EWM30119.1, cds554 (CDS) Nannochloropsis gaditana

Overview
NameEWM30119.1
Unique Namecds554
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1378687..1379007 -

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Properties
Property NameValue
Protein idEWM30119.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102904g1.5845.mrna
GbkeyCDS
End range.
End range1379007
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1378687..1379007 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30119.1 vs. NCBI_GenBank
Match: gi|585112767|gb|EWM30119.1| (hypothetical protein Naga_102904g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 213.772 bits (543), Expect = 3.316e-70
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 
Query:    1 RRGRNGCPWSVTTIHSGAYMQCCLCCGLWDPEKGTEGGRKGGQKWKVQRRKDVRTWTGCLCTLHVQKSEEDPERRGGIEPGERWSTLRDGRLDCQARLPARRLHDL 106
            RRGRNGCPWSVTTIHSGAYMQCCLCCGLWDPEKGTEGGRKGGQKWKVQRRKDVRTWTGCLCTLHVQKSEEDPERRGGIEPGERWSTLRDGRLDCQARLPARRLHDL
Sbjct:    1 RRGRNGCPWSVTTIHSGAYMQCCLCCGLWDPEKGTEGGRKGGQKWKVQRRKDVRTWTGCLCTLHVQKSEEDPERRGGIEPGERWSTLRDGRLDCQARLPARRLHDL 106
The following BLAST results are available for this feature:
BLAST of EWM30119.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112767|gb|EWM30119.1|3.316e-70100.00hypothetical protein Naga_102904g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna554rna554Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications