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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101071g1.2323.mrna |
| Orig protein id | gnl|cribi|Naga_101071g1.2323 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:148527..149896 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5508 ID=rna5508|Name=rna5508|organism=Nannochloropsis gaditana|type=mRNA|length=1042bp
AAGCATTGCGCCTTCTACAGGTTCCTCATAAGAAGCCTACGAGGTTGATC
TTAGCCTGCGAATTGCAAAACTAAGCGCGAACGTCTCGTGATCGAGCATC
TCGATGAAAGCCCCTGGAAAGCCTTTCCATGCCCGATTTGCAAACGTGCC
ACCGTCGGTCAATACTCCAAATTCTACAACAACAAGCACGACTAGCATCA
ATTATGACGTAGCGTCCTCGCCCGTGCGTCTGAATGCATTCGCTTCCCGA
CTTGCCACGTCGTCCACCGTGGCATCTTCTTCCAAACGCATCGCTTTTTT
ACCCTTTGTACAACGCTTGGAGCGCGTTATCTTCCAAGGGATTCCACCAA
CCTACCCTTTACGTGCCAAGATGAAGATCACCCTGGACACCACCTCCTTT
GGTATGGCTTGGGATATTTTCCAGTCTCTGGCCAGCCTACTTTCATGCAT
CACTTATGTGGCCTCCACGTACCATTACATCTTTCCTCTTTTTCTGCAAT
GGACGCTTACGATTATATTCTCCTGCGAGCTTCTACTGCGCTACTACGTC
TCGGAGAATCGATGGGCCCACACCTTTGAATTCTTCACCCTGATAGACTT
GTTGACCGTCCTTCCCATGTATATTCAATTTATCGTCGCACACACGGGAA
CGCCCATGGCGGGCCACAGATCCCTCTTCTTTCTCCGCTTTGCCCGCACC
ATGAACATTATGCGGATCGTCCGTACCTTCCGTTTCGGTGGGGTCCGGCG
GATGCCGAAATCCACCCGACAGTGCTCCATTTTGGGCCTCACGGTCGTCT
CCCTGGTTTTCCTCTCTGCGGGCTTGGTGCAGTTGGTCGAGCGGGATCTG
ACGTTTGGGAGGGCAGTGTACTTTATGATCGTGACCATGAGCACGGTTGG
CTACGGGGACATCCATCCCACCAGGTATGCTGACTTTCTCCTCCCTCCTG
CCCGCCCTCCCTCCCTGCCTCTCTTCTACTCTTCCTTCCTCATGACCTCA
GTCCAATATTCCTTTACATCAAGTCATCACCTGTCCCTCTAA back to topprotein sequence of rna5508 >rna5508-protein ID=rna5508-protein|Name=rna5508|organism=Nannochloropsis gaditana|type=polypeptide|length=292bp
MKFSTRTSVIDGSGILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVG
SYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVGGHYDGGCF
DAVLREGGKLGKAMLSEPKLVNCERTKANYLREISSRTYPTTCSTKMSAL
GFEKAWQTFIDTQASPQEKQRFYQEVGGSTFIERCFVAPAKEMSAETLGD
IIETLAEAITMEEGGKREDSAENGLAPAFRGDLVRLLYILPGMGRFSVTF
ALLTPTQATTARKLVRQSVREEGQDKEEGRQGLMEVWSPYIA back to topmRNA from alignment at CM002466.1:148527..149896- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5508 ID=rna5508|Name=rna5508|organism=Nannochloropsis gaditana|type=mRNA|length=1370bp|location=Sequence derived from alignment at CM002466.1:148527..149896- (Nannochloropsis gaditana)
AGAGCTGCACAGGATAACGCATGAATGACTCGAAAGAAAGCATCCAGCAG
TCATTCACATATGTATATCTCAGTACACGCGAAAACAGTGTGGGGGGACG
TCCAGAGTCAAGGATGGTGGAATTCTTGCCTCAAAACGCCCCGCTTCTCG
TCATCATTTTGCCGTGGGACCCGTGACCTTACGGATCGAAAAGGATGGCA
AGGGAGGTTAAAATTTACTTGGGTAAGACCCATTTTTCAGGGAAAGAGAG
ACTCATTCACGATCTTCCTTTCACAAACAGGACAGGGGCATGAAATTTTC
TACGAGGACTTCGGTAATCGATGGCTCGGGAATCCTAGACATGCGCAAGC
TCAAAAAGGAGTTGGTGAGTACCCTCGGGCATAAGCAGGCCCATGTCTCT
GCACGCGTGTACCGTTCTTTCCTATAATAACATCATTGCCACCTTACACA
TTCATCTCCCGCTCTGTGATCCAGAAAGAAGCCATGGAGGAAGATCATCG
ACTTTCCTTGGTGGACGCCGCGAAAAAACGCGCTATACGGACCGTGGGAA
GTTATGAGGAATTTCAGCATCGGGTTGCCTACGCCCACCTGCGACCACTT
TCACGCAAAGACATCCAAAATGTGGCCCAAGACACACGAGGATTTTCCAA
TGCAATTGCGCGTAAGAATGTCGGGGGACATTATGATGGAGGATGCTTCG
ATGCGGTGCTACGGGAAGGGGGAAAACTAGGCAAGGCCATGCTTTCGGAG
CCAAAATTAGTGAATTGCGAGCGAACCAAGGCGAATTACTTGCGGGAAAT
TTCTTCTAGAACATATCCTACTACCTGTAGTACCAAAATGTCTGCCTTGG
GTTTCGAAAAAGCATGGCAGACATTTATCGATACCCAGGCGTCCCCTCAA
GAAAAGCAACGTTTCTATCAGGAAGTGGGAGGCTCGACATTCATTGAACG
GTGCTTCGTTGCTCCCGCCAAAGAAATGAGTGCAGAGACGTTGGGGGATA
TAATTGAGACTTTGGCAGAGGCAATTACGATGGAGGAAGGAGGCAAGCGG
GAGGACAGCGCGGAGAATGGACTAGCTCCTGCCTTCAGGGGAGACCTGGT
GAGGCTGCTATATATCCTACCCGGAATGGGAAGATTCTCAGTCACGTTCG
CCCTTCTCACTCCAACGCAAGCAACGACGGCCAGGAAGCTGGTTAGGCAG
TCGGTGAGAGAGGAAGGACAGGATAAGGAGGAGGGAAGACAAGGGTTGAT
GGAGGTGTGGAGTCCCTACATAGCTTAGAGGAGTGCCCGAAGGCCCCGGG
GAGAGAAAAGCTATGTAGCAACATCAAAGAGGGAATCGAAAAGCCTGAGA
AGCAATGCGCGTGGATGTGT back to topCoding sequence (CDS) from alignment at CM002466.1:148527..149896- >rna5508 ID=rna5508|Name=rna5508|organism=Nannochloropsis gaditana|type=CDS|length=1758bp|location=Sequence derived from alignment at CM002466.1:148527..149896- (Nannochloropsis gaditana)
AAAGAAGCCATGGAGGAAGATCATCGACTTTCCTTGGTGGACGCCGCGAA
AAAACGCGCTATACGGACCGTGGGAAGTTATGAGGAATTTCAGCATCGGG
TTGCCTACGCCCACCTGCGACCACTTTCACGCAAAGACATCCAAAATGTG
GCCCAAGACACACGAGGATTTTCCAATGCAATTGCGCGTAAGAATGTCGG
GGGACATTATGATGGAGGATGCTTCGATGCGGTGCTACGGGAAGGGGGAA
AACTAGGCAAGGCCATGCTTTCGGAGCCAAAATTAGTGAATTGCGAGCGA
ACCAAGGCGAATTACTTGCGGGAAATTTCTTCTAGAACATATCCTACTAC
CTGTAGTACCAAAATGTCTGCCTTGGGTTTCGAAAAAGCATGGCAGACAT
TTATCGATACCCAGGCGTCCCCTCAAGAAAAGCAACGTTTCTATCAGGAA
GTGGGAGGCTCGACATTCATTGAACGGTGCTTCGTTGCTCCCGCCAAAGA
AATGAGTGCAGAGACGTTGGGGGATATAATTGAGACTTTGGCAGAGGCAA
TTACGATGGAGGAAGGAGGCAAGCGGGAGGACAGCGCGGAGAATGGACTA
GCTCCTGCCTTCAGGGGAGACCTGGTGAGGCTGCTATATATCCTACCCGG
AATGGGAAGATTCTCAGTCACGTTCGCCCTTCTCACTCCAACGCAAGCAA
CGACGGCCAGGAAGCTGGTTAGGCAGTCGGTGAGAGAGGAAGGACAGGAT
AAGGAGGAGGGAAGACAAGGGTTGATGGAGGTGTGGAGTCCCTACATAGC
TTAGATGAAATTTTCTACGAGGACTTCGGTAATCGATGGCTCGGGAATCC
TAGACATGCGCAAGCTCAAAAAGGAGTTGAAAGAAGCCATGGAGGAAGAT
CATCGACTTTCCTTGGTGGACGCCGCGAAAAAACGCGCTATACGGACCGT
GGGAAGTTATGAGGAATTTCAGCATCGGGTTGCCTACGCCCACCTGCGAC
CACTTTCACGCAAAGACATCCAAAATGTGGCCCAAGACACACGAGGATTT
TCCAATGCAATTGCGCGTAAGAATGTCGGGGGACATTATGATGGAGGATG
CTTCGATGCGGTGCTACGGGAAGGGGGAAAACTAGGCAAGGCCATGCTTT
CGGAGCCAAAATTAGTGAATTGCGAGCGAACCAAGGCGAATTACTTGCGG
GAAATTTCTTCTAGAACATATCCTACTACCTGTAGTACCAAAATGTCTGC
CTTGGGTTTCGAAAAAGCATGGCAGACATTTATCGATACCCAGGCGTCCC
CTCAAGAAAAGCAACGTTTCTATCAGGAAGTGGGAGGCTCGACATTCATT
GAACGGTGCTTCGTTGCTCCCGCCAAAGAAATGAGTGCAGAGACGTTGGG
GGATATAATTGAGACTTTGGCAGAGGCAATTACGATGGAGGAAGGAGGCA
AGCGGGAGGACAGCGCGGAGAATGGACTAGCTCCTGCCTTCAGGGGAGAC
CTGGTGAGGCTGCTATATATCCTACCCGGAATGGGAAGATTCTCAGTCAC
GTTCGCCCTTCTCACTCCAACGCAAGCAACGACGGCCAGGAAGCTGGTTA
GGCAGTCGGTGAGAGAGGAAGGACAGGATAAGGAGGAGGGAAGACAAGGG
TTGATGGAGGTGTGGAGTCCCTACATAGCTTAGATGAAATTTTCTACGAG
GACTTCGGTAATCGATGGCTCGGGAATCCTAGACATGCGCAAGCTCAAAA
AGGAGTTG back to top
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