGACCCTTTGAGGCCTTCCAAGGCGCCCGTGCCGCTACTCGT
CTCGTTTCTGACGCCAGCGCCATGCTAGATGAAGGCAATAGTGTACGGGA
ATCGGAATCTTGTGCACCATTGAacgaggaagatgaagacgGTGAAGATG
AGATCGTGCTTGCGCCGGGGGTGAGCAGATAGATGTCACACGACAGCGGC
AGGGatagaaggggaggaggtcagaGAGAAAACATAGAAATAGCGCTGCT
AAAGCTAGAAGTAGAGCGTCTACGTTCCCTAGTTCCCACTTATCGAAGAA
GACCGAAGCTTCTAATTCTCGACCTGAATGGACTGCTCGTGCACCGAGTC
TTCGTTGGGGAGGGCCCTAGGGCAGATGCAGAAGGCGCTCTACCAAGAGT
TACGACAACATGGTGCCTCAATAGCTGTTTGGTTTACAAGCGCCCTTACG
TGAAAGACTTTCTCAGATTCTGCTTGGATAACTTTTTCGTAGGGGTGTGG
ACTACGGCGTCGGCAATCAATGCAACACCGCTGTTGAAGGGTCTCCTGCC
CGAGGAGGATGTGGCCCGATTGGCTTTCATTTGGGACGGCAAAAGGTGCA
CATACAACGGTGAGACTGATCCGGCAAAGCCCGGGAAACCAATTGCTTTC
AAGGAGTTGCGGCGCTTATGGGAAAGCAAGGACGTTGCCGGACTGTTCGG
CCCCAGCAACACCCTTATGATCGACGACTCGCGCTACAAGGcctccctca
accccccccACACGGCCATCCACCCCCCGGCCTGGGACGATCCTGATGCC
CATGCCTCAGACGATGCCCTCGGTCCTTTAGGGAATATTCGTCTTTATTT
GCAGGCTCTTCTTGATAGTGAGGTGTCTGTTCCCGATTTTGTCAGTGCTC
GACCCTTTGAGGCCTTCCAAGGCGCCCGTGCCGCTACTCGTCTCGTTTCT
GACGCCAGCGCCATGCTAGATGAAGGCAATAGTGTACGGGAATCGGAATC
TTGTGCACCATTGAacgaggaagatgaagacgGTGAAGATGAGATCGTGC
TTGCGCCGGGGGTGAGCAGATAGATGTCACACGACAGCGGCAGGGataga
aggggaggaggtcagaGAGAAAACATAGAAATAGCGCTGCTAAAGCTAGA
AGTAGAGCGTCTACGTTCCCTAGTTCCCACTTATCGAAGAAGACCGAAGC
TTCTAATTCTCGACCTGAATGGACTGCTCGTGCACCGAGTCTTCGTTGGG
GAGGGCCCTAGGGCAGATGCAGAAGGCGCTCTACCAAGAGTTACGACAAC
ATGGTGCCTCAATAGCTGTTTGGTTTACAAGCGCCCTTACGTGAAAGACT
TTCTCAGATTCTGCTTGGATAACTTTTTCGTAGGGGTGTGGACTACGGCG
TCGGCAATCAATGCAACACCGCTGTTGAAGGGTCTCCTGCCCGAGGAGGA
TGTGGCCCGATTGGCTTTCATTTGGGACGGCAAAAGGTGCACATACAACG
GTGAGACTGATCCGGCAAAGCCCGGGAAACCAATTGCTTTCAAGGAGTTG
CGGCGCTTATGGGAAAGCAAGGACGTTGCCGGACTGTTCGGCCCCAGCAA
CACCCTTATGATCGACGACTCGCGCTACAAGGcctccctcaacccccccc
ACACGGCCATCCACCCCCCGGCCTGGGACGATCCTGATGCCCATGCCTCA
GACGATGCCCTCGGTCCTTTAGGGAATATTCGTCTTTATTTGCAGGCTCT
TCTTGATAGTGAGGTGTCTGTTCCCGATTTTGTCAGTGCTCGACCCTTTG
AGGCCTTCCAAGGCGCCCGTGCCGCTACTCGTCTCGTTTCTGACGCCAGC
GCCATGCTAGATGAAGGCAATAGTGTACGGGAATCGGAATCTTGTGCACC
ATTGAacgaggaagatgaagacgGTGAAGATGAGATCGTGCTTGCGCCGG
GGGTGAGCAGATAGATGTCACACGACAGCGGCAGGGatagaaggggagga
ggtcagaGAGAAAACATAGAAATAGCGCTGCTAAAGCTAGAAGTAGAGCG
TCTACGTTCCCTAGTTCCCACTTATCGAAGAAGACCGAAGCTTCTAATTC
TCGACCTGAATGGACTGCTCGTGCACCGAGTCTTCGTTGGGGAGGGCCCT
AGGGCAGATGCAGAAGGCGCTCTACCAAGAGTTACGACAACATGGTGCCT
CAATAGCTGTTTGGTTTACAAGCGCCCTTACGTGAAAGACTTTCTCAGAT
TCTGCTTGGATAACTTTTTCGTAGGGGTGTGGACTACGGCGTCGGCAATC
AATGCAACACCGCTGTTGAAGGGTCTCCTGCCCGAGGAGGATGTGGCCCG
ATTGGCTTTCATTTGGGACGGCAAAAGGTGCACATACAACGGTGAGACTG
ATCCGGCAAAGCCCGGGAAACCAATTGCTTTCAAGGAGTTGCGGCGCTTA
TGGGAAAGCAAGGACGTTGCCGGACTGTTCGGCCCCAGCAACACCCTTAT
GATCGACGACTCGCGCTACAAGGcctccctcaaccccccccACACGGCCA
TCCACCCCCCGGCCTGGGACGATCCTGATGCCCATGCCTCAGACGATGCC
CTCGGTCCTTTAGGGAATATTCGTCTTTATTTGCAGGCTCTTCTTGATAG
TGAGGTGTCTGTTCCCGATTTTGTCAGTGCTCGACCCTTTGAGGCCTTCC
AAGGCGCCCGTGCCGCTACTCGTCTCGTTTCTGACGCCAGCGCCATGCTA
GATGAAGGCAATAGTGTACGGGAATCGGAATCTTGTGCACCATTGAacga
ggaagatgaagacgGTGAAGATGAGATCGTGCTTGCGCCGGGGGTGAGCA
GATAGATGTCACACGACAGCGGCAGGGatagaaggggaggaggtcagaGA
GAAAACATAGAAATAGCGCTGCTAAAGCTAGAAGTAGAGCGTCTACGTTC
CCTAGTTCCCACTTATCGAAGAAGACCGAAGCTTCTAATTCTCGACCTGA
ATGGACTGCTCGTGCACCGAGTCTTCGTTGGGGAGGGCCCTAGGGCAGAT
GCAGAAGGCGCTCTACCAAGAGTTACGACAACATGGTGCCTCAATAGCTG
TTTGGTTTACAAGCGCCCTTACGTGAAAGACTTTCTCAGATTCTGCTTGG
ATAACTTTTTCGTAGGGGTGTGGACTACGGCGTCGGCAATCAATGCAACA
CCGCTGTTGAAGGGTCTCCTGCCCGAGGAGGATGTGGCCCGATTGGCTTT
CATTTGGGACGGCAAAAGGTGCACATACAACGGTGAGACTGATCCGGCAA
AGCCCGGGAAACCAATTGCTTTCAAGGAGTTGCGGCGCTTATGGGAAAGC
AAGGACGTTGCCGGACTGTTCGGCCCCAGCAACACCCTTATGATCGACGA
CTCGCGCTACAAGGcctccctcaaccccccccACACGGCCATCCACCCCC
CGGCCTGGGACGATCCTGATGCCCATGCCTCAGACGATGCCCTCGGTCCT
TTAGGGAATATTCGTCTTTATTTGCAGGCTCTTCTTGATAGTGAGGTGTC
TGTTCCCGATTTTGTCAGTGCTCGACCCTTTGAGGCCTTCCAAGGCGCCC
GTGCCGCTACTCGTCTCGTTTCTGACGCCAGCGCCATGCTAGATGAAGGC
AATAGTGTACGGGAATCGGAATCTTGTGCACCATTGAacgaggaagatga
agacgGTGAAGATGAGATCGTGCTTGCGCCGGGGGTGAGCAGATAGATGT
CACACGACAGCGGCAGGGatagaaggggaggaggtcagaGAGAAAACATA
GAAATAGCGCTGCTAAAGCTAGAAGTAGAGCGTCTACGTTCCCTAGTTCC
CACTTATCGAAGAAGACCGAAGCTTCTAATTCTCGACCTGAATGGACTGC
TCGTGCACCGAGTCTTCGTTGGGGAGGGCCCTAGGGCAGATGCAGAAGGC
GCTCTACCAAGAGTTACGACAACATGGTGCCTCAATAGCTGTTTGGTTTA
CAAGCGCCCTTACGTGAAAGACTTTCTCAGATTCTGCTTGGATAACTTTT
TCGTAGGGGTGTGGACTACGGCGTCGGCAATCAATGCAACACCGCTGTTG
AAGGGTCTCCTGCCCGAGGAGGATGTGGCCCGATTGGCTTTCATTTGGGA
CGGCAAAAGGTGCACATACAACGGTGAGACTGATCCGGCAAAGCCCGGGA
AACCAATTGCTTTCAAGGAGTTGCGGCGCTTATGGGAAAGCAAGGACGTT
GCCGGACTGTTCGGCCCCAGCAACACCCTTATGATCGACGACTCGCGCTA
CAAGGcctccctcaaccccccccACACGGCCATCCACCCCCCGGCCTGGG
ACGATCCTGATGCCCATGCCTCAGACGATGCCCTCGGTCCTTTAGGGAAT
ATTCGTCTTTATTTGCAGGCTCTTCTTGATAGTGAGGTGTCTGTTCCCGA
TTTTGTCAGTGCTCGACCCTTTGAGGCCTTCCAAGGCGCCCGTGCCGCTA
CTCGTCTCGTTTCTGACGCCAGCGCCATGCTAGATGAAGGCAATAGTGTA
CGGGAATCGGAATCTTGTGCACCATTGAacgaggaagatgaagacgGTGA
AGATGAGATCGTGCTTGCGCCGGGGGTGAGCAGATAG back to top
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