EWM25157.1, cds5522 (CDS) Nannochloropsis gaditana

Overview
NameEWM25157.1
Unique Namecds5522
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:234948..235436 -
Alignment locationCM002466.1:234658..234823 -
Alignment locationCM002466.1:234341..234543 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25157.1
Productlipase family protein
Orig transcript idgnl|cribi|Naga_100016g73.2966.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:234948..235436 -
CM002466.1supercontigCM002466.1:234658..234823 -
CM002466.1supercontigCM002466.1:234341..234543 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR002921Fungal_lipase-like
IPR029058AB_hydrolase
Homology
BLAST of EWM25157.1 vs. NCBI_GenBank
Match: gi|585106795|gb|EWM25157.1| (lipase family protein [Nannochloropsis gaditana])

HSP 1 Score: 592.808 bits (1527), Expect = 0.000e+0
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0
Query:    1 MRRGVLSCIRTHHASFLFLLLSLLAAGCAVEFRQPPPRTATHGDTPSCSIAAYDEVVAKVMAEYCAAAYSCGSLEGCGNWSCNSCQLHSHAEAFRFSGGVNGTGVSGLVVHDSDINKIILVFAGTQAGDLAAWANNLNGELTGYTPCADAGCQVHTGFYADYQALAPAFLEPLSYALARFPRASLWVTGHSLGGALAMLAVADLKGNHAVRIEALYTYGQPRVGNQAFAMNFIGLTRRQDAPTSYYRVVHAQDPIPHVPPILLGFWHAPTEVFYNEEQTKYEVWK 285
            MRRGVLSCIRTHHASFLFLLLSLLAAGCAVEFRQPPPRTATHGDTPSCSIAAYDEVVAKVMAEYCAAAYSCGSLEGCGNWSCNSCQLHSHAEAFRFSGGVNGTGVSGLVVHDSDINKIILVFAGTQAGDLAAWANNLNGELTGYTPCADAGCQVHTGFYADYQALAPAFLEPLSYALARFPRASLWVTGHSLGGALAMLAVADLKGNHAVRIEALYTYGQPRVGNQAFAMNFIGLTRRQDAPTSYYRVVHAQDPIPHVPPILLGFWHAPTEVFYNEEQTKYEVWK
Sbjct:    1 MRRGVLSCIRTHHASFLFLLLSLLAAGCAVEFRQPPPRTATHGDTPSCSIAAYDEVVAKVMAEYCAAAYSCGSLEGCGNWSCNSCQLHSHAEAFRFSGGVNGTGVSGLVVHDSDINKIILVFAGTQAGDLAAWANNLNGELTGYTPCADAGCQVHTGFYADYQALAPAFLEPLSYALARFPRASLWVTGHSLGGALAMLAVADLKGNHAVRIEALYTYGQPRVGNQAFAMNFIGLTRRQDAPTSYYRVVHAQDPIPHVPPILLGFWHAPTEVFYNEEQTKYEVWK 285          
BLAST of EWM25157.1 vs. NCBI_GenBank
Match: gi|585112660|gb|EWM30033.1| (lipase family protein [Nannochloropsis gaditana])

HSP 1 Score: 162.155 bits (409), Expect = 5.788e-44
Identity = 106/284 (37.32%), Postives = 155/284 (54.58%), Query Frame = 0
Query:    6 LSCIRTHHASFLF-LLLSLLAAGCAVEFRQPPPRTATH-GDTPSCSIAAYDEVVAKVMAEYCAAAYSCGSLEGCGNWSCNSCQLHSHAEAFRFSGGV-NGTGVSGLVVHDSDINKIILVFAGTQAGDLAAWANNLNGELTGYTPCADAGCQVHTGFYADYQALAPAFLEPLSYALAR-FPRASLWVTGHSLGGALAMLAVADLKGNHAVRIEALYTYGQPRVGNQAFAMNFIGLTRRQDAPTS--YYRVVHAQDPIPHVPPILLGFWHAPTEVFYNEEQTKYEV 283
            LS +  HH + +  ++LS L + C +       + A    +T   + + Y+E   +VM +Y AAAY C +   C  W+C++C  H   E  R    V NG G  G    D     +++ FAGT    +A W ++L+   T +       C+VH GF   Y AL P  L+PL  AL R  P+A +WVTGHSLG ALA+L + DL  + +  + A+  +GQPRVGNQ F+ +F+     Q A  S  +YR+VH +DP+PH+PP   GF H+P EVFY + +T Y +
Sbjct:   18 LSGMPPHHKTRIKGVILSSLVSSCVLFLTSITCQAAARLANTKQQNSSFYNETAVRVMLDYAAAAYYCRT-SACEAWACSACSRHPRTEVRRVYDNVHNGNGFVGW---DPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGCQECKVHAGFLTTYSALRPQ-LQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDLL-SLSYPVRAVVNFGQPRVGNQHFS-SFVA---AQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTKNETYYHI 291          
BLAST of EWM25157.1 vs. NCBI_GenBank
Match: gi|585108471|gb|EWM26431.1| (lipase [Nannochloropsis gaditana])

HSP 1 Score: 165.622 bits (418), Expect = 1.359e-43
Identity = 90/231 (38.96%), Postives = 126/231 (54.55%), Query Frame = 0
Query:   53 YDEVVAKVMAEYCAAAYSCGSLEGCGNWSCNSCQLHSHAEAFRFSGGVNGTGVSGLVVHDSDINKIILVFAGTQAGDLAAWANNLNGELTGYTPCADAGCQVHTGFYADYQALAPAFLEPLSYALARFPRASLWVTGHSLGGALAMLAVADLKGNHAVRIEALYTYGQPRVGNQAFAMNFIGLTRRQDAPTSYYRVVHAQDPIPHVPPILLGFWHAPTEVFYNEEQTKYEV 283
            Y+    + + +Y  A+YSC +   C  W+C++C  H   E  R S   +G G  G   ++S    +++ FAGT   D+  W  NL+ +   +      GCQVHTGFY  Y  L     E + Y L + P A +WVTGHSLG A+A+  + DL  + +  +  +  +GQPRVGN+ FA     L    D P   YR+VH +DP+PH+PP   GF H P EVFYNE+QT Y V
Sbjct:  324 YNITAVRTILDYAEASYSCKT-SACEAWNCSTCSRHPDTEVRRISAP-DGDGFVG---YNSVEGALVVAFAGTSMDDIVEWMANLDFKKEDFPHDGCEGCQVHTGFYTAYLELRSQVREFVQYFLQQHPDAPIWVTGHSLGAAIAVHCMVDLM-SLSYNVRRVVNFGQPRVGNKQFATFVASLAESLDFP--LYRLVHHRDPVPHLPPRAFGFHHQPFEVFYNEDQTSYIV 546          
BLAST of EWM25157.1 vs. NCBI_GenBank
Match: gi|525585605|gb|EPS31855.1| (hypothetical protein PDE_06813 [Penicillium oxalicum 114-2])

HSP 1 Score: 130.183 bits (326), Expect = 2.025e-32
Identity = 84/216 (38.89%), Postives = 109/216 (50.46%), Query Frame = 0
Query:   62 AEYCAAAYSCGSLEG------CGNWSCNSCQLHSHAEAFRFSGGVNGTGVSGLVVHDSDINKIILVFAGTQAGDLAAWANNLNGELTGYTPCADAGCQVHTGFYADYQALAPAFLEPLSYALARFPRASLWVTGHSLGGALAMLAVADLKGNHAVRIEALYTYGQPRVGNQAFAMNFIGLTRRQDAPTSYYRVVHAQDPIPHVPPILLGFWHAPTE 271
            A++ AAAY  G+  G      C   +C   Q       + F         +G +  D+   +IIL F G++    + W  NL+ ELT  T C+  GC+VH GF+ DYQ +A      +  AL  +P  SL VTGHSLGGALAMLA  DL  N       +YTYGQPRVGN A A     +  +       +RV HA D +P +PP L GF HA  E
Sbjct:   39 AQWSAAAYCSGNTSGANQVVSCSANNCPDVQASGATMLYEFDSTNTYGDAAGFLAADTTQQQIILSFRGSRT--TSNWIANLDTELTSSTLCS--GCEVHQGFWLDYQTVAATLKAQIDAALNTYPGYSLVVTGHSLGGALAMLAGLDL--NSQGYAPTIYTYGQPRVGNLALAQYITNVGNQ-------WRVTHADDAVPKLPPRLFGFSHASPE 241          
BLAST of EWM25157.1 vs. NCBI_GenBank
Match: gi|118368003|ref|XP_001017211.1| (lipase family protein [Tetrahymena thermophila SB210] >gi|89298978|gb|EAR96966.1| lipase family protein (macronuclear) [Tetrahymena thermophila SB210])

HSP 1 Score: 128.642 bits (322), Expect = 7.547e-32
Identity = 90/239 (37.66%), Postives = 126/239 (52.72%), Query Frame = 0
Query:   49 SIAAYDEVVAKVMAEYCAAAYSCGSLEGCGNWSCNS-CQLH---SHAEAFRFSGGVNGTGVSGLVVHDSDINKIILVFAGTQAGDLAAWANNLNGELTGYTPCADAGCQVHTGFYADYQALAPAFLEPLSYALARFPRASLWVTGHSLGGALAMLAVADLKGNHAVRIEALYTYGQPRVGNQAFAMNFIGLTRRQDAPTSYYRVVHAQDPIPHVPPILLGFWHAPTEVFYNEEQTKYEV 283
            ++  YDE  A   + Y A A  C SL+   NWSC + CQ++   +  +AF  S       + G   +D + N II  F  T   DL    + L+     Y  C   GC+VH GF   ++ L    L  +S     +P A + V GHSLGGALA+LA  D+  N    ++ LYT+GQPRVGN+ FA  F       +   + YR++H +D IPHVP  ++GF+H  TEV+Y+E  T YEV
Sbjct:   28 NVDQYDEEFAYEASGY-AQASRC-SLQNIQNWSCGTACQINPGVTDIKAFYNSTH----QIQGYTAYDQNKNMIIAAFRPT-VTDLNTLID-LDYFQIKYASCN--GCEVHRGFLLAWKDLQNQVLTSISELANTYPNAKVGVFGHSLGGALAVLASIDI-NNDVKHVDYLYTFGQPRVGNKKFAKYF------NERIGNIYRLIHNRDLIPHVPLRVMGFYHEGTEVWYDEPNTSYEV 249          
BLAST of EWM25157.1 vs. NCBI_GenBank
Match: gi|955171108|emb|CUG86636.1| (lipase 3, putative [Bodo saltans])

HSP 1 Score: 127.102 bits (318), Expect = 5.663e-31
Identity = 84/230 (36.52%), Postives = 115/230 (50.00%), Query Frame = 0
Query:   52 AYDEVVAKVMAEYCAAAYSCGSLEGCGNWSCNSCQLHSHAEAFRFSGGVNGTGVSG--LVVHDSDINKIILVFAGTQAGDLAAWANNLNGELTGYTPCADAGCQVHTGFYADYQALAPAFLEPLSYALARFPRASLWVTGHSLGGALAMLAVADL--KGNHAVRIEALYTYGQPRVGNQAFAMNFIGLTRRQDAPTSYYRVVHAQDPIPHVPPILLGFWHAPTEVFYNEE 277
            +Y E  A     YC AAY    +    +W+C SC  H +   F+  G  N     G     +D   N+I++ F G+   D A W  + +  +  Y      GCQVHTGF+  YQ LA A L  +S  L   P A + VTGHSLG A+AM A  D+  K + A     +Y +G+PR+GN AFA      +         YR+ HA DP+PH+PP+  GF HA  E++YN  
Sbjct:   22 SYSEDQAWNSLLYCKAAYC--DVNKIASWTCESCGDHPN---FQVKGAYNNGSFHGQCFTGYDPSRNQIVVSFRGS--ADFANWIADFDFFMMPYPDAECVGCQVHTGFFQVYQELAAAVLRDVSELLIAHPSAEVLVTGHSLGAAIAMHAGVDIARKISGAHSKTYVYNFGEPRLGNPAFA----AWSAAVLPAGKQYRLTHATDPVPHLPPMDFGFLHARHELWYNNN 240          
BLAST of EWM25157.1 vs. NCBI_GenBank
Match: gi|145475475|ref|XP_001423760.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124390821|emb|CAK56362.1| unnamed protein product [Paramecium tetraurelia])

HSP 1 Score: 124.79 bits (312), Expect = 2.957e-30
Identity = 79/227 (34.80%), Postives = 118/227 (51.98%), Query Frame = 0
Query:   53 YDEVVAKVMAEYCAAAYSCGSLEGCGNWSCNS-CQLHSHAEAFR-FSGGVN-GTGVSGLVVHDSDINKIILVFAGTQAGDLAAWANNLNGELTGYTPCADAGCQVHTGFYADYQALAPAFLEPLSYALARFPRASLWVTGHSLGGALAMLAVADLKGNHAVRIEALYTYGQPRVGNQAFAMNFIGLTRRQDAPTSYYRVVHAQDPIPHVPPILLGFWHAPTEVFYNE 276
            YDE  A     +CAA+Y   ++    NWSC + C    + +  + F    N   G SG   +D   N+II+VF GT    +  W  ++N   T +  C +  CQVH GFY  Y  +    L       +++P A L +TGHSLGGAL+  A+  L  N   R++  Y++G PRVG+ AF  N++    +   P++ +RV H  DP+PH+P  + GF H  TE +Y +
Sbjct:   32 YDETAATRYWYFCAASYCNPNV--ILNWSCTTPCSKTPYMDDVQIFVNATNENAGYSG---YDPKHNEIIIVFRGTLPWSIKNWFEDINYIKTSFPYCTN-NCQVHRGFYYSYLGIQDQVLNAAKRLTSKYPNAKLVITGHSLGGALSTHALVALTVN-GYRVDHYYSFGSPRVGDSAF-FNYV----KSIYPSAKFRVTHDHDPVPHLPMEVQGFHHINTEAYYKD 246          
BLAST of EWM25157.1 vs. NCBI_GenBank
Match: gi|145503121|ref|XP_001437538.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124404688|emb|CAK70141.1| unnamed protein product [Paramecium tetraurelia])

HSP 1 Score: 124.405 bits (311), Expect = 5.874e-30
Identity = 72/211 (34.12%), Postives = 106/211 (50.24%), Query Frame = 0
Query:   75 EGCGNWSCNS-CQLH-SHAEAFRFSGGVNGTGVSGLVVHDSDINKIILVFAGTQAGDLAAWANNLNGELTGYTPCADAGCQVHTGFYADYQALAPAFLEPLSYALARFPRASLWVTGHSLGGALAMLAVADLKGNHAVRIEALYTYGQPRVGNQAFAMNFIGLTRRQDAPTSYYRVVHAQDPIPHVPPILLGFWHAPTEVFYNEEQTKYEV 283
            E   NW C   CQ H    +   F+G  +     G   ++   N I+LV+  TQ  DL  W NN+      +  C D  C VH GF+  Y A++   +        ++P++ + +TGHSLGGA+A L   D+     ++++  +TYG PRVGN  FA  FI        P  Y+RV H  D + H PP+   + H P EV+YNEE T +++
Sbjct:   59 EEIANWDCGYYCQQHPDMVDVQAFAGNYSSQAYCG---YNPKENYIVLVYRSTQ--DLTNWINNVKFFKQEFGDCKD--CAVHLGFWETYTAISNEMINCTKTLRQKYPKSKVLITGHSLGGAIAALMAVDV-TRLGIQVDNFFTYGAPRVGNIEFATWFINYV----IPKEYWRVTHNADTVVHTPPMNFYYSHLPQEVWYNEENTSFKL 257          
BLAST of EWM25157.1 vs. NCBI_GenBank
Match: gi|1177788917|gb|ORC84094.1| (lipase, partial [Trypanosoma theileri])

HSP 1 Score: 121.709 bits (304), Expect = 1.266e-29
Identity = 82/233 (35.19%), Postives = 119/233 (51.07%), Query Frame = 0
Query:   47 SCSI-AAYDEVVAKVMAEYCAAAYSCGSLEGCGNWSCNSCQLHSHAEAFRFSGGVNGTGVSGLVVHDSDINKIILVFAGTQAGDLAAWANNLNGELTGYTPCADAGCQVHTGFYADYQALAPAFLEPLSYALARFPRASLWVTGHSLGGALAMLAVADLKGNHAV-----RIEALYTYGQPRVGNQAFAMNFIGLTRRQDAPTSYYRVVHAQDPIPHVPPILLGFWHAPTEVF 273
            SC + AAY E +A     +  A+Y    +   GNWSC+SC +H    +F+ +          L       ++I++ F G+Q  ++  W +N+  +   Y      GC VH GFY  + +L     E L   +A +PR  + +TGHSLGGA+A+LA AD            + E LYT+G PRVGN+AF      L  R+   T  YRV H +D +PH+PPI  GF H+  EV+
Sbjct:   23 SCGVHAAYSETLAMSALYFSKASYC--DVPSIGNWSCDSCAMHP---SFQLTKVFENATEGALAYMGVSQDRIVISFRGSQ--NIPNWISNMEFKQITYPNATCEGCSVHRGFYHSFSSLRNEMWEELQRLVAEYPRRPVLITGHSLGGAMAVLAAADFAAQAYAIGAGPQFE-LYTFGAPRVGNEAFTAWMSELFCRRKHKT--YRVTHKRDVVPHLPPISFGFQHSVHEVW 245          
BLAST of EWM25157.1 vs. NCBI_GenBank
Match: gi|118359347|ref|XP_001012913.1| (lipase family protein [Tetrahymena thermophila SB210] >gi|89294680|gb|EAR92668.1| lipase family protein (macronuclear) [Tetrahymena thermophila SB210])

HSP 1 Score: 121.709 bits (304), Expect = 2.930e-29
Identity = 83/244 (34.02%), Postives = 124/244 (50.82%), Query Frame = 0
Query:   48 CSIAAYDEVVAKVMAEYCAAAYSCGSLEGCGNWSCNSCQLHSHAEAFRFSGGVNGT-GVSGLVVHDSDINKIILVFAGTQAGDLAAWANNLNGELTGYTPCADAGCQVHTGFYADYQALAPAFLEPLSYALARFPRASLWVTGHSLGGAL---AMLAVADLKGNHAVRIEALYTYGQPRVGNQAFAMNFIGLTRRQDAPTSYYRVVHAQDPIPHVPPIL--LGFWHAPTEVFYN---EEQTKYE 282
            CS   Y+E +A+ +A +  A+Y C   +    W+C S    +      FS   N T   SG + + +  + II+VF GT    +  W  +LN     Y  C +  C VH GFY  +  L    ++  +    ++P + ++VTGHSLG A+   +M  + +L GN    I+A Y YG PRVGN+A+A  F      Q+    Y R+ +A DP+PH+PPIL    F+H   E+FY    E+  KYE
Sbjct:   16 CSQFQYNETLAQDLAGFSLASY-CNP-KYLQQWNCGSACKKNPNGLTDFSYLYNKTLKASGYIGYSAHHDAIIVVFRGTVPWLIQNWIADLNTIKIQYPFCEN--CYVHKGFYKQFNQLKSQLIQSFTEIRQKYPSSKIFVTGHSLGAAMSFHSMPIIFELNGNKP--IDAFYNYGSPRVGNEAYATWF----NLQNFALQYGRINNAADPVPHLPPILFPFQFYHTNHEIFYTSFIEDGNKYE 249          
The following BLAST results are available for this feature:
BLAST of EWM25157.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106795|gb|EWM25157.1|0.000e+0100.00lipase family protein [Nannochloropsis gaditana][more]
gi|585112660|gb|EWM30033.1|5.788e-4437.32lipase family protein [Nannochloropsis gaditana][more]
gi|585108471|gb|EWM26431.1|1.359e-4338.96lipase [Nannochloropsis gaditana][more]
gi|525585605|gb|EPS31855.1|2.025e-3238.89hypothetical protein PDE_06813 [Penicillium oxalic... [more]
gi|118368003|ref|XP_001017211.1|7.547e-3237.66lipase family protein [Tetrahymena thermophila SB2... [more]
gi|955171108|emb|CUG86636.1|5.663e-3136.52lipase 3, putative [Bodo saltans][more]
gi|145475475|ref|XP_001423760.1|2.957e-3034.80hypothetical protein [Paramecium tetraurelia strai... [more]
gi|145503121|ref|XP_001437538.1|5.874e-3034.12hypothetical protein [Paramecium tetraurelia strai... [more]
gi|1177788917|gb|ORC84094.1|1.266e-2935.19lipase, partial [Trypanosoma theileri][more]
gi|118359347|ref|XP_001012913.1|2.930e-2934.02lipase family protein [Tetrahymena thermophila SB2... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5536rna5536Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications