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Properties
| Property Name | Value |
|---|
| Product | Uncharacterized conserved protein UCP033563 |
| Orig transcript id | gnl|cribi|Naga_100016g23.2942.mrna |
| Orig protein id | gnl|cribi|Naga_100016g23.2942 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:340862..343431 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5583 ID=rna5583|Name=rna5583|organism=Nannochloropsis gaditana|type=mRNA|length=3498bp
CAAGCCGTCAATACATCACTTGCGTGCGTCTTTGCGATCGTTTGACACTG
GTGGTTCTGTTCGTACATGACCATTTATTTGCTGCTGACCCACGTGCTGC
TGGTTGGCTGGCGGGCGGTGTGCCCTTCTCCGTCTGGCAACGCCCGCCGG
CCCCCCCTAGTCATCATGCATCTTCTCGACCCGCGTGCTTTACGCCTAGG
ATGGACGTCATTGTCCCATGTACCTGCCGCCTCTCAAAAAACAGTGTCTG
TACTTTTCGATTTATTCGTTCTTGGGCGTGATGTATGGTCGTAAGTCACG
GTACGAAGACGACAAGTGTAAGGGGACGCACGAGGACGAGCAAAGCTTTG
GCTTGGCCCCCTCTCCTTGTCTCTTAATTAGTTGCGTCCTTGCACAACAA
CCAACACAAACTCGTGTAGTTGACACACTATTGAATAAGAGTTGGAAGAG
GATGGTGCGATTTCAGGATTTTGGCATCTAGTAGACCTACAAGCGACATG
CTCTTCAATGCATTTGGGAGTGGCAGAGTGCTCAAGACAAGCTGTCTTCC
AGAAATCCATACCACACCCTCACTTACGTGCCCCCTACTTGAAAACACTT
TTAGGATGGCGTTTGCTGCAAGCCGAATGCTCAAGAGAGGCCTGACCTCC
TTCAAGGGGATCGCCCGCGCTTCCACACCTGCTGCATTTTGTAAGTTGGG
CGGGATGCTCGACAGGTCCAGGAGCTTGCACGTCGGACAGTGTCTGCAAG
CCTGCTCTCTGAGGCCATGTCATTAGAGTATACTTTGTGCGAGAAAAATT
TTCGAGGCTGACATCCTGAATCGGCCCACTTTTCCCGGCATTGACAAAAA
CAGCGCGGCGATGGATGTCAGAAGCGGCCGAGGCCCCAGTCAAGGATGGC
CGTGTGCTGCAAGTCATCGGTGCTGTCGTTGACGTGGAGTTTGACGACAA
ACTGCCTCGTGTTCTTAACGCCCTTGAGGTGCAGGTAGAAAAGGGCCGCC
CCCGCCTGGTGCTGGAGGTGGCGCAACACATCGGAGAGCGCGTGGTCCGC
ACTATTGCCATGGACGCCACTGAAGGCTTAGTTCGCGGACAACCTGTGAA
AGACCAGGGAGACGCCATTCAGGTGCCGGTGGGTCCGGGTACGCTAGGCC
GCATCGTGAACGTGATTGGTGAACCCATCGACGAGAAGGGTCCCATTAAA
GCGGCTGCGCACTGGTCTATCCACCGCCCGGCCCCCCTCCTGACCGAGCA
GGGTGAGTCCGATGCTATCCTCTCTACGGGCATCAAGGTCATTGACTTGA
TCGGCCCGTACTCCAAGGGCGGAAAGATTGGCCTCTTCGGCGGGGCAGGT
GTGGGGAAGACGGTCGTGATCATGGAGCTGATCAACAACGTGGCCATGAA
CCACGGTGGCTTCTCTGTCTTTGCGGGCGTGGGCGAGCGGACTCGCGAGG
GAAACGATTTGTACCATGAAATGATGACGTCCGGTGTCATCAAGATCGAT
AAGAACACCGGATCCACGGAGGGCTCCAAAGCCGCCCTTGTGTACGGCCA
GATGAACGAGCCGCCCGGGGCCCGCGCCCGTGTCGCCCTGACGGGGTTGA
CGATCGCTGAGTACTTCCGTGATGTGGAAGGGCAAGACGTGTTGCTCTTC
GTCGACAACATTTTCCGCTTCACCCAGGCCGGTGCCGAGGTGTCGGCCCT
CTTGGGCCGCATCCCCTCTGCTGTCGGATACCAGCCCACGCTTGCCACGG
ACATGGGAACGTTGCAGGAGCGCATTACCTCGACGCTCAAAGGGTCTATT
ACTTCCGTGCAGGCCGTGTACGTGCCCGCTGATGACTTGACGGACCCTGC
TCCCGCGACGACCTTCGCCCATCTGGACGCCACCACTGTGCTGTCCCGCA
AGATCGCCGAGTTGGGCATCTACCCCGCCGTGGACCCCCTGGACTCGTCG
TCTCGTCTGATGGACCCCGAGTACGTGTCCATGGAGCACTACAAGACCAC
GCGCGACACCCAGAAGCTGCTTCAGGATTACAAGTCTCTCCAGGATATCA
TCGCCATTCTGGGGATGGACGAGCTCTCCGAGGAGGACAAACTGACTGTG
GCTCGTGCCCGCAAGGCGCAGCGTTTCATGTCCCAGCCCTTCCACGTCGC
TGAGGTCTTCACCGGTTTCTCGGGCAAGTTTGTGCCTTTGGAGGAGTCTA
TCTCCGGCTTCACGGAGATCCTCCGCGGTACCTACGATGACATCCCTGAG
CAAGCCTTCTACATGGTGGGTAACATCAAGGATGTGCAGGAGAAGGCCAC
GAAACTGGCCAAGTCTTTGGAGAAGGAGACCAAGAGCTCTGCCGCAGCGG
CAGCTGCTGCCCTCCAGTACTCTCTCGGAGGCCAGGCGGACATGTTGAGC
AAGGGCATGGAGCAGTACGGCATCAAGAACGATAAATCTGCTTCCCAGCT
CCAGGCCGAGATCGAGCCCTTCACAGTCCCTCCCTCTCTTATTTCCGGAT
TCGATTCCGTCCCCGGTGTAGGATCCGAATTGTCGGAGGCAGAGATTAAG
GAGAAGTTCACGGAGGCCTACAAAGCTCTCACCCCCGAGCAGCAGGCGGA
AGCCAAGAACTACGCCAAGGCCTTCCTGAGCAAGGACTGGAAGCAATACA
TCGACCCCTCCGTGGAGCATTCGGCGTCCGCAGACAAGGACGAGTGGCCA
TGGGCCGGGCCGGACCCCCTGCCGGAGAAGTACCTCAAGCAGGACATCCC
CGAAGAGTGGATGGTGGAGCCCCCCAAGGAGTGGTGGCTGGTCAAGCACC
CCAAGTGGGTCGCCAAGTTCGGAAAGGACTACGCGGAGAAGTACGTCCCG
GCCAACTACCGGTAAAGAGGGCGGGGGGCGTTGGAGAGAAAAAGGGGGAG
CTTGTGCCCGTCTCGGGCGCCGCGCTAGCCGGTGGAAGACTGCGGGAGCG
AAGGATAAAGATAGACGAAGAACGCGACTGACAGTGAGATGGGCACCACC
CTGTGAGATGGTGAGGTGGTGGAAAAGTGCTTGACAGGCGTGGGGTAGTG
TCAGGGAAAGCGGACGAAAGCTCAAAGCGAGGCTGCGAGCTGAGCTCATG
TGTAGTGTACGTCTTTCCTTTTTACCCCTGTTCTAATAAGGCATTAGTGG
TAATGGTCTGGGGTCGTAAGACATTATATTCGTAGAGAAAACAAAGATGG
TGACGTACCAAAACAGGAGCGGGGGTATTGAAAATTGTGTGCGTTTAGAT
GTTTGGATTTGAGTGCCCGTAGAGCTTCATGAGGTAACGCGGGTCCTATC
TCATCGTATTGGCTGATGTGTGACAATTTGATGCGGAAGATGCGAAATCT
TTTAACGTCCTAGAGCTGTTCGTGCGTCACGACGGCCAATATGCGGTGTA
CAACACCGAGAGAAAGCGAACCGCTTGCCAGAAAGAAAAAGTCTTGGCCA
GGAGCCACGGAGGCAGCCCTCTGATTGGGAAGTAGCGTCTATGTAATC back to topprotein sequence of rna5583 >rna5583-protein ID=rna5583-protein|Name=rna5583|organism=Nannochloropsis gaditana|type=polypeptide|length=444bp
MVKVLPFKAYRPPAALASTVAAPPYDVISSDEARRLADGKEDSFLRVNKP
EIDLPASLSSYDLRVYERGAKNLKEFISRGWLRKEAAPAYYIYSQRMGDH
IQHGICGACSVEEYATGVIKRHEKTQVKKENDRTRLTYTQNANVGPVFLM
YKPHDALDEIVRTVTSTRPAETSFVADDDGIEHLVWLVNDEPTVSSIRRA
FESIRFSYIADGHHRSASAFRVGEMKIKEAIAAGKNVTGDESFCLFLAVL
FPANQLKILEYNRIVKDLNGLTEDEFLSKVMENFEVSKSGGEEVKPDEGA
GNGGEPRPGGNKIVRPTVKGEVGMCLRGTWYRLKAREASVPKHDPVNSLD
VQVVYNHVLKAVLNIGDPREDERMKYVGGVRGLEELERLVTGERAWGAVA
FAMYPVSVEEVMDIADAEALMPPKATWFEPKLRSGLIVRLYDDS back to topmRNA from alignment at CM002466.1:340862..343431- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5583 ID=rna5583|Name=rna5583|organism=Nannochloropsis gaditana|type=mRNA|length=2570bp|location=Sequence derived from alignment at CM002466.1:340862..343431- (Nannochloropsis gaditana)
TGGATGTAGGGAGATGCCCCAAGAAAGTGAGCTTGATTGATAAGGAGAAT
CATGATGTTTGTCGATTACGGTCCTGGACGTGTCGCTCACGCGTGACAGG
CAGCGGATGGTCCCGAGCGGGCAGATGTTTCAATCATGAATAAATACAAA
CACTGTACACGTGGCATGCCTATTCCACCAAAGTAATCTTTACGCCGCAA
AGAGATGAGGCGGAGCCTGGTGCACGGCGATGGAGACGGCGAGGATCCTG
GGCGCAGATAGGTATTGAGTTTTTCCATCGCTCGTCTTGGCCCCTGCGCG
CCTCGCTCCTTCCTCTTCCTCCGTCTTGCCGCCTGCAGAACACGGCGCAT
TTCATGCTTTTGGGGAAGCCTTCAATCTTGTTTCACGGACGACCCACGTG
CCGAATGAGGACGTGACCGGGTAGCGTGTGGGGGAGCTACCGGTGATGTC
CGCGTCCGCGATACTCAGCTTTTCAGGGGATTGCCGAGATTCGCGACCGC
TCATCACACGAAGGTATCATCGACGCGCCGTTCGTATGTCTCTTCGCGGC
TTATATCTATCCGCGTGGGGCTGCGGGCACTTGTTTCAGTCACTATCGAG
CACGTTAAGTTGACGGTGTGCTTTCGAAACCAGATACTGCAAAGCAATGA
AACAATTAGTATTGGAGCGTTTGATGGGACCAAGTGGAAGCTGAACGGGA
GGAGCGGCTGTGTGGGGTTGGACAAGTGCTTTGTGTCATGGGCTAAAACC
GCTCGTCTTCCTAGCCATATAATGATCTTGTTAGCTCTCGTGCACGCTGT
ACTTTGTATTTTGGTTGCAATGCAATTGTAACCGTATAACACCACTTTGT
TCTCGTCGGAGTCAATCGAAATCGCAGCTTCCTCGCCCTGTCGTTCTCAC
GGGTTTCGGTATATATGTACTTATCTATGAAGCCCGGGGTGTACATGTCT
TCTCACAAGTTTCATTTCCCTTCAATACTTGCCATGCAGACACATCTTGC
GATTTGGCCTCTTCCACCTCCCCTCGTCGCATCGTATGGTCAAAGTGCTG
CCTTTCAAAGCCTACCGGCCCCCGGCCGCTCTGGCAAGCACAGTAGCTGC
CCCTCCTTACGACGTTATCTCCTCTGATGAGGCCCGTAGATTGGCGGATG
GCAAAGAGGACAGCTTTTTGCGCGTAAACAAACCAGAGATCGACTTGCCT
GCAAGTCTATCCTCTTATGACTTGCGGGTATACGAACGCGGCGCAAAAAA
TCTCAAGGAGTTCATCTCCCGAGGCTGGCTTCGCAAAGAAGCAGCCCCCG
CGTACTATATTTATTCCCAACGGATGGGTGATCACATTCAGCATGGGATA
TGCGGTGCATGTTCTGTGGAAGAGTACGCGACGGGGGTGATCAAACGCCA
CGAGAAGACGCAGGTGAAGAAGGAGAACGACCGGACCCGCCTGACCTACA
CGCAGAACGCCAACGTGGGGCCCGTCTTCCTCATGTACAAGCCCCACGAC
GCGCTGGACGAGATCGTGCGCACGGTCACAAGCACGCGTCCGGCGGAGAC
GTCGTTCGTGGCGGATGACGACGGCATTGAGCACTTGGTCTGGCTCGTGA
ACGACGAGCCTACGGTCAGCTCCATCCGCAGGGCTTTCGAGAGTATTCGC
TTCTCGTACATCGCCGACGGCCACCACCGCTCTGCCTCAGCGTTCCGCGT
GGGAGAGATGAAAATCAAAGAGGCGATTGCGGCGGGCAAGAACGTGACGG
GGGACGAGTCTTTCTGCCTCTTCTTGGCTGTCCTCTTCCCTGCCAACCAG
CTGAAGATACTAGAGTACAACCGTATTGTGAAGGACCTCAACGGCTTGAC
GGAGGATGAATTTTTGAGCAAAGTGATGGAGAACTTTGAGGTGTCGAAAT
CGGGAGGGGAAGAAGTGAAGCCAGACGAGGGGGCCGGCAATGGAGGAGAG
CCGCGTCCAGGAGGCAACAAGATCGTCCGACCAACGGTGAAAGGGGAGGT
GGGTATGTGTCTGCGGGGGACCTGGTATCGGCTAAAGGCGCGGGAGGCTT
CGGTCCCCAAGCACGACCCTGTGAACTCGCTGGACGTGCAAGTAGTCTAC
AACCACGTGCTTAAGGCGGTGCTGAACATCGGGGACCCCCGGGAAGACGA
GCGGATGAAGTACGTGGGAGGCGTGCGAGGTCTGGAGGAGCTGGAGCGGC
TTGTGACAGGAGAGAGGGCCTGGGGGGCCGTGGCCTTCGCCATGTATCCC
GTGTCGGTGGAGGAGGTTATGGACATCGCGGATGCAGAAGCCCTCATGCC
CCCAAAAGCAACCTGGTTCGAACCCAAACTACGATCGGGCTTGATCGTGA
GGTTGTACGACGACTCGTAAAGGAGACAGAGGGATGAATGTGATAAGTGA
GAGATTTGTCAGTCGCCATGCGTTGACCAACCAGAGTACACCGAGCTTGA
CAAACAGATCAGTCACACTAGGAAATGGAAATGCGCGATTTAGGTAAAAC
ACGCAAAATTTAAGAAACCAACCGCAAACAATGCACATGAAAAAGAAAAT
TTGCACAAGGAAAGATTACA back to topCoding sequence (CDS) from alignment at CM002466.1:340862..343431- >rna5583 ID=rna5583|Name=rna5583|organism=Nannochloropsis gaditana|type=CDS|length=1335bp|location=Sequence derived from alignment at CM002466.1:340862..343431- (Nannochloropsis gaditana)
ATGGTCAAAGTGCTGCCTTTCAAAGCCTACCGGCCCCCGGCCGCTCTGGC
AAGCACAGTAGCTGCCCCTCCTTACGACGTTATCTCCTCTGATGAGGCCC
GTAGATTGGCGGATGGCAAAGAGGACAGCTTTTTGCGCGTAAACAAACCA
GAGATCGACTTGCCTGCAAGTCTATCCTCTTATGACTTGCGGGTATACGA
ACGCGGCGCAAAAAATCTCAAGGAGTTCATCTCCCGAGGCTGGCTTCGCA
AAGAAGCAGCCCCCGCGTACTATATTTATTCCCAACGGATGGGTGATCAC
ATTCAGCATGGGATATGCGGTGCATGTTCTGTGGAAGAGTACGCGACGGG
GGTGATCAAACGCCACGAGAAGACGCAGGTGAAGAAGGAGAACGACCGGA
CCCGCCTGACCTACACGCAGAACGCCAACGTGGGGCCCGTCTTCCTCATG
TACAAGCCCCACGACGCGCTGGACGAGATCGTGCGCACGGTCACAAGCAC
GCGTCCGGCGGAGACGTCGTTCGTGGCGGATGACGACGGCATTGAGCACT
TGGTCTGGCTCGTGAACGACGAGCCTACGGTCAGCTCCATCCGCAGGGCT
TTCGAGAGTATTCGCTTCTCGTACATCGCCGACGGCCACCACCGCTCTGC
CTCAGCGTTCCGCGTGGGAGAGATGAAAATCAAAGAGGCGATTGCGGCGG
GCAAGAACGTGACGGGGGACGAGTCTTTCTGCCTCTTCTTGGCTGTCCTC
TTCCCTGCCAACCAGCTGAAGATACTAGAGTACAACCGTATTGTGAAGGA
CCTCAACGGCTTGACGGAGGATGAATTTTTGAGCAAAGTGATGGAGAACT
TTGAGGTGTCGAAATCGGGAGGGGAAGAAGTGAAGCCAGACGAGGGGGCC
GGCAATGGAGGAGAGCCGCGTCCAGGAGGCAACAAGATCGTCCGACCAAC
GGTGAAAGGGGAGGTGGGTATGTGTCTGCGGGGGACCTGGTATCGGCTAA
AGGCGCGGGAGGCTTCGGTCCCCAAGCACGACCCTGTGAACTCGCTGGAC
GTGCAAGTAGTCTACAACCACGTGCTTAAGGCGGTGCTGAACATCGGGGA
CCCCCGGGAAGACGAGCGGATGAAGTACGTGGGAGGCGTGCGAGGTCTGG
AGGAGCTGGAGCGGCTTGTGACAGGAGAGAGGGCCTGGGGGGCCGTGGCC
TTCGCCATGTATCCCGTGTCGGTGGAGGAGGTTATGGACATCGCGGATGC
AGAAGCCCTCATGCCCCCAAAAGCAACCTGGTTCGAACCCAAACTACGAT
CGGGCTTGATCGTGAGGTTGTACGACGACTCGTAA back to top
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