EWM25179.1, cds5494 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|585106835|gb|EWM25179.1| (hypothetical protein Naga_101071g1 [Nannochloropsis gaditana]) HSP 1 Score: 605.905 bits (1561), Expect = 0.000e+0 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
Query: 1 MKFSTRTSVIDGSGILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVGGHYDGGCFDAVLREGGKLGKAMLSEPKLVNCERTKANYLREISSRTYPTTCSTKMSALGFEKAWQTFIDTQASPQEKQRFYQEVGGSTFIERCFVAPAKEMSAETLGDIIETLAEAITMEEGGKREDSAENGLAPAFRGDLVRLLYILPGMGRFSVTFALLTPTQATTARKLVRQSVREEGQDKEEGRQGLMEVWSPYIA 292
MKFSTRTSVIDGSGILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVGGHYDGGCFDAVLREGGKLGKAMLSEPKLVNCERTKANYLREISSRTYPTTCSTKMSALGFEKAWQTFIDTQASPQEKQRFYQEVGGSTFIERCFVAPAKEMSAETLGDIIETLAEAITMEEGGKREDSAENGLAPAFRGDLVRLLYILPGMGRFSVTFALLTPTQATTARKLVRQSVREEGQDKEEGRQGLMEVWSPYIA
Sbjct: 1 MKFSTRTSVIDGSGILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVGGHYDGGCFDAVLREGGKLGKAMLSEPKLVNCERTKANYLREISSRTYPTTCSTKMSALGFEKAWQTFIDTQASPQEKQRFYQEVGGSTFIERCFVAPAKEMSAETLGDIIETLAEAITMEEGGKREDSAENGLAPAFRGDLVRLLYILPGMGRFSVTFALLTPTQATTARKLVRQSVREEGQDKEEGRQGLMEVWSPYIA 292
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|1173945841|gb|OQR94425.1| (hypothetical protein THRCLA_22237, partial [Thraustotheca clavata]) HSP 1 Score: 67.781 bits (164), Expect = 1.095e-9 Identity = 74/280 (26.43%), Postives = 115/280 (41.07%), Query Frame = 0
Query: 14 GILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVGGHYDGGCFDAVLREGGKLGKAM--LSEPKLVNCERTKANYLREISSRTYPTTCSTKMSALGFEKAWQTFIDTQASPQEKQRFYQEVGGSTFIERCFVAPAKEMSAETLGDIIETLAEAITMEEGGKREDSAEN-----GLAPAFRGDLVRLLYILPGMG---RFSVTFALLTPTQATTARKLVRQSVREEGQDKEEGRQGL 283
G D L+KEL A+EED + D KKRAI T GSY+EF++ V A L P++ K++QN+++ R + +K + RE KL A + PK T A +L R + CS+ +AL +E T +P+ R +Q E+ A+ +I++ +A+++T D E G A A I +G R + + L+P Q RK ++ Q+ EE QG
Sbjct: 7 GTFDTEALQKELVNALEEDRKYKATDEMKKRAIHTAGSYDEFRNFVLCADLNPVTSKELQNLSKSQRQPNRLYKKK------------SQTRERVKLLNATDNFAIPK------TSAEFL-----RNWKRNCSS--NALKYEYLVLT------TPERLGRLFQ----------------AEIEADLFVNIVDCMADSLTNLNPNNELDDYEREQERVGFAFA----------IFQAIGTTRRLGLMLSFLSPDQVEKLRKFLQTLETLLNQENEECVQGF 229
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|673019460|ref|XP_008863691.1| (hypothetical protein H310_02074 [Aphanomyces invadans] >gi|574480605|gb|ETW07598.1| hypothetical protein H310_02074 [Aphanomyces invadans]) HSP 1 Score: 65.4698 bits (158), Expect = 7.804e-9 Identity = 62/253 (24.51%), Postives = 112/253 (44.27%), Query Frame = 0
Query: 14 GILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVGGHYDGGCFDAVLREGGKLGKAMLSEPKLVNCERTKANYLREISSRTYPTTCSTKMSALGFEKAWQTFIDTQASPQEKQRFYQEVGGSTFIERCFVAPAKEMSAETLGDIIETL-AEAITMEEGGKREDSAENGLAPAFRGDLVRLLYILPGMGRFSVTFALLTPTQATTARKLV 265
G D L+KEL A+EED + L D KKRAI T SY++F++ V A L+P+S K++QN+++ R K + ++ +V+ ++K + E+ + P T ++ F + W+ TQ + + Y +V +++ F A E+ ++ + I+ L A+ + + +D F + +L GRF++T + T +QATT +LV
Sbjct: 7 GAFDTAALQKELALALEEDRKYKLTDEMKKRAIHTAASYDDFRNFVLCADLKPVSSKELQNLSKSER----------------------------KRNRMYQAKTAVVDTTKSK-TLVGELDAAVPPAT------SVEFLRTWRRSCVTQDAKYK----YLQVTTPERLQKLFHA---ELDSDLMLQIVACLNAQFVNLNPNNDVDDFETEHAHACFT---LAMLEAATKTGRFALTVSFWTSSQATTVAQLV 214
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|698783413|ref|XP_009824750.1| (hypothetical protein H257_02699 [Aphanomyces astaci] >gi|574120800|gb|ETV86278.1| hypothetical protein H257_02699 [Aphanomyces astaci]) HSP 1 Score: 64.6994 bits (156), Expect = 1.363e-8 Identity = 67/252 (26.59%), Postives = 108/252 (42.86%), Query Frame = 0
Query: 14 GILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVGGHYDGGCFDAVLREGGKLGKAMLSEPKLVNCERTKANYLREISSRTYPTTCSTKMSALGFEKAWQTFIDTQASPQEKQRFYQEVGGSTFIERCFVAPAKEMSAETLGDIIETLAEAITMEEGGKREDSAENGLAPAFRGDLVRLLYILPGMGRFSVTFALLTPTQATTARKLV 265
G D L+KEL A+EED + L D KKRAI T SY++F++ V A L+P+S K++QN+++ R R G K++L + + +KA L P S + F + W+ TQ ++K ++ Q V + + F A E+ ++ + I+ L+ D + LA A+ + LL + GRF +T + LT QA + LV
Sbjct: 7 GAFDTAALQKELVIALEEDRKYKLTDDMKKRAIHTAASYDDFRNFVLCADLKPVSSKELQNLSKSERK-----------------------RNRGYQTKSLL------HVDTSKAKTLVGKQDAAVPPATSVE-----FIRTWRRSCLTQ---RDKYKYLQ-VTTPPRVAKLFQA---ELDSDLMLQIVACLSAQFVNLNPNNDVDDYQLELAHAWFT--LSLLEAVTKTGRFLLTMSFLTADQAASVIHLV 215
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|1173943324|gb|OQR92192.1| (hypothetical protein ACHHYP_03970 [Achlya hypogyna]) HSP 1 Score: 64.3142 bits (155), Expect = 1.579e-8 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 0
Query: 13 SGILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTR 80
SG D L+KEL +A+EED + D KKRAI T SY+EF++ V A L+P+S K++QN+++ R
Sbjct: 6 SGAFDTASLQKELVQALEEDRKYKATDEMKKRAIHTASSYDEFKNFVLCADLKPVSSKELQNLSKSER 73
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|325179813|emb|CCA14216.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 62.3882 bits (150), Expect = 1.031e-7 Identity = 29/82 (35.37%), Postives = 55/82 (67.07%), Query Frame = 0
Query: 9 VIDGSGILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKN 90
+++ G+L++R L++EL EA+E D D KKRAI T +Y+EF++RVA A+++P++ K+++ +++ +N RK+
Sbjct: 6 LLNEDGVLNVRALERELAEAIEYDRVYKRTDEVKKRAIHTSANYDEFKNRVACANMKPITTKELKELSKPRSLSTNLAYRKS 87
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|669143076|ref|XP_008607100.1| (hypothetical protein SDRG_03248 [Saprolegnia diclina VS20] >gi|530741586|gb|EQC39828.1| hypothetical protein SDRG_03248 [Saprolegnia diclina VS20]) HSP 1 Score: 61.6178 bits (148), Expect = 1.271e-7 Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 0
Query: 14 GILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTR 80
G D L+KEL +A++ED + D KKRAI T SY+EF++ V A L+P+S K++QN+++ R
Sbjct: 7 GTFDTASLQKELAQALDEDRKYKATDEMKKRAIHTAASYDEFKNFVLCADLKPVSSKELQNLSKSER 73
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|635371099|emb|CCI40755.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 62.003 bits (149), Expect = 1.451e-7 Identity = 30/84 (35.71%), Postives = 55/84 (65.48%), Query Frame = 0
Query: 9 VIDGSGILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVG 92
++ G+L++R L+KEL EA+E D D KKRAI T +Y+EF++RVA A+++P++ K+++ V + +R S ++ + +
Sbjct: 6 LLSEDGVLNVRALEKELAEAIEFDRVYKRTDEVKKRAIHTSANYDEFKNRVACANMKPITSKELKEVFK-SRSLSTNLSYRKLA 88
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|635371100|emb|CCI40756.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 61.6178 bits (148), Expect = 1.838e-7 Identity = 30/84 (35.71%), Postives = 55/84 (65.48%), Query Frame = 0
Query: 9 VIDGSGILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIRTVGSYEEFQHRVAYAHLRPLSRKDIQNVAQDTRGFSNAIARKNVG 92
++ G+L++R L+KEL EA+E D D KKRAI T +Y+EF++RVA A+++P++ K+++ V + +R S ++ + +
Sbjct: 19 LLSEDGVLNVRALEKELAEAIEFDRVYKRTDEVKKRAIHTSANYDEFKNRVACANMKPITSKELKEVFK-SRSLSTNLSYRKLA 101
BLAST of EWM25179.1 vs. NCBI_GenBank
Match: gi|260807673|ref|XP_002598633.1| (hypothetical protein BRAFLDRAFT_118362 [Branchiostoma floridae] >gi|229283906|gb|EEN54645.1| hypothetical protein BRAFLDRAFT_118362 [Branchiostoma floridae]) HSP 1 Score: 60.8474 bits (146), Expect = 2.355e-7 Identity = 67/255 (26.27%), Postives = 111/255 (43.53%), Query Frame = 0
Query: 15 ILDMRKLKKELKEAMEEDHRLSLVDAAKKRAIR-TVGSYEEFQHRVAYAHLRPLSRKD-IQNVAQDTRGFSNAIARKNVGGHYDGGCFDAVLREGGKLGKAMLSEPKLVNCERTKANYLREISSRTYPTTCSTKMSALG--FEKAWQTFIDTQASPQEKQRFYQEVGGSTFIERCFVAPAKEMSAETLGDIIETLAEAITMEEGGKREDSAENGLAPAFRGDLVRLLYILPGMGRFSVTFALLTPTQATTARKLV 265
+LD RKL++EL A+E DH+ + AK RAI+ VGSY+EF+ V +HLRPL +KD +QN+ D + N A G N +T+ E K+ G F + W+ + T +P +K +F +++GG E F E+S LG+I+ L ++ E+ G + ++L L +GRF ++ L+ ++ A++L+
Sbjct: 11 VLDFRKLERELAAAVEADHKYQRENDAKFRAIKQQVGSYDEFRDIVMASHLRPLEKKDNLQNM--DIKQPWNVHASTQADGQ---------------------------NAAQTQIQQDEE------------KLPKNGHEFARDWKRYCKT--TP-DKYKFIKKIGGEKLAE-IF---KTEISFGLLGEILTALNDSYVQEDSGF----------------VYQVLDGLTKVGRFELSVDFLSSKESQAAKELL 201 The following BLAST results are available for this feature:
BLAST of EWM25179.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|