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Properties
| Property Name | Value |
|---|
| Product | lipase family protein |
| Orig transcript id | gnl|cribi|Naga_100016g73.2966.mrna |
| Orig protein id | gnl|cribi|Naga_100016g73.2966 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:233546..235469 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5536 ID=rna5536|Name=rna5536|organism=Nannochloropsis gaditana|type=mRNA|length=1871bp
CTCAGCCGCTCGCGTTGATCCCGGCGATGCATTTAAGGTCGAAGTCCCAG
CATGCCAGGAAACACAAACCACGAAGTGAGGGTGCACCACAGGGATCATT
CGGAAGAGTGATTGATATAGAGGGCGATTTGCTACATCGTGCAATAAGTG
GGACCTTTTCCTGCAGTCCGCTCCATCGTTTCGTGCTTTTGGGCTCAGCC
TCACGGTCACTTAAACGTTCGTCTCTTGGGCCCACAAGTGCGCCACTGTT
CCTGAATCATGGCGCCAAATGATACGAAGACATGCTCATTTCATTTTCTG
AATGGATGGCATCCTGCGTCATTTAGGAAGCAAGATAACGCCTTACTTTA
TGAAATGACTTCTCCCCCTGCTTTCCTCAGGGCTCCTGCAGCAAGAACCA
TGGCGAGTGGCGGAGTCGGATCCAAAGAGAAGACCGTAAAGCCTCTAGGC
TGGATATGGTTCACGGGGATTGTGTTGGGCATAGCAGCGTGCCTTCCATA
CGTGGTCGAATTTATGTGCTCGAAGGCATACGCGACGCATCGGCACGGTG
TGGTGTTGGTAACGGATGCTACGTCGCCCGTGGGAAAAGCTACATGTCTT
GCTTTAATGGAAGATGGTTATGCGGTATACGGCGGAGTACGGAGTGCGTC
AGACGAGCGCGTGGTCACAGAGCTCGACTCGAGGAAGCTTCTGCCCGTGG
TGCTTGACATGCAGAACCCGGGCACCGTGGAAGCCGCGGTCGCCAAGGTC
AAGTCGGAGCTTCAGGGACGACCGTTTACTGCACTTGTCAATACCATAGA
CGCTGGGGGCGCTATCAGCCCGATTGAGAGCCAAGACTTGTCATCTTTAA
AGCGCCTTTTTGATATCAACACCTTCGGCACGCTAGCGGTGGTGCAAGCT
TTCCTCCCTCTCATTCGCGAGCATGGCAGCCGTCTCGTTCTCATGTCCTC
ACTCTGTGCTCACCTGACATCGCCCTTATTCGGAGGCCTGTGTGCGAGCA
AAGCTGCCCTCGAGTCCTTGGCGGACGCCCTCAGAAGAGAACTCGCCCAC
TACCGAATCTCGGTCTCGTCCATCGAACCGGCCGTGGCTTTCCCAGAGAT
GCCCGAGGGAGGGAAGGACACTGGGGCCAAATCGGCAGCAGCGGTAGAGC
TAGACAGTAAAGTCTACGCCCACTTGTTTGCTGACGACAAAGCTCGGGCC
CTAGTCTCTCCCAGTGCCAATGGAGGAGAGGGAAGACGCTCTGGGACAGC
TGTGGCGGAAGCTGTCGCGCAGGTCGTGATTCATGCAGTGTCAAGCACAC
ACCCGAAGCTCCGTTATCCTGCCGGATACATAGGCCACCTTCCCGCGAGT
GTGGCCGCCTTTATCTCGTGGGGCCTACCAGGGCGCATGCAAGATCTGCT
CTTGGCATGAGGAACCTGAGGAGAAGGGGAGGCTCGAGCGAGAGAAACAA
CGAGGGCGGTTCAGCCGAATGAGACAGACAGAACATCCGGGGGAAGAGGG
AATGGGTACACAAGGAGAAGGGAAAACGTGGTGAGGGAAAGGCCAGGTCA
GCTTCAGCTTGAAACCACCACTTGCTTGTGCTATGAGTTGTGTCACGTGT
TTCTTTTTGCATGAAGGAGGTTTTATACAAACTGTTTAGGCTGAAAATGA
GAGTTTAGCCTAGCGACGGGAAGCAGAAAATAGATAACAGAACAATCAAT
GTGACATCGTCGCCCACGTTGGGAAAATGTCGGAAATGCAAGCACTATGC
TTACTGCTTACAATGAGACGCTTCCTTCCATATCGAACTCCTTCTTCTGT
CAATTGCTGCTTGCCTAGAAGCCCTAGAGTGGCAAAAGGCGCGATTCAAG
CCAAAATGGTCTACCCTCCCC back to topprotein sequence of rna5536 >rna5536-protein ID=rna5536-protein|Name=rna5536|organism=Nannochloropsis gaditana|type=polypeptide|length=285bp
MRRGVLSCIRTHHASFLFLLLSLLAAGCAVEFRQPPPRTATHGDTPSCSI
AAYDEVVAKVMAEYCAAAYSCGSLEGCGNWSCNSCQLHSHAEAFRFSGGV
NGTGVSGLVVHDSDINKIILVFAGTQAGDLAAWANNLNGELTGYTPCADA
GCQVHTGFYADYQALAPAFLEPLSYALARFPRASLWVTGHSLGGALAMLA
VADLKGNHAVRIEALYTYGQPRVGNQAFAMNFIGLTRRQDAPTSYYRVVH
AQDPIPHVPPILLGFWHAPTEVFYNEEQTKYEVWK back to topmRNA from alignment at CM002466.1:233546..235469- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5536 ID=rna5536|Name=rna5536|organism=Nannochloropsis gaditana|type=mRNA|length=1924bp|location=Sequence derived from alignment at CM002466.1:233546..235469- (Nannochloropsis gaditana)
CATGCACAGCTTTCCCTGGATTTCCGGAATATCATGCGACGTGGAGTATT
AAGCTGCATCCGCACTCACCATGCGTCATTTCTATTTCTTCTGCTGTCGC
TGCTTGCCGCTGGATGCGCTGTGGAATTTCGTCAACCTCCTCCAAGAACT
GCAACGCATGGAGACACTCCAAGTTGCTCTATAGCCGCGTACGATGAGGT
GGTTGCCAAGGTCATGGCAGAATATTGTGCTGCTGCTTACTCCTGTGGCT
CTCTCGAGGGCTGCGGAAACTGGTCCTGCAACTCTTGTCAGCTGCATAGT
CACGCCGAAGCATTCCGTTTTTCCGGCGGAGTGAACGGAACAGGTGTATC
TGGCTTGGTCGTGCACGACTCTGACATCAATAAGATCATACTCGTCTTTG
CTGGTACGCAGGCAGGGGACCTGGCGGCCTGGGCGAACAACTTGAATGGG
GAATTAACGGGCTACACACCCTGTGCCGATGCTGGTTGCCAAGTGCACAC
CGGCTTCTACGCCGACTATCAGGTAAAGCCCCGGTGAGCAGGTGTGAATG
CTTTCCATGCAATATCTTTTTTCTTTTTTCGCTTCTCTCTAGATTTATGG
AAGTCAACTCTTCTTCACTTGCACTTGCCGTCTCTCGCTGTAACAGGCTC
TCGCCCCCGCCTTTTTAGAACCCTTGAGCTATGCCCTGGCTCGCTTTCCT
CGTGCCAGCCTCTGGGTCACTGGACACTCGTTAGGCGGAGCACTGGCGAT
GCTAGCAGTTGCTGATCTCAAAGGCAATCATGCCGTGCGAATAGAAGCCC
TCTATACATATGGTCCGTGGCATAAGATCACTTCCTTCCTGTCGAATAGA
GAGATTGCCGCGTGCCTCTTCAGGTATCATGCCCGCAATCAAATTCACGG
AAAATAAAACTTTCTCCACACAATAGGACAACCTCGTGTGGGCAATCAAG
CCTTCGCCATGAACTTCATCGGCCTAACTAGACGTCAAGATGCTCCTACG
AGCTACTACCGCGTTGTGCATGCCCAGGACCCTATTCCTCATGTCCCTCC
GATACTGCTCGGCTTCTGGCATGCCCCGACGGAGGTTTTTTATAACGAGG
AGCAAACGAAGTATGAGGTATGGAAGTAGGAGGGGTCGGTTTGGGATAAG
AATCAACGCAGCTTTGTCCTGACGGGCGTGGGTGAGATGCGTTCCGTCCT
TCTCCCGGCATGTGCGCAGGGGGCATACAGAGGTGCATCAACTGCGCTCC
GTCGAGTGCCATTTTTTTATTTTTTTTTAAATGAAACCCCAAGATCGTAC
CGTTTTGCCGATCCGCTTCCTCTTCCCCTCCCCGCACTTAGCTTTGTGAC
GATACTGGCGAAGACTTTTACTGCTCCAATTCCTTCTTGTTCGCCTTCAA
GGTCGACGATCATTTTAATTACATGGGCGTTCCACTTTGAAGGATTATGA
AAAAATACAAATCGGAAAAGGTGCTCATTGTACATAGTTGAGGTCGCCTG
GCGCACGTCTTCTTTTGCAGAGAAGGATCGCAGCAAAGGTCGACACAGAA
GCTGTTGTAAAAAGTAAGAATGGATCAATTATTACTAAAATTGGCCCCAA
CGTAGGATTTTTCATATTGTAAAGAGGGGAGGGTAGACCATTTTGGCTTG
AATCGCGCCTTTTGCCACTCTAGGGCTTCTAGGCAAGCAGCAATTGACAG
AAGAAGGAGTTCGATATGGAAGGAAGCGTCTCATTGTAAGCAGTAAGCAT
AGTGCTTGCATTTCCGACATTTTCCCAACGTGGGCGACGATGTCACATTG
ATTGTTCTGTTATCTATTTTCTGCTTCCCGTCGCTAGGCTAAACTCTCAT
TTTCAGCCTAAACAGTTTGTATAAAACCTCCTTCATGCAAAAAGAAACAC
GTGACACAACTCATAGCACAAGCA back to topCoding sequence (CDS) from alignment at CM002466.1:233546..235469- >rna5536 ID=rna5536|Name=rna5536|organism=Nannochloropsis gaditana|type=CDS|length=2574bp|location=Sequence derived from alignment at CM002466.1:233546..235469- (Nannochloropsis gaditana)
GACAACCTCGTGTGGGCAATCAAGCCTTCGCCATGAACTTCATCGGCCTA
ACTAGACGTCAAGATGCTCCTACGAGCTACTACCGCGTTGTGCATGCCCA
GGACCCTATTCCTCATGTCCCTCCGATACTGCTCGGCTTCTGGCATGCCC
CGACGGAGGTTTTTTATAACGAGGAGCAAACGAAGTATGAGGTATGGAAG
TAGGCTCTCGCCCCCGCCTTTTTAGAACCCTTGAGCTATGCCCTGGCTCG
CTTTCCTCGTGCCAGCCTCTGGGTCACTGGACACTCGTTAGGCGGAGCAC
TGGCGATGCTAGCAGTTGCTGATCTCAAAGGCAATCATGCCGTGCGAATA
GAAGCCCTCTATACATATGATGCGACGTGGAGTATTAAGCTGCATCCGCA
CTCACCATGCGTCATTTCTATTTCTTCTGCTGTCGCTGCTTGCCGCTGGA
TGCGCTGTGGAATTTCGTCAACCTCCTCCAAGAACTGCAACGCATGGAGA
CACTCCAAGTTGCTCTATAGCCGCGTACGATGAGGTGGTTGCCAAGGTCA
TGGCAGAATATTGTGCTGCTGCTTACTCCTGTGGCTCTCTCGAGGGCTGC
GGAAACTGGTCCTGCAACTCTTGTCAGCTGCATAGTCACGCCGAAGCATT
CCGTTTTTCCGGCGGAGTGAACGGAACAGGTGTATCTGGCTTGGTCGTGC
ACGACTCTGACATCAATAAGATCATACTCGTCTTTGCTGGTACGCAGGCA
GGGGACCTGGCGGCCTGGGCGAACAACTTGAATGGGGAATTAACGGGCTA
CACACCCTGTGCCGATGCTGGTTGCCAAGTGCACACCGGCTTCTACGCCG
ACTATCAGGACAACCTCGTGTGGGCAATCAAGCCTTCGCCATGAACTTCA
TCGGCCTAACTAGACGTCAAGATGCTCCTACGAGCTACTACCGCGTTGTG
CATGCCCAGGACCCTATTCCTCATGTCCCTCCGATACTGCTCGGCTTCTG
GCATGCCCCGACGGAGGTTTTTTATAACGAGGAGCAAACGAAGTATGAGG
TATGGAAGTAGGCTCTCGCCCCCGCCTTTTTAGAACCCTTGAGCTATGCC
CTGGCTCGCTTTCCTCGTGCCAGCCTCTGGGTCACTGGACACTCGTTAGG
CGGAGCACTGGCGATGCTAGCAGTTGCTGATCTCAAAGGCAATCATGCCG
TGCGAATAGAAGCCCTCTATACATATGATGCGACGTGGAGTATTAAGCTG
CATCCGCACTCACCATGCGTCATTTCTATTTCTTCTGCTGTCGCTGCTTG
CCGCTGGATGCGCTGTGGAATTTCGTCAACCTCCTCCAAGAACTGCAACG
CATGGAGACACTCCAAGTTGCTCTATAGCCGCGTACGATGAGGTGGTTGC
CAAGGTCATGGCAGAATATTGTGCTGCTGCTTACTCCTGTGGCTCTCTCG
AGGGCTGCGGAAACTGGTCCTGCAACTCTTGTCAGCTGCATAGTCACGCC
GAAGCATTCCGTTTTTCCGGCGGAGTGAACGGAACAGGTGTATCTGGCTT
GGTCGTGCACGACTCTGACATCAATAAGATCATACTCGTCTTTGCTGGTA
CGCAGGCAGGGGACCTGGCGGCCTGGGCGAACAACTTGAATGGGGAATTA
ACGGGCTACACACCCTGTGCCGATGCTGGTTGCCAAGTGCACACCGGCTT
CTACGCCGACTATCAGGACAACCTCGTGTGGGCAATCAAGCCTTCGCCAT
GAACTTCATCGGCCTAACTAGACGTCAAGATGCTCCTACGAGCTACTACC
GCGTTGTGCATGCCCAGGACCCTATTCCTCATGTCCCTCCGATACTGCTC
GGCTTCTGGCATGCCCCGACGGAGGTTTTTTATAACGAGGAGCAAACGAA
GTATGAGGTATGGAAGTAGGCTCTCGCCCCCGCCTTTTTAGAACCCTTGA
GCTATGCCCTGGCTCGCTTTCCTCGTGCCAGCCTCTGGGTCACTGGACAC
TCGTTAGGCGGAGCACTGGCGATGCTAGCAGTTGCTGATCTCAAAGGCAA
TCATGCCGTGCGAATAGAAGCCCTCTATACATATGATGCGACGTGGAGTA
TTAAGCTGCATCCGCACTCACCATGCGTCATTTCTATTTCTTCTGCTGTC
GCTGCTTGCCGCTGGATGCGCTGTGGAATTTCGTCAACCTCCTCCAAGAA
CTGCAACGCATGGAGACACTCCAAGTTGCTCTATAGCCGCGTACGATGAG
GTGGTTGCCAAGGTCATGGCAGAATATTGTGCTGCTGCTTACTCCTGTGG
CTCTCTCGAGGGCTGCGGAAACTGGTCCTGCAACTCTTGTCAGCTGCATA
GTCACGCCGAAGCATTCCGTTTTTCCGGCGGAGTGAACGGAACAGGTGTA
TCTGGCTTGGTCGTGCACGACTCTGACATCAATAAGATCATACTCGTCTT
TGCTGGTACGCAGGCAGGGGACCTGGCGGCCTGGGCGAACAACTTGAATG
GGGAATTAACGGGCTACACACCCTGTGCCGATGCTGGTTGCCAAGTGCAC
ACCGGCTTCTACGCCGACTATCAG back to top
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