PPC, gene5356 (gene) Nannochloropsis gaditana

Overview
NamePPC
Unique Namegene5356
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:248689..252355 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100016g66
Gene biotypeprotein_coding
GenePPC
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:248689..252355 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G00760NO11G00760Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5543rna5543-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5543rna5543Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5543

>rna5543-protein ID=rna5543-protein|Name=rna5543|organism=Nannochloropsis gaditana|type=polypeptide|length=961bp
MMLRVGSLVPCAVRRPVQAHLFALRSSQRALSSSLGGGGLSKLQTSGAEG
ELHSTHEQHAMLRSDVKSLGRMLGHAISVHSGDDIFQKVERLRRLAKEWR
DGDKGALHALNKEVAQFTGEEHYHVSRAFANFLALANTAETHNKVRRLRD
ELSATTAVLPLPFREDACLGNIERLLKQEKVSREKIYEAITSQKIELVLT
AHPTEVNRRTYLNKHKKVAMAMEQLHFHGKLTPYEKAEVEESLKREITSI
WNSEMIRRTKPTPVDEARSGLAVVEQVLWDAVPSFLRKLDATVQMTLGKR
LPITAAPVCFASWMGGDRDGNPFVTPQITRTVALRARWQAMRLLIRDIRE
LKMVLSSTKCSEELRIVVGKDAREPYRDVVKEIEEDVEATIESINDLFAS
DGTLAATEIPELPIMTTSQVLDKLLLLHRSLCETQQGLIADGLLTDTIRR
LKCFGVTLLPLDVRQESTVHTETLDAVTRYLGLGSYAQWDEETRMSWLNT
ELTAKRPLLPKEQPLASNKDFTFSAAVVDCLETFRMIAGMGEESLGAYVI
SMAKAPSDVLAVKLLMKEFGLKRNMRVVPLFETLDDLNQSEVTMATLFSH
PWYRGHIQGKQEIMIGYSDSSKDAGRLAALWAQYEAQERLANLGSKHDVE
LTFFHGKGGTVSRGGNPCMYKALIGMPPNTLNGRFRVTEQGEMITQNFGH
RAVAEATLDLYNAGVLAEFFQEPVNPPEAWRQVMKELSSIGCEHYRATVR
QDPRFVPYFRAATPEQELGSANIGSRPQKRRPGGVETLRAIPWVFSWTQT
RLHLSAWLGVGEALEAVMASPEHASTLAEMYKHWPFLHTNMDLVDMILAK
ADKEIAENYDHLLVSDPEQKKLGIELRAKLEDTTKAVLKLSGEQKLQQYN
PVLQWAIVLRNAYVDPLNILQAHVLKRLRTEEYKSEDEKQRLQDALVVTI
NGISAGMRNSG
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Synonyms
Publications