EWM25179.1, cds5494 (CDS) Nannochloropsis gaditana

Overview
NameEWM25179.1
Unique Namecds5494
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:149533..149607 -
Alignment locationCM002466.1:148619..149422 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25179.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101071g1.2323.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:149533..149607 -
CM002466.1supercontigCM002466.1:148619..149422 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005856cytoskeleton
Homology
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|585106835|gb|EWM25179.1| (hypothetical protein Naga_101071g1 [Nannochloropsis gaditana])

HSP 1 Score: 605.905 bits (1561), Expect = 0.000e+0
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
Query:    1 MKFSTRTSVIDGSGILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVGGHYDGGCFDAVLREGGKLGKAMLSEPKLVNCERTKANYLREISSRTYPTTCSTKMSALGFEKAWQTFIDTQASPQEKQRFYQEVGGSTFIERCFVAPAKEMSAETLGDIIETLAEAITMEEGGKREDSAENGLAPAFRGDLVRLLYILPGMGRFSVTFALLTPTQATTARKLVRQSVREEGQDKEEGRQGLMEVWSPYIA 292
            MKFSTRTSVIDGSGILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVGGHYDGGCFDAVLREGGKLGKAMLSEPKLVNCERTKANYLREISSRTYPTTCSTKMSALGFEKAWQTFIDTQASPQEKQRFYQEVGGSTFIERCFVAPAKEMSAETLGDIIETLAEAITMEEGGKREDSAENGLAPAFRGDLVRLLYILPGMGRFSVTFALLTPTQATTARKLVRQSVREEGQDKEEGRQGLMEVWSPYIA
Sbjct:    1 MKFSTRTSVIDGSGILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVGGHYDGGCFDAVLREGGKLGKAMLSEPKLVNCERTKANYLREISSRTYPTTCSTKMSALGFEKAWQTFIDTQASPQEKQRFYQEVGGSTFIERCFVAPAKEMSAETLGDIIETLAEAITMEEGGKREDSAENGLAPAFRGDLVRLLYILPGMGRFSVTFALLTPTQATTARKLVRQSVREEGQDKEEGRQGLMEVWSPYIA 292          
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|1173945841|gb|OQR94425.1| (hypothetical protein THRCLA_22237, partial [Thraustotheca clavata])

HSP 1 Score: 67.781 bits (164), Expect = 1.095e-9
Identity = 74/280 (26.43%), Postives = 115/280 (41.07%), Query Frame = 0
Query:   14 GILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVGGHYDGGCFDAVLREGGKLGKAM--LSEPKLVNCERTKANYLREISSRTYPTTCSTKMSALGFEKAWQTFIDTQASPQEKQRFYQEVGGSTFIERCFVAPAKEMSAETLGDIIETLAEAITMEEGGKREDSAEN-----GLAPAFRGDLVRLLYILPGMG---RFSVTFALLTPTQATTARKLVRQSVREEGQDKEEGRQGL 283
            G  D   L+KEL  A+EED +    D  KKRAI T GSY+EF++ V  A L P++ K++QN+++  R  +    +K            +  RE  KL  A    + PK      T A +L     R +   CS+  +AL +E    T      +P+   R +Q                 E+ A+   +I++ +A+++T        D  E      G A A          I   +G   R  +  + L+P Q    RK ++       Q+ EE  QG 
Sbjct:    7 GTFDTEALQKELVNALEEDRKYKATDEMKKRAIHTAGSYDEFRNFVLCADLNPVTSKELQNLSKSQRQPNRLYKKK------------SQTRERVKLLNATDNFAIPK------TSAEFL-----RNWKRNCSS--NALKYEYLVLT------TPERLGRLFQ----------------AEIEADLFVNIVDCMADSLTNLNPNNELDDYEREQERVGFAFA----------IFQAIGTTRRLGLMLSFLSPDQVEKLRKFLQTLETLLNQENEECVQGF 229          
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|673019460|ref|XP_008863691.1| (hypothetical protein H310_02074 [Aphanomyces invadans] >gi|574480605|gb|ETW07598.1| hypothetical protein H310_02074 [Aphanomyces invadans])

HSP 1 Score: 65.4698 bits (158), Expect = 7.804e-9
Identity = 62/253 (24.51%), Postives = 112/253 (44.27%), Query Frame = 0
Query:   14 GILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVGGHYDGGCFDAVLREGGKLGKAMLSEPKLVNCERTKANYLREISSRTYPTTCSTKMSALGFEKAWQTFIDTQASPQEKQRFYQEVGGSTFIERCFVAPAKEMSAETLGDIIETL-AEAITMEEGGKREDSAENGLAPAFRGDLVRLLYILPGMGRFSVTFALLTPTQATTARKLV 265
            G  D   L+KEL  A+EED +  L D  KKRAI T  SY++F++ V  A L+P+S K++QN+++  R                            K  +   ++  +V+  ++K   + E+ +   P T      ++ F + W+    TQ +  +    Y +V     +++ F A   E+ ++ +  I+  L A+ + +      +D         F    + +L      GRF++T +  T +QATT  +LV
Sbjct:    7 GAFDTAALQKELALALEEDRKYKLTDEMKKRAIHTAASYDDFRNFVLCADLKPVSSKELQNLSKSER----------------------------KRNRMYQAKTAVVDTTKSK-TLVGELDAAVPPAT------SVEFLRTWRRSCVTQDAKYK----YLQVTTPERLQKLFHA---ELDSDLMLQIVACLNAQFVNLNPNNDVDDFETEHAHACFT---LAMLEAATKTGRFALTVSFWTSSQATTVAQLV 214          
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|698783413|ref|XP_009824750.1| (hypothetical protein H257_02699 [Aphanomyces astaci] >gi|574120800|gb|ETV86278.1| hypothetical protein H257_02699 [Aphanomyces astaci])

HSP 1 Score: 64.6994 bits (156), Expect = 1.363e-8
Identity = 67/252 (26.59%), Postives = 108/252 (42.86%), Query Frame = 0
Query:   14 GILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVGGHYDGGCFDAVLREGGKLGKAMLSEPKLVNCERTKANYLREISSRTYPTTCSTKMSALGFEKAWQTFIDTQASPQEKQRFYQEVGGSTFIERCFVAPAKEMSAETLGDIIETLAEAITMEEGGKREDSAENGLAPAFRGDLVRLLYILPGMGRFSVTFALLTPTQATTARKLV 265
            G  D   L+KEL  A+EED +  L D  KKRAI T  SY++F++ V  A L+P+S K++QN+++  R                        R  G   K++L      + + +KA  L        P   S +     F + W+    TQ   ++K ++ Q V     + + F A   E+ ++ +  I+  L+            D  +  LA A+    + LL  +   GRF +T + LT  QA +   LV
Sbjct:    7 GAFDTAALQKELVIALEEDRKYKLTDDMKKRAIHTAASYDDFRNFVLCADLKPVSSKELQNLSKSERK-----------------------RNRGYQTKSLL------HVDTSKAKTLVGKQDAAVPPATSVE-----FIRTWRRSCLTQ---RDKYKYLQ-VTTPPRVAKLFQA---ELDSDLMLQIVACLSAQFVNLNPNNDVDDYQLELAHAWFT--LSLLEAVTKTGRFLLTMSFLTADQAASVIHLV 215          
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|1173943324|gb|OQR92192.1| (hypothetical protein ACHHYP_03970 [Achlya hypogyna])

HSP 1 Score: 64.3142 bits (155), Expect = 1.579e-8
Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 0
Query:   13 SGILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTR 80
            SG  D   L+KEL +A+EED +    D  KKRAI T  SY+EF++ V  A L+P+S K++QN+++  R
Sbjct:    6 SGAFDTASLQKELVQALEEDRKYKATDEMKKRAIHTASSYDEFKNFVLCADLKPVSSKELQNLSKSER 73          
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|325179813|emb|CCA14216.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 62.3882 bits (150), Expect = 1.031e-7
Identity = 29/82 (35.37%), Postives = 55/82 (67.07%), Query Frame = 0
Query:    9 VIDGSGILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKN 90
            +++  G+L++R L++EL EA+E D      D  KKRAI T  +Y+EF++RVA A+++P++ K+++ +++     +N   RK+
Sbjct:    6 LLNEDGVLNVRALERELAEAIEYDRVYKRTDEVKKRAIHTSANYDEFKNRVACANMKPITTKELKELSKPRSLSTNLAYRKS 87          
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|669143076|ref|XP_008607100.1| (hypothetical protein SDRG_03248 [Saprolegnia diclina VS20] >gi|530741586|gb|EQC39828.1| hypothetical protein SDRG_03248 [Saprolegnia diclina VS20])

HSP 1 Score: 61.6178 bits (148), Expect = 1.271e-7
Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 0
Query:   14 GILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTR 80
            G  D   L+KEL +A++ED +    D  KKRAI T  SY+EF++ V  A L+P+S K++QN+++  R
Sbjct:    7 GTFDTASLQKELAQALDEDRKYKATDEMKKRAIHTAASYDEFKNFVLCADLKPVSSKELQNLSKSER 73          
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|635371099|emb|CCI40755.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 62.003 bits (149), Expect = 1.451e-7
Identity = 30/84 (35.71%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    9 VIDGSGILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVG 92
            ++   G+L++R L+KEL EA+E D      D  KKRAI T  +Y+EF++RVA A+++P++ K+++ V + +R  S  ++ + + 
Sbjct:    6 LLSEDGVLNVRALEKELAEAIEFDRVYKRTDEVKKRAIHTSANYDEFKNRVACANMKPITSKELKEVFK-SRSLSTNLSYRKLA 88          
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|635371100|emb|CCI40756.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 61.6178 bits (148), Expect = 1.838e-7
Identity = 30/84 (35.71%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    9 VIDGSGILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVG 92
            ++   G+L++R L+KEL EA+E D      D  KKRAI T  +Y+EF++RVA A+++P++ K+++ V + +R  S  ++ + + 
Sbjct:   19 LLSEDGVLNVRALEKELAEAIEFDRVYKRTDEVKKRAIHTSANYDEFKNRVACANMKPITSKELKEVFK-SRSLSTNLSYRKLA 101          
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|260807673|ref|XP_002598633.1| (hypothetical protein BRAFLDRAFT_118362 [Branchiostoma floridae] >gi|229283906|gb|EEN54645.1| hypothetical protein BRAFLDRAFT_118362 [Branchiostoma floridae])

HSP 1 Score: 60.8474 bits (146), Expect = 2.355e-7
Identity = 67/255 (26.27%), Postives = 111/255 (43.53%), Query Frame = 0
Query:   15 ILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIR-TVGSYEEFQHRVAYAHLRPLSRKD-IQNVAQDTRGFSNAIARKNVGGHYDGGCFDAVLREGGKLGKAMLSEPKLVNCERTKANYLREISSRTYPTTCSTKMSALG--FEKAWQTFIDTQASPQEKQRFYQEVGGSTFIERCFVAPAKEMSAETLGDIIETLAEAITMEEGGKREDSAENGLAPAFRGDLVRLLYILPGMGRFSVTFALLTPTQATTARKLV 265
            +LD RKL++EL  A+E DH+    + AK RAI+  VGSY+EF+  V  +HLRPL +KD +QN+  D +   N  A     G                            N  +T+     E            K+   G  F + W+ +  T  +P +K +F +++GG    E  F     E+S   LG+I+  L ++   E+ G                 + ++L  L  +GRF ++   L+  ++  A++L+
Sbjct:   11 VLDFRKLERELAAAVEADHKYQRENDAKFRAIKQQVGSYDEFRDIVMASHLRPLEKKDNLQNM--DIKQPWNVHASTQADGQ---------------------------NAAQTQIQQDEE------------KLPKNGHEFARDWKRYCKT--TP-DKYKFIKKIGGEKLAE-IF---KTEISFGLLGEILTALNDSYVQEDSGF----------------VYQVLDGLTKVGRFELSVDFLSSKESQAAKELL 201          
The following BLAST results are available for this feature:
BLAST of EWM25179.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106835|gb|EWM25179.1|0.000e+0100.00hypothetical protein Naga_101071g1 [Nannochloropsi... [more]
gi|1173945841|gb|OQR94425.1|1.095e-926.43hypothetical protein THRCLA_22237, partial [Thraus... [more]
gi|673019460|ref|XP_008863691.1|7.804e-924.51hypothetical protein H310_02074 [Aphanomyces invad... [more]
gi|698783413|ref|XP_009824750.1|1.363e-826.59hypothetical protein H257_02699 [Aphanomyces astac... [more]
gi|1173943324|gb|OQR92192.1|1.579e-845.59hypothetical protein ACHHYP_03970 [Achlya hypogyna... [more]
gi|325179813|emb|CCA14216.1|1.031e-735.37conserved hypothetical protein [Albugo laibachii N... [more]
gi|669143076|ref|XP_008607100.1|1.271e-743.28hypothetical protein SDRG_03248 [Saprolegnia dicli... [more]
gi|635371099|emb|CCI40755.1|1.451e-735.71unnamed protein product [Albugo candida][more]
gi|635371100|emb|CCI40756.1|1.838e-735.71unnamed protein product [Albugo candida][more]
gi|260807673|ref|XP_002598633.1|2.355e-726.27hypothetical protein BRAFLDRAFT_118362 [Branchiost... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5508rna5508Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications