EWM25107.1, cds5574 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25107.1 vs. NCBI_GenBank
Match: gi|585106745|gb|EWM25107.1| (NLI interacting factor [Nannochloropsis gaditana]) HSP 1 Score: 602.823 bits (1553), Expect = 0.000e+0 Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0
Query: 1 MSHDSGRDRRGGGQRENIEIALLKLEVERLRSLVPTYRRRPKLLILDLNGLLVHRVFVGEGPRADAEGALPRVTTTWCLNSCLVYKRPYVKDFLRFCLDNFFVGVWTTASAINATPLLKGLLPEEDVARLAFIWDGKRCTYNGETDPAKPGKPIAFKELRRLWESKDVAGLFGPSNTLMIDDSRYKASLNPPHTAIHPPAWDDPDAHASDDALGPLGNIRLYLQALLDSEVSVPDFVSARPFEAFQGARAATRLVSDASAMLDEGNSVRESESCAPLNEEDEDGEDEIVLAPGVSR 296
MSHDSGRDRRGGGQRENIEIALLKLEVERLRSLVPTYRRRPKLLILDLNGLLVHRVFVGEGPRADAEGALPRVTTTWCLNSCLVYKRPYVKDFLRFCLDNFFVGVWTTASAINATPLLKGLLPEEDVARLAFIWDGKRCTYNGETDPAKPGKPIAFKELRRLWESKDVAGLFGPSNTLMIDDSRYKASLNPPHTAIHPPAWDDPDAHASDDALGPLGNIRLYLQALLDSEVSVPDFVSARPFEAFQGARAATRLVSDASAMLDEGNSVRESESCAPLNEEDEDGEDEIVLAPGVSR
Sbjct: 1 MSHDSGRDRRGGGQRENIEIALLKLEVERLRSLVPTYRRRPKLLILDLNGLLVHRVFVGEGPRADAEGALPRVTTTWCLNSCLVYKRPYVKDFLRFCLDNFFVGVWTTASAINATPLLKGLLPEEDVARLAFIWDGKRCTYNGETDPAKPGKPIAFKELRRLWESKDVAGLFGPSNTLMIDDSRYKASLNPPHTAIHPPAWDDPDAHASDDALGPLGNIRLYLQALLDSEVSVPDFVSARPFEAFQGARAATRLVSDASAMLDEGNSVRESESCAPLNEEDEDGEDEIVLAPGVSR 296
BLAST of EWM25107.1 vs. NCBI_GenBank
Match: gi|553178208|ref|XP_005852529.1| (hypothetical protein NGA_0707200 [Nannochloropsis gaditana CCMP526] >gi|422296003|gb|EKU23302.1| hypothetical protein NGA_0707200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 261.922 bits (668), Expect = 1.190e-85 Identity = 136/175 (77.71%), Postives = 136/175 (77.71%), Query Frame = 0
Query: 40 RPKLLILDLNGLLVHRVFVGEGPRADAEGALPRVTTTWCLNSCLVYKRPYVKDFLRFCLDNFFVGVWTTASAINATPLLKGLLPEEDVARLAFIWDGKRCTYNGETDPAKPGKPIAFKELRRLWESKDVAGLFGPSNTLMIDDSRYKASLNPPHTAIHPPAWDDPDAHASDDALG 214
RPKLLILDLNGLLVHRVFVGEGPRA GVWTTASAINATPLLKGLLPEEDVARLAFIWDGKRCTYNGETDPAKPGKPIAFKELRRLWESKDVAGLFGPSNTLMIDDSRYKASLNPPHTAIHPPAWDDPDAHASDDALG
Sbjct: 4 RPKLLILDLNGLLVHRVFVGEGPRA---------------------------------------GVWTTASAINATPLLKGLLPEEDVARLAFIWDGKRCTYNGETDPAKPGKPIAFKELRRLWESKDVAGLFGPSNTLMIDDSRYKASLNPPHTAIHPPAWDDPDAHASDDALG 139
BLAST of EWM25107.1 vs. NCBI_GenBank
Match: gi|703119148|ref|XP_010101794.1| (Uncharacterized FCP1-like domain-containing protein [Morus notabilis] >gi|587901374|gb|EXB89649.1| Uncharacterized FCP1-like domain-containing protein [Morus notabilis]) HSP 1 Score: 151.754 bits (382), Expect = 7.465e-41 Identity = 88/215 (40.93%), Postives = 127/215 (59.07%), Query Frame = 0
Query: 34 VPTYRRRPKLLILDLNGLLVHRVFVGEGPRADAEGALPRVTTTWCLNSCLVYKRPYVKDFLRFCLDNFFVGVWTTASAINATPLLKGLLPEEDVARLAFIWDGKRCTYNGETDPAKPGKPIAFKELRRLWESKDV-----AGLFGPSNTLMIDDSRYKASLNPPHTAIHPPAWDDPDAHASDDA-LGPLGNIRLYLQALLDSEVSVPDFVSARPF 242
+ + + + KLL+LD+NGLL ++F + + ++P + S LVYKRPY +F+ FCL+ F VG+W+TA N +L ++ E ++L F+WD CT +G K GKPI K+L++LW++ + G F SNTL+IDD YKA LNP H+AI P D+ A DDA LGP G +RLYL+ L D++ +V FV RPF
Sbjct: 32 LQSVKIKKKLLVLDVNGLLCQKIFRYDKAKLPNSSSVPVIEC----GSFLVYKRPYCDEFMNFCLERFEVGIWSTAREGNLNSVLDCIM-EGLKSKLLFVWDQSHCTSSGFYTLEKKGKPIFLKDLKKLWKNINAILPESKGQFSKSNTLLIDDKPYKALLNPLHSAIFP---DEYKADNVDDASLGPKGELRLYLEELADAD-NVTCFVEERPF 237
BLAST of EWM25107.1 vs. NCBI_GenBank
Match: gi|971509621|dbj|GAQ88573.1| (hypothetical protein KFL_004410010 [Klebsormidium nitens]) HSP 1 Score: 151.754 bits (382), Expect = 9.847e-38 Identity = 84/201 (41.79%), Postives = 117/201 (58.21%), Query Frame = 0
Query: 42 KLLILDLNGLLVHRVFVGEGPRADAEGALPRVTTTWCLNSCLVYKRPYVKDFLRFCLDNFFVGVWTTASAINATPLLKGLLPEEDVARLAFIWDGKRCTYNGETDPAKPGKPIAFKELRRLWESKDVAGLFGPSNTLMIDDSRYKASLNPPHTAIHPPAWDDPDAHASDDALGPLGNIRLYLQALLDSEVSVPDFVSARPF 242
KLLILD+NG L+ +F + +G +N+ L+Y RP+ +DF++FCLDNF VGVW++A N L + + E V++LAFIW +CT G P KPI KELRR+WES +G++GPSNTL+IDDS YKA NPP+T + P + D L P G IR +L+ + + V ++V A PF
Sbjct: 86 KLLILDVNGFLIDTMFKFD------KGKPTLREHDGTVNNFLIYNRPHCEDFIKFCLDNFVVGVWSSARRHNVEGLTRYIFGEA-VSQLAFIWGQDQCTNTGFMHPENRNKPIFLKELRRVWESPPFSGVYGPSNTLLIDDSAYKALRNPPYTGVFPKTYVADGRE--QDCLAPGGRIRSFLEGVHVA-ADVREYVKAHPF 276
BLAST of EWM25107.1 vs. NCBI_GenBank
Match: gi|566206315|ref|XP_006374416.1| (hypothetical protein POPTR_0015s07000g [Populus trichocarpa] >gi|550322178|gb|ERP52213.1| hypothetical protein POPTR_0015s07000g [Populus trichocarpa]) HSP 1 Score: 146.362 bits (368), Expect = 6.035e-37 Identity = 88/223 (39.46%), Postives = 127/223 (56.95%), Query Frame = 0
Query: 36 TYRRRPKLLILDLNGLLVHRV-FVGEGPRADAEGALPRVTTTWCLNSCLVYKRPYVKDFLRFCLDNFFVGVWTTASAINATPLLKGLLPEEDVARLAFIWDGKRCTYNGETDPAKPGKPIAFKELRRLWESKDVA-----GLFGPSNTLMIDDSRYKASLNPPHTAIHPPAWDDPDAHASDDALGPLGNIRLYLQALLDSEVSVPDFVSARPFEAFQGARAAT 252
T R KLLILD+NGLL V +V G +A+ + + +C +KRP+ DFLRFC + F VGVW++ + N PL++ L + +L F WD CT G T KP+ KEL+++WE + G + SNTL++DDS YKA NP HTAI PP++ D +D +LGP G++R+YL+ L ++E +V ++V+ PF G RA T
Sbjct: 222 TGRVTKKLLILDVNGLLADIVSYVSAGYQANI--VVSGKSGEYCF-----FKRPFCDDFLRFCFEKFDVGVWSSRTKRNVNPLIEFLFGDSR-HKLLFCWDQSHCTDTGFTTVENRSKPLFLKELKKIWEYLESTLQLNKGEYDESNTLLLDDSPYKALCNPVHTAIFPPSYGYRD--LADSSLGPEGDLRVYLERLAEAE-NVQEYVAQHPF----GQRAIT 429
BLAST of EWM25107.1 vs. NCBI_GenBank
Match: gi|571562123|ref|XP_006605240.1| (PREDICTED: uncharacterized protein LOC100809489 [Glycine max] >gi|734316784|gb|KHN02266.1| Putative FCP1 likey domain-containing protein [Glycine soja] >gi|947046489|gb|KRG96118.1| hypothetical protein GLYMA_19G190500 [Glycine max]) HSP 1 Score: 139.428 bits (350), Expect = 3.471e-36 Identity = 88/223 (39.46%), Postives = 130/223 (58.30%), Query Frame = 0
Query: 23 LKLEVERLRSLVPTYRRRPKLLILDLNGLL---VHRVFVGEGPRADAEGALPRVTTTWCLNSCLVYKRPYVKDFLRFCLDNFFVGVWTTASAINATPLLKGLLPEEDVARLAFIWDGKRCTYNGETDPAKPGKPIAFKELRRLWESKDVAGLFGPSNTLMIDDSRYKASLNPPHTAIHPPAWDDPDAHASDDALGPLGNIRLYLQALLDSEVSVPDFVSARPF 242
L L +E+L +L P R KLLI++LNGLL VHR E P++ A R LV+KRP+ ++F++FCL+ F VG+W++A N L + ++L F+WD ++CT +G K KP+ FKEL+++WE+ G + SNTL+IDD YKA LNPP+TA+ P ++ PD +A D AL P G + YL+ +++S V +V PF
Sbjct: 28 LNLHLEKL-NLGP----RKKLLIMNLNGLLLLRVHRCSKSEIPKSRAADGHYR--------GYLVFKRPFSQEFMKFCLERFEVGIWSSAMEHNIDAALNYAIGSLR-SKLLFVWDQRQCTNSGFKSLEKASKPLFFKELKKVWETVKKGGPYSASNTLLIDDRPYKAFLNPPNTAVFPQSY-KPDNYA-DRALDPKGLMCTYLKGVMESP-DVQSYVKDHPF 233
BLAST of EWM25107.1 vs. NCBI_GenBank
Match: gi|743927200|ref|XP_011007778.1| (PREDICTED: probable C-terminal domain small phosphatase isoform X2 [Populus euphratica]) HSP 1 Score: 140.198 bits (352), Expect = 1.365e-35 Identity = 86/221 (38.91%), Postives = 123/221 (55.66%), Query Frame = 0
Query: 38 RRRPKLLILDLNGLLVHRV-FVGEGPRADAEGALPRVTTTWCLNSCLVYKRPYVKDFLRFCLDNFFVGVWTTASAINATPLLKGLLPEEDVARLAFIWDGKRCTYNGETDPAKPGKPIAFKELRRLWESKDVA-----GLFGPSNTLMIDDSRYKASLNPPHTAIHPPAWDDPDAHASDDALGPLGNIRLYLQALLDSEVSVPDFVSARPFEAFQGARAAT 252
R KLLILD+NGLL V +V G +A+ ++ V+KRP+ DFLRFC + F VGVW++ + N PL+ L + +L F WD CT G T KP+ KEL+++WE + G + SNTL++DDS YKA NP HTAI P ++ D +D +LGP G++R+YL+ L ++E +V ++V+ PF G RA T
Sbjct: 108 RVTKKLLILDVNGLLADIVSYVSAGYQANI-----------VVSGKSVFKRPFCDDFLRFCFEKFDVGVWSSRTKRNVNPLIDFLFGDSR-HKLLFCWDQSHCTDTGFTTVENRSKPLFLKELKKIWEYLESTLQLNKGEYDESNTLLLDDSPYKALCNPVHTAIFPHSYGYRD--IADSSLGPEGDLRVYLERLAEAE-NVQEYVAQHPF----GQRAIT 309
BLAST of EWM25107.1 vs. NCBI_GenBank
Match: gi|1179531446|ref|XP_020686838.1| (uncharacterized protein LOC110102722 isoform X4 [Dendrobium catenatum]) HSP 1 Score: 140.198 bits (352), Expect = 1.500e-35 Identity = 85/234 (36.32%), Postives = 125/234 (53.42%), Query Frame = 0
Query: 40 RPKLLILDLNGLLVHRVFVGEGPRADAEGALPRVTTTWCLNSCLVYKRPYVKDFLRFCLDNFFVGVWTTASAINATPLLKGLLPEEDVARLAFIWDGKRCTYNGETDPAKPGKPIAFKELRRLWESKDVA-----GLFGPSNTLMIDDSRYKASLNPPHTAIHPPAWDDPDAHASDDALGPLGNIRLYLQALLDSEVSVPDFVSARPFEAFQGARAATRLVSDASAMLDEGNSV 268
R KLL+LDLNG+L VF G LP +N V+KRP++ DFL FC + F VG+W++ + N ++ ++ + RL F WD +CT G KP+ KEL +LW+ ++ + G + PSNTL++DDS YKA NPPHTAI P +D D D+ LGP G IRLYL+++ ++ V V F Q + ++ S ++D+ NS+
Sbjct: 130 RKKLLVLDLNGILCDVVFGSHG------SCLPYKR----VNMRSVFKRPFLDDFLTFCFERFVVGIWSSRNKNNIIGVINYIMGDSK-DRLLFCWDQSKCTVTGFNTIENSHKPLVLKELIKLWDKEEASLPWDKGEYSPSNTLLVDDSPYKALCNPPHTAIFPFPYDFRDER--DNCLGPGGAIRLYLESIASAD-DVQKHVKKHSFGQ-QAITSKDKMWSFYEKIIDKNNSM 348
BLAST of EWM25107.1 vs. NCBI_GenBank
Match: gi|566192657|ref|XP_006378831.1| (hypothetical protein POPTR_0010s25040g [Populus trichocarpa] >gi|550330560|gb|ERP56628.1| hypothetical protein POPTR_0010s25040g [Populus trichocarpa]) HSP 1 Score: 137.887 bits (346), Expect = 1.546e-35 Identity = 90/225 (40.00%), Postives = 125/225 (55.56%), Query Frame = 0
Query: 24 KLEVERLRSLVPTYRRRPKLLILDLNGLLVHRVFVGEGPRADA-EGALPRVTTTWCLNSCLVYKRPYVKDFLRFCLDNFFVGVWTTASAINATPLLKGLLPEEDVARLAFIWDGKRCTYNGETDPAKPGKPIAFKELRRLWESKDV-----AGLFGPSNTLMIDDSRYKASLNPPHTAIHPPAWDDPDAHASDDALGPLGNIRLYLQALLDSEVSVPDFVSARPF 242
++E+E+L SL P + KLL+LDL G+L RVF RA+ + P + VYKRP+ ++F+RFCL+ F VG+W++A N L ++ E RL F+WD CT +G + KPI FKEL++LW+++ G + SNT++IDD YKA LNPP TAI P + PD D LGP G +RLYL L + VP +V PF
Sbjct: 22 EIELEKL-SLGPDGSK--KLLVLDLAGVLCDRVF--HKNRANIPDNRTPDAASGSFFGKFSVYKRPFCEEFVRFCLERFDVGIWSSARRTNLETALDCVIGELK-GRLLFVWDQDDCTDSGFSTKENKNKPIFFKELKKLWDNESSNLPWRKGQYSSSNTILIDDKPYKALLNPPSTAIFPTEY-KPD-QLDDATLGPNGELRLYLDGLARA-ADVPGYVKEHPF 237
BLAST of EWM25107.1 vs. NCBI_GenBank
Match: gi|566192655|ref|XP_006378830.1| (hypothetical protein POPTR_0010s25040g [Populus trichocarpa] >gi|118481927|gb|ABK92897.1| unknown [Populus trichocarpa] >gi|550330559|gb|ERP56627.1| hypothetical protein POPTR_0010s25040g [Populus trichocarpa]) HSP 1 Score: 137.117 bits (344), Expect = 3.233e-35 Identity = 91/225 (40.44%), Postives = 126/225 (56.00%), Query Frame = 0
Query: 24 KLEVERLRSLVPTYRRRPKLLILDLNGLLVHRVFVGEGPRADA-EGALPRVTTTWCLNSCLVYKRPYVKDFLRFCLDNFFVGVWTTASAINATPLLKGLLPEEDVARLAFIWDGKRCTYNGETDPAKPGKPIAFKELRRLWESKDV-----AGLFGPSNTLMIDDSRYKASLNPPHTAIHPPAWDDPDAHASDDALGPLGNIRLYLQALLDSEVSVPDFVSARPF 242
++E+E+L SL P + KLL+LDL G+L RVF RA+ + P + S VYKRP+ ++F+RFCL+ F VG+W++A N L ++ E RL F+WD CT +G + KPI FKEL++LW+++ G + SNT++IDD YKA LNPP TAI P + PD D LGP G +RLYL L + VP +V PF
Sbjct: 22 EIELEKL-SLGPDGSK--KLLVLDLAGVLCDRVF--HKNRANIPDNRTPDAAS----GSFFVYKRPFCEEFVRFCLERFDVGIWSSARRTNLETALDCVIGELK-GRLLFVWDQDDCTDSGFSTKENKNKPIFFKELKKLWDNESSNLPWRKGQYSSSNTILIDDKPYKALLNPPSTAIFPTEY-KPD-QLDDATLGPNGELRLYLDGLARA-ADVPGYVKEHPF 233 The following BLAST results are available for this feature:
BLAST of EWM25107.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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