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Properties
| Property Name | Value |
|---|
| Product | phosphoenolpyruvate carboxylase |
| Orig transcript id | gnl|cribi|Naga_100016g66.2961.mrna |
| Orig protein id | gnl|cribi|Naga_100016g66.2961 |
| Gene | PPC |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:248689..252355 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5543 ID=rna5543|Name=rna5543|organism=Nannochloropsis gaditana|type=mRNA|length=1916bp
ACTCTTGGCAATTTAGTCGCCTTGGGCTGCACCACCGACCGCCTTCGTCA
CGTTCAAGAGAGTCACCTTTGATAGTGAAGCATCACTGTCCCACCTTATT
ATAAGCGCGTGATTCTTTGGTGTCAGCACGTTCACCTCCTCACCCTGCTC
CACCTCATTTCTCATCCGATCATCCTGCTTGCTTCTCAGGTGGGAGCCGA
AGCAGGAAAAACCCAGCCATTCCTAAGTGATACAAGCCATAGGAATAATG
GCGTCTGCTGGACAGCAAAGCGCAGATGGCAACCGTGCCGTTGACACATG
GAAGGTCAAAAAACTTATTAAATCTCTGCAACAGGCAAAGGGGAACGGGA
CATCGATGATCTCCTTGATCATTCCTCCGCGAGACCAGATATCTCGCGTG
AACAAAATGCTGGCCGACGAGTATGGGACGGCCACCAACATCAAGTCCCG
CACCAATCGCCTTTCAGTGTTGGACGCGATCACATCCACGCAACAGCGTC
TGAAACTCTACAGCAAGGTCCCGCCCAACGGCCTGGTCATGTACTGCGGG
ACGATCATGACGGACGAAGGCAAAGAGCGTCGCATTACTATCGACTTTGA
ACCCTTCAAGCCCATCAACACATCCTTATATTTGTGCGACAACAAGTTCC
ACACGGAGGCCCTGGGAGAGCTTCTGGAGGACGACGACAAGTTCGGCTTT
ATCATCATGGACGGAAACGGATCGCTATACGGGACCCTGCAGGGGAATAC
GCGCACAGTCCTACACAAGTTCTCCGTTGACTTGCCTAAGAAGCATGGAA
GAGGGGGTCAGTCCGCGGTTCGATTCGCACGGTTGCGAATGGAAGCTCGA
CACAACTACGTGCGCAAGGTGGCAGAACTCGCGGTCCACTACTTCATCAC
GGACAATAAGGCCAACGTCGTCGGCCTTGTCATGGCGGGGTCTGCAGATT
TCAAGACTGAGCTGCAGCTCTCGGATCTTTTTGATCCTCGACTACTAAAG
GTTGTGCTCAAGACTGTTGATGTCTCCTACGGGGGGGAGAACGGATTTAA
TCAAGCCATCGAGCTTGCTGCTGAAACGCTAGGCTCTGTGAAACTGGTCC
AAGAGAAGAAATTGTTGCAGAAATATTTTGACGAGATAAGTCAGGACACG
GGCAAATACTGCTTCATGGTTGACGATACACTGAAGGGGTTGGAGTTGGG
GGCCGTAGAGACCTTAATTGTTTGGGAAGGACTAGAAACGATGCGCTATG
TTGTCCGTGATAACACCACGGGCGAAGAGCGGGTATTGCATGTGGGCAAG
GAGCAATACGCAAATGGAGCGAGTGGAGATAACACGCACTTGCGGGACGC
CAAAACGGGTAGGGAGCTAGAGGTGGTAGACAAAATATCGTTGGTAGAGT
GGTTTGCGGACAACTACACCAAATTTGGTACGCAGTTAGAATTTGTGACG
AATCGATCACAAGAAGGAAATCAGTTTTGCAAAGGTTTTGGAGGCGTAGG
CGGATTACTACGGTGGAAGGTCGATTTTGCGGAGCACAGCGAAGAGACGT
ACGCGGACATGGGCGAAGACTCGGACGAGGAGGGAGGAGCGACCGAGGAG
GATTACGAAGATCCTTTTTGATGTGCTAGCCAGGGTGTCTTGATCCAAGG
CAAAGTTTGAAGCTTTTCTCTCAGAGAAAAATGTGTTGGCTGTAGCTTAA
AAAAATTTGGCATGAAATTGGCACAGAGAAAAGAGCAAACAGCAAGGTAT
TATAAGTGAAGTAAGCGGTTGAAGGTAGGAGATACAGAGAAGACAACAGG
TCTCTGGAGTACGAACAACCAAAGAAAGAAAGCACTTAGACTTGGGATGG
CTTTAGTATGTGTCCTCTAAAGATTTCACATGCCCTTGACGCTCGCTTTT
CTTGCATGGCAATGGA back to topprotein sequence of rna5543 >rna5543-protein ID=rna5543-protein|Name=rna5543|organism=Nannochloropsis gaditana|type=polypeptide|length=961bp
MMLRVGSLVPCAVRRPVQAHLFALRSSQRALSSSLGGGGLSKLQTSGAEG
ELHSTHEQHAMLRSDVKSLGRMLGHAISVHSGDDIFQKVERLRRLAKEWR
DGDKGALHALNKEVAQFTGEEHYHVSRAFANFLALANTAETHNKVRRLRD
ELSATTAVLPLPFREDACLGNIERLLKQEKVSREKIYEAITSQKIELVLT
AHPTEVNRRTYLNKHKKVAMAMEQLHFHGKLTPYEKAEVEESLKREITSI
WNSEMIRRTKPTPVDEARSGLAVVEQVLWDAVPSFLRKLDATVQMTLGKR
LPITAAPVCFASWMGGDRDGNPFVTPQITRTVALRARWQAMRLLIRDIRE
LKMVLSSTKCSEELRIVVGKDAREPYRDVVKEIEEDVEATIESINDLFAS
DGTLAATEIPELPIMTTSQVLDKLLLLHRSLCETQQGLIADGLLTDTIRR
LKCFGVTLLPLDVRQESTVHTETLDAVTRYLGLGSYAQWDEETRMSWLNT
ELTAKRPLLPKEQPLASNKDFTFSAAVVDCLETFRMIAGMGEESLGAYVI
SMAKAPSDVLAVKLLMKEFGLKRNMRVVPLFETLDDLNQSEVTMATLFSH
PWYRGHIQGKQEIMIGYSDSSKDAGRLAALWAQYEAQERLANLGSKHDVE
LTFFHGKGGTVSRGGNPCMYKALIGMPPNTLNGRFRVTEQGEMITQNFGH
RAVAEATLDLYNAGVLAEFFQEPVNPPEAWRQVMKELSSIGCEHYRATVR
QDPRFVPYFRAATPEQELGSANIGSRPQKRRPGGVETLRAIPWVFSWTQT
RLHLSAWLGVGEALEAVMASPEHASTLAEMYKHWPFLHTNMDLVDMILAK
ADKEIAENYDHLLVSDPEQKKLGIELRAKLEDTTKAVLKLSGEQKLQQYN
PVLQWAIVLRNAYVDPLNILQAHVLKRLRTEEYKSEDEKQRLQDALVVTI
NGISAGMRNSG back to topmRNA from alignment at CM002466.1:248689..252355- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5543 ID=rna5543|Name=rna5543|organism=Nannochloropsis gaditana|type=mRNA|length=3667bp|location=Sequence derived from alignment at CM002466.1:248689..252355- (Nannochloropsis gaditana)
CTGTGTGTCACCAACTGGTCAGGACATGCGGATCATATATACCATTATAA
TCGCCGCTTTTGTTCTCGTCTTCTGTGAGCGTTCCTCCCCCGCCCGCAGA
GTCTTCGTACGTGCCCCAGACCTCAGCCCACTTTGCACGCTGCAACGGGG
TAGTCACCGATTGTCAGCTGGTCTCAAGTGCGGTCTTTTAAGTCTTGACG
TAATAACGGGGGCGGCTGGAGGCAGGGTCGTGAGGAACAGACTCTAACCC
TGGATTGGGGCGGGGATTGCGAGACTTCCACCGAGGGTATATATCCTCCC
TTGCATTTGACCGCACTTTGTCCTTTGGCGTTCAGATTTCTATCCATATC
ATCTGCACCCTATCCACCTCACCGACTTTCGCTTGCAACTACACTGTTTT
CAACAGATTCTCCCGCGCCTCCCGCGCAAATTTTGCCTTTTTGGTTGTGT
CTTCCCGGTGCTGGGCAATTTTATGATGCTGCGCGTCGGATCCCTCGTCC
CATGCGCTGTCCGACGACCCGTGCAGGCTCACCTTTTTGCACTCAGATCC
TCGCAGCGAGCCTTGAGTTCCAGTCTTGGCGGCGGGGGCTTGTCAAAACT
GCAGACGTCTGGTGCTGAGGGGGAGTTACATTCCACGCACGAGCAACATG
CTATGCTGCGTTCGGACGTCAAATCTTTGGGGCGCATGTTGGGCCATGCA
ATATCCGTGCACTCGGGAGACGATATTTTCCAGAAAGTTGAGCGCTTGCG
CCGATTGGCCAAGGAATGGCGGGACGGGGATAAGGGAGCTTTGCACGCTC
TCAATAAGGAGGTAGCTCAGTTCACGGGCGAAGAACATTATCATGTGTCC
CGCGCGTTCGCCAACTTCTTGGCCTTGGCCAACACAGCCGAGACTCACAA
CAAGGTGCGGAGGCTTAGGGACGAGCTTTCGGCTACAACAGCGGTGTTAC
CTCTGCCATTCCGGGAGGACGCGTGCCTGGGCAACATCGAGCGTCTGCTG
AAACAAGAAAAGGTCTCCCGCGAAAAGATCTATGAAGCCATTACTTCGCA
GAAAATTGAGCTCGTCTTGACTGCTCATCCGACTGAGGTGAATCGGCGTA
CATACTTGAATAAGCACAAGAAAGTGGCCATGGCCATGGAGCAGCTGCAC
TTTCATGGCAAACTCACTCCATACGAGAAAGCGGAGGTCGAAGAGAGTCT
AAAGCGCGAGATTACGTCAATCTGGAATTCAGAAATGATTCGACGTACTA
AACCTACGCCTGTTGATGAAGCCCGCAGCGGGCTGGCTGTCGTGGAGCAG
GTCCTGTGGGACGCAGTGCCGTCCTTTTTGCGCAAGCTGGATGCTACCGT
GCAGATGACGCTCGGCAAGCGCCTGCCCATCACGGCCGCACCGGTGTGCT
TCGCCTCTTGGATGGGCGGCGACCGAGACGGAAATCCCTTCGTCACTCCT
CAGATTACCCGCACTGTAGCCCTACGGGCACGCTGGCAGGCGATGCGTTT
GCTCATCCGCGACATCCGGGAGCTTAAAATGGTCCTCTCCTCCACCAAGT
GCTCCGAAGAGCTGAGAATCGTAGTGGGGAAGGATGCCCGGGAGCCTTAT
CGAGACGTGGTCAAGGAGATAGAGGAGGATGTGGAGGCGACAATAGAATC
CATCAACGACTTGTTCGCGTCCGACGGCACGCTTGCCGCGACCGAAATCC
CCGAGCTGCCCATCATGACCACGTCCCAGGTTTTGGACAAGCTTCTTCTC
CTGCACCGCTCGTTGTGTGAGACTCAGCAGGGCCTCATCGCCGACGGGCT
CCTGACCGACACCATCCGCCGGCTCAAGTGCTTCGGGGTGACGCTGCTCC
CTCTCGACGTCCGACAGGAGTCGACGGTGCACACGGAGACGCTCGACGCA
GTCACGCGCTACCTCGGCCTAGGTTCATATGCGCAGTGGGACGAGGAGAC
CCGCATGTCGTGGCTGAACACCGAGCTGACGGCCAAGCGACCGCTCCTCC
CGAAGGAGCAGCCACTCGCCTCCAACAAGGATTTCACTTTCTCGGCCGCC
GTCGTGGACTGCCTGGAGACGTTCCGCATGATCGCAGGCATGGGGGAAGA
GTCCCTTGGGGCCTACGTCATCTCTATGGCTAAAGCACCGTCCGATGTTC
TGGCCGTCAAGCTTCTCATGAAGGAATTTGGTTTGAAGCGGAACATGCGT
GTGGTGCCCCTCTTTGAAACTCTCGACGACCTGAACCAGTCAGAGGTCAC
GATGGCAACACTTTTTTCTCATCCTTGGTACCGGGGCCATATACAGGGCA
AACAGGAGATCATGATTGGATACTCAGACTCCTCCAAGGACGCAGGCCGT
CTTGCCGCGCTCTGGGCGCAGTACGAAGCGCAAGAACGCTTGGCCAACTT
GGGCAGCAAACATGATGTGGAGCTCACATTTTTCCACGGCAAGGGGGGAA
CCGTGTCGCGCGGCGGAAACCCATGTATGTACAAGGCCCTAATTGGCATG
CCACCCAACACGCTTAATGGTCGGTTCCGCGTGACGGAGCAAGGAGAAAT
GATCACGCAGAATTTTGGTCACCGCGCCGTCGCCGAAGCCACGCTCGACT
TGTACAACGCCGGGGTATTGGCTGAGTTCTTTCAGGAACCGGTCAATCCT
CCAGAGGCCTGGCGCCAGGTCATGAAGGAGCTCTCAAGCATTGGATGCGA
GCACTACAGGGCTACTGTGCGTCAGGACCCGCGCTTCGTTCCCTATTTCC
GAGCGGCCACTCCCGAGCAAGAGCTTGGCTCCGCAAATATCGGCTCAAGA
CCGCAAAAGCGGCGGCCAGGAGGCGTGGAGACGCTGCGGGCTATCCCTTG
GGTATTCTCGTGGACTCAGACCCGCCTCCATCTATCGGCCTGGCTTGGGG
TCGGAGAAGCATTGGAGGCGGTCATGGCCTCGCCAGAGCATGCATCCACT
CTGGCGGAAATGTACAAACATTGGCCATTTCTTCACACCAATATGGACTT
AGTCGACATGATTTTGGCGAAGGCCGACAAAGAAATAGCCGAGAACTACG
ATCATCTTTTAGTCTCTGATCCAGAGCAGAAGAAGCTTGGAATCGAGCTG
CGCGCCAAATTGGAAGACACCACAAAAGCAGTTCTCAAGCTTTCGGGGGA
ACAGAAGCTTCAACAGTACAACCCCGTGCTCCAATGGGCGATTGTATTGC
GCAATGCTTATGTAGACCCGCTCAATATCTTGCAGGCTCATGTTTTGAAG
CGTCTACGCACTGAGGAGTACAAATCCGAAGATGAGAAACAGAGGCTCCA
GGATGCCTTAGTGGTGACTATTAATGGAATCTCAGCAGGTATGCGTAACA
GTGGGTGATCGTGATATATATGTATGGTAAGTAATGGAAAAGCGATGGCT
TGAGAAGCATGGATGAGAGGTTTTGTGTATATCTATGTTAAGTCTCACGA
GACTGATGGCGAATTGGAGGATTTAATGCTACCTTTGCAGTGTAGCACTT
ACCGGTGCAGAAACTGAGATGAGAAATCGACAAGGATGCGTACCTATATA
TGAAGTTAAAGAAATTGAGCTCTTGACTTGGAAAAAAAAAAGGTTCTATG
AGTGATTGAAAACGGTCAACATTTTCTTTCCTTGATCCCATGTCATATAT
CACGCCCCTTACACTGT back to topCoding sequence (CDS) from alignment at CM002466.1:248689..252355- >rna5543 ID=rna5543|Name=rna5543|organism=Nannochloropsis gaditana|type=CDS|length=2886bp|location=Sequence derived from alignment at CM002466.1:248689..252355- (Nannochloropsis gaditana)
ATGATGCTGCGCGTCGGATCCCTCGTCCCATGCGCTGTCCGACGACCCGT
GCAGGCTCACCTTTTTGCACTCAGATCCTCGCAGCGAGCCTTGAGTTCCA
GTCTTGGCGGCGGGGGCTTGTCAAAACTGCAGACGTCTGGTGCTGAGGGG
GAGTTACATTCCACGCACGAGCAACATGCTATGCTGCGTTCGGACGTCAA
ATCTTTGGGGCGCATGTTGGGCCATGCAATATCCGTGCACTCGGGAGACG
ATATTTTCCAGAAAGTTGAGCGCTTGCGCCGATTGGCCAAGGAATGGCGG
GACGGGGATAAGGGAGCTTTGCACGCTCTCAATAAGGAGGTAGCTCAGTT
CACGGGCGAAGAACATTATCATGTGTCCCGCGCGTTCGCCAACTTCTTGG
CCTTGGCCAACACAGCCGAGACTCACAACAAGGTGCGGAGGCTTAGGGAC
GAGCTTTCGGCTACAACAGCGGTGTTACCTCTGCCATTCCGGGAGGACGC
GTGCCTGGGCAACATCGAGCGTCTGCTGAAACAAGAAAAGGTCTCCCGCG
AAAAGATCTATGAAGCCATTACTTCGCAGAAAATTGAGCTCGTCTTGACT
GCTCATCCGACTGAGGTGAATCGGCGTACATACTTGAATAAGCACAAGAA
AGTGGCCATGGCCATGGAGCAGCTGCACTTTCATGGCAAACTCACTCCAT
ACGAGAAAGCGGAGGTCGAAGAGAGTCTAAAGCGCGAGATTACGTCAATC
TGGAATTCAGAAATGATTCGACGTACTAAACCTACGCCTGTTGATGAAGC
CCGCAGCGGGCTGGCTGTCGTGGAGCAGGTCCTGTGGGACGCAGTGCCGT
CCTTTTTGCGCAAGCTGGATGCTACCGTGCAGATGACGCTCGGCAAGCGC
CTGCCCATCACGGCCGCACCGGTGTGCTTCGCCTCTTGGATGGGCGGCGA
CCGAGACGGAAATCCCTTCGTCACTCCTCAGATTACCCGCACTGTAGCCC
TACGGGCACGCTGGCAGGCGATGCGTTTGCTCATCCGCGACATCCGGGAG
CTTAAAATGGTCCTCTCCTCCACCAAGTGCTCCGAAGAGCTGAGAATCGT
AGTGGGGAAGGATGCCCGGGAGCCTTATCGAGACGTGGTCAAGGAGATAG
AGGAGGATGTGGAGGCGACAATAGAATCCATCAACGACTTGTTCGCGTCC
GACGGCACGCTTGCCGCGACCGAAATCCCCGAGCTGCCCATCATGACCAC
GTCCCAGGTTTTGGACAAGCTTCTTCTCCTGCACCGCTCGTTGTGTGAGA
CTCAGCAGGGCCTCATCGCCGACGGGCTCCTGACCGACACCATCCGCCGG
CTCAAGTGCTTCGGGGTGACGCTGCTCCCTCTCGACGTCCGACAGGAGTC
GACGGTGCACACGGAGACGCTCGACGCAGTCACGCGCTACCTCGGCCTAG
GTTCATATGCGCAGTGGGACGAGGAGACCCGCATGTCGTGGCTGAACACC
GAGCTGACGGCCAAGCGACCGCTCCTCCCGAAGGAGCAGCCACTCGCCTC
CAACAAGGATTTCACTTTCTCGGCCGCCGTCGTGGACTGCCTGGAGACGT
TCCGCATGATCGCAGGCATGGGGGAAGAGTCCCTTGGGGCCTACGTCATC
TCTATGGCTAAAGCACCGTCCGATGTTCTGGCCGTCAAGCTTCTCATGAA
GGAATTTGGTTTGAAGCGGAACATGCGTGTGGTGCCCCTCTTTGAAACTC
TCGACGACCTGAACCAGTCAGAGGTCACGATGGCAACACTTTTTTCTCAT
CCTTGGTACCGGGGCCATATACAGGGCAAACAGGAGATCATGATTGGATA
CTCAGACTCCTCCAAGGACGCAGGCCGTCTTGCCGCGCTCTGGGCGCAGT
ACGAAGCGCAAGAACGCTTGGCCAACTTGGGCAGCAAACATGATGTGGAG
CTCACATTTTTCCACGGCAAGGGGGGAACCGTGTCGCGCGGCGGAAACCC
ATGTATGTACAAGGCCCTAATTGGCATGCCACCCAACACGCTTAATGGTC
GGTTCCGCGTGACGGAGCAAGGAGAAATGATCACGCAGAATTTTGGTCAC
CGCGCCGTCGCCGAAGCCACGCTCGACTTGTACAACGCCGGGGTATTGGC
TGAGTTCTTTCAGGAACCGGTCAATCCTCCAGAGGCCTGGCGCCAGGTCA
TGAAGGAGCTCTCAAGCATTGGATGCGAGCACTACAGGGCTACTGTGCGT
CAGGACCCGCGCTTCGTTCCCTATTTCCGAGCGGCCACTCCCGAGCAAGA
GCTTGGCTCCGCAAATATCGGCTCAAGACCGCAAAAGCGGCGGCCAGGAG
GCGTGGAGACGCTGCGGGCTATCCCTTGGGTATTCTCGTGGACTCAGACC
CGCCTCCATCTATCGGCCTGGCTTGGGGTCGGAGAAGCATTGGAGGCGGT
CATGGCCTCGCCAGAGCATGCATCCACTCTGGCGGAAATGTACAAACATT
GGCCATTTCTTCACACCAATATGGACTTAGTCGACATGATTTTGGCGAAG
GCCGACAAAGAAATAGCCGAGAACTACGATCATCTTTTAGTCTCTGATCC
AGAGCAGAAGAAGCTTGGAATCGAGCTGCGCGCCAAATTGGAAGACACCA
CAAAAGCAGTTCTCAAGCTTTCGGGGGAACAGAAGCTTCAACAGTACAAC
CCCGTGCTCCAATGGGCGATTGTATTGCGCAATGCTTATGTAGACCCGCT
CAATATCTTGCAGGCTCATGTTTTGAAGCGTCTACGCACTGAGGAGTACA
AATCCGAAGATGAGAAACAGAGGCTCCAGGATGCCTTAGTGGTGACTATT
AATGGAATCTCAGCAGGTATGCGTAACAGTGGGTGA back to top
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