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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_102904g1.5845.mrna |
| Orig protein id | gnl|cribi|Naga_102904g1.5845 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1378498..1379007 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna554 ID=rna554|Name=rna554|organism=Nannochloropsis gaditana|type=mRNA|length=1219bp
GGCATGCACGATCGGCCGTTGCTGGTATACGCACCATCTCGAGCTCTCTT
TGTCGTCCTCACAGGATCTTTTTTGCTGTACCAAGCCCTTGGCGCCGCCG
TCTTACTTACGAGGACATATCCCTTTGGCGTCAAATATCACGATTCAAGA
CCATCGTACGGTCGATCAAGCTTCGTCAACCCACCCATGTTATCGTCGCT
CCGTCCATTGCTGCACAGTGGACAAATTTTGTCCGGCTCTATTAAACGTA
GTCTATTGCGATCGTTAAAACGCTCCCCCTTTCACCGGCCCGGCTTGACC
GGCCTGATAGTGACAGGCATGGGGACGCTCGCGGCAGCCGGAACCTCCTC
CCCCCCGGCCTCCTCATGCTCCACCACTCCCGCCCTGCCCCCTTGCGCCC
GTGTCATCCCCGTTCCTATTCTCAGCGACAATTTTGCTTACTTGGTTGTG
GACCCTCAAACCGGAAAAGCTGCGTGTGTCGATCCTGCCGAGCCAGCGAA
GGTCCTGGCGGCCGCCCAACGCGAAGGCATTAAGCTGTCCACCCTCCTTT
GCACGCACAAACACTGGGATCACGCAGGCGGTAACGAAGAAATGGCGCGC
ATGCTGCCCGGTTTGGAGGTGGTGACGACCAAGTTTGAGGACATCCCTGC
CGCCACCATCCGCTTGGGCGACGACGATGTCTACACGCTTGGATCCCTGA
GCGTGCGTGCTCTCTACACACCCTGCCACACCAAAGGCCACGTGCTGTTT
CTCGTGACGCCACAGGACGAGGCAGGGCCGGGGACGAGCCCGACGGCCCC
TGTCCTTTTCTCGGGCGACACATTGTTCGTGGGAGGCTGCGGCCGGTTTT
TCGAAGGCGACGGCGCGCAGATGGTGGAGGCGCTTATGGGCCGCGTTGCC
AGCCTCTCCCCCGAGACCCTGGTCTATTGCGGGCACGAATATACCCAATC
CAACCTGGCCTTTGCCATGTCGGTGGAGCCTGAAAATGCTGCCCTTCGCG
CCAAAATCGCTGTTGCCACGGCTGCCCTGCGCTCAGGACAGCCGACCGTC
CCCTCCACGGTAGGGAGCGAGCTGGAGATTAACCCCTTCATGCGTGTGGG
GGAGGCCGCGGTGATAAAGGCCGCGAGGGAGAAAGGGGGGGCGGCGGGGG
AGGATCCAGTCAGTGTGATGACGGCATTGCGGGAAATGAAGAATATTTTC
AAAGGTTGATGGGGGAGGG back to topprotein sequence of rna554 >rna554-protein ID=rna554-protein|Name=rna554|organism=Nannochloropsis gaditana|type=polypeptide|length=106bp
RRGRNGCPWSVTTIHSGAYMQCCLCCGLWDPEKGTEGGRKGGQKWKVQRR
KDVRTWTGCLCTLHVQKSEEDPERRGGIEPGERWSTLRDGRLDCQARLPA
RRLHDL back to topmRNA from alignment at CM002455.1:1378498..1379007- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna554 ID=rna554|Name=rna554|organism=Nannochloropsis gaditana|type=mRNA|length=510bp|location=Sequence derived from alignment at CM002455.1:1378498..1379007- (Nannochloropsis gaditana)
AGGAGGGGGAGGAATGGCTGTCCATGGTCGGTCACTACGATTCACTCAGG
AGCTTACATGCAGTGCTGTCTCTGCTGCGGGCTCTGGGACCCTGAGAAAG
GGACGGAGGGGGGAAGGAAGGGAGGGCAAAAGTGGAAAGTGCAGAGAAGG
AAAGATGTCAGAACATGGACAGGCTGTTTGTGCACACTTCATGTACAGAA
GAGCGAGGAAGACCCAGAAAGAAGGGGAGGCATAGAACCAGGGGAGAGGT
GGTCGACACTTAGGGATGGTCGGCTGGACTGTCAGGCACGCCTACCTGCA
CGGCGACTCCACGACTTGTGACACCACGACCCGACCTTTTCCGCTTGACA
TGTACGCAATATTCCAAATATTTAAAAAAACGAAGTCTCCGCCTCAATCC
GAGAAGGGAGGGAAATGACACGCGTTGCATTTAGGATAGGATATATGGGA
GTGCTGGAGACGCAAAAGACAACGCAGTTTCCGCCTTCTAGGACTTGTAA
ACGTCAAAGC back to topCoding sequence (CDS) from alignment at CM002455.1:1378498..1379007- >rna554 ID=rna554|Name=rna554|organism=Nannochloropsis gaditana|type=CDS|length=321bp|location=Sequence derived from alignment at CM002455.1:1378498..1379007- (Nannochloropsis gaditana)
AGGAGGGGGAGGAATGGCTGTCCATGGTCGGTCACTACGATTCACTCAGG
AGCTTACATGCAGTGCTGTCTCTGCTGCGGGCTCTGGGACCCTGAGAAAG
GGACGGAGGGGGGAAGGAAGGGAGGGCAAAAGTGGAAAGTGCAGAGAAGG
AAAGATGTCAGAACATGGACAGGCTGTTTGTGCACACTTCATGTACAGAA
GAGCGAGGAAGACCCAGAAAGAAGGGGAGGCATAGAACCAGGGGAGAGGT
GGTCGACACTTAGGGATGGTCGGCTGGACTGTCAGGCACGCCTACCTGCA
CGGCGACTCCACGACTTGTGA back to top
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