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Properties
| Property Name | Value |
|---|
| Product | ion transport protein |
| Orig transcript id | gnl|cribi|Naga_100527g3.3197.mrna |
| Orig protein id | gnl|cribi|Naga_100527g3.3197 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:144193..145234 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5507 ID=rna5507|Name=rna5507|organism=Nannochloropsis gaditana|type=mRNA|length=2924bp
CAATGAATCTTTATCAGAATGCTTTAAACATGCGAAATATGCCCCCCAAA
AAACATAGAGGAGGTTTTTTGTGCGATTTCAAATTGAAGTCGGCGTCTCC
TTTCTTTGGTTGCTGTTGCCACCGAACAAACTCACATTGACCTGATTTGT
TTCAATACGTACGTCAAACACGCAGAATAAAGATAAATGTACTGATAACG
AGGAGACTATGTCACATTTTAGGGATATGCGTCGTCTACCGCGTCTCTGT
GCAGACAAACAGGGCTCCTTGAAGACCGTCATTCCCCTTCTGTTTCTGTC
TAGTGCATCAAGTTTCGCGTCACGATCTGCCTCTTGCTGCTTCAGGACCT
ACGCGGCTGTATGTGCTGTCCTTCTGGCCTCATTTACCTGCCAATCAGCT
CTTGCATTTGCATGGGGCCCCCCAATGTCGTCGTCGCACTCTCTTTTGGG
AAGTCAAATTAGCAGCAGCCTCGTACATGACTACCATTCGCGGAGGATGC
TGGTGTGGCAATCGTCGGAATCTTTGGATTTCCACAAGGAGAAAGTGTAC
GGCATGCATGACTCATTTGAAGGGCGTGCTGCTTCGTCGACGGTATGGGA
AAAGGACTCGGCGGAGGAGGAAAAGCGACGGGCATCCCACAATGAGAAGC
AAGCAAGTGTATTTGACGAAGCAGCGCAGTAAGTGATCGGAGAGAAGAAT
GATTTGAAAATGCTTGGGTAAACTTGCGGAAGACGTGTTGAAAAAAGTGC
GTAAGGGACAGAAAGGAGAGGAAAGGAGAGGAAAGTGGAGCAGCCATGTG
GGAAGGAAGAAGTACGAAGCATCTATGAATAGGACTGCACTGTAGTGTAA
GAAACTGACAAGTGCGCCTATCCTGGTACTTTGACCGGCTTATTTCCCTC
CTCGCAGATTTTTTTTCCAGCGAGGAAGCGACCCCTGAGGACGTTATCCC
TCGTCTCCGACGCATCGCCGAGGCTGCTGCCCTCCGTCCCACCGATCGTG
TCCTCGACGTGGGCACAGGGACCGGGGCCCTCCTCCCCTTCCTCCTTCCC
TACCTGGACGAAAACGCCGGAGAGAAGCGCATTGTCGGGATGGATCTCTC
CGCGGGCATGTTGGTGGTGGCGAGGGAGAGGTTTCCGCGTGCGTCCTTTT
GGCAGGGGGACGTTCTTGATCTCCCCGTGATATACGAGCGGGAGGGGGGG
AAGGAGGAAGGGCTGTTCACCGCCGTGTTTTTCAACGCCTGCTTTGGAAA
CGTCTTTGACCAGGCACGAGCCCTCCGGGAAGTGGGCAAGCTGGTCAAAA
AAGGCGGCCGGGTGGTCATTTCTCATCCTTTAGGTGCCGATTTCGTGGAA
GAATTGCGGCGGCGTTCCCCCTCCGTCGTGCTCGCGGACCTTCCCAGGGA
CGAAAAGGCGTGGAGGGTAGGGAAGGAGGGGAGAGAGAGAGGGAGGGACG
GAGGGAGGGCGGGAAGGAGGGAAAGAAGGAACAGGGATGACATGTGGTCA
CGGGGTCGTTCCTCGTCTTTCCTTTCCCTGCTCCCAACCATTCCCTCCTT
TCCCTTCTTGCCCTGCTCCTTCTTCCAGGACATTCTGGTCACAACACCCT
TTCAGCTTACCTCGCTGCAGTCAACATCTTCCCTCTACCTCGCCCTCCTT
TGCCGTCGGCCTGATCAACCCCTCCCTCAGGCGCTCCTCCTCCAAGGACC
AGTCAGTCAAGGATACAAACGCGGAAGCAAAAAACTGGGCTTCCCCACCG
CCAACCTCCCATCCTCGCTTTTTGTCGTCAAATCGCTCATAGAAGATATT
CCCGTGGGTGTCTATTGCGGTTGGGCTCGTGTAGTTGGGCGTGAGTGTAA
GGCAGTGGTGAATATTGGGTACTCCCCTACATTCCAGGGGGAGGAGAACA
GGGAGAAGATTGTAGAGGCGCATTTGATTGACGGCGCTTTTCCCGGAGAT
TTCTACGGGGAGTTAATGACATTGATTCTCACAGGGTTCCTACGGCCCGA
GCAGAAATTTCCGAGCTTCCCTGCCTTAGTAGCAGCTATCCAGCAGGACG
TGGAAGACGCCAGGGTGGCGATGGACTTGCCTGTGTATGCAGGGGCGAAG
CGATTGGTAGAGGAAGAAGGGGAGGGCACAGGGGAAGAGGAGAGAGGAAA
TGGAGCGTCGAAGGGGAAAGGGAGGTGGGTGCCGTTTGAGGAGTGGGGTC
CCAGATAATGCTGTAAGTCGAAAAGTTTGTCATCTTTGTGCGTCGTCGTC
ATCATTGTCACCGACTCAAGCTTTAATTTGCGTAGAGACTAAGATGGACA
CAGTTGTTTCTTTATCCACCTACTGTGCTGAAACGCTCGAGAAGGGTTGT
TCAAGAAAAAGCGGAAAGTTGGTGAAATAATGCAGGGTAGGTATGAAGGT
TAAGAGTCGGCTGTCTCCACGTTAATCGACACAGCACAATGTACACGCGG
GAAATGATTGAGAAGAGCATCCTGCTCAAAGCCTACCAAACCAGAATGGA
CGGGGAAGTAAAAGCATAGGCAATGGTAGTTCTGGCAAAGCAACTCGGGG
ACTCCACAAGCATACCCGGAGGAGATGATTACGACGACTATTTCAATTTG
ACCTATCCCACTAGAATTGCGACCTTGCCCAAAGTTTCCAAGGCCCCTTG
ATCTTACTTTTGGCTATTGACATGAAGCTTTGCATGGTTTGCAATGGGAG
AATCCCAAGTGCCGCTGAGAGTTGTTTCTGCTGTTTGCATGCAAGTATCT
TTCTGTACTTCCGATGTGACGTACGTGTGTATCTCTTCCTCCAATGGCAA
TACATGAGAAAAACACGCCGTGCCGCAGTCAAGTATGTACCTCGCATAAG
ACGCATGTACTCAAGGACGTAGCCGTATGCGAGTTGTTCGAGACGGCAAT
GTTGACCACAGCTTTTTCTTTTGG back to topprotein sequence of rna5507 >rna5507-protein ID=rna5507-protein|Name=rna5507|organism=Nannochloropsis gaditana|type=polypeptide|length=312bp
MKAPGKPFHARFANVPPSVNTPNSTTTSTTSINYDVASSPVRLNAFASRL
ATSSTVASSSKRIAFLPFVQRLERVIFQGIPPTYPLRAKMKITLDTTSFG
MAWDIFQSLASLLSCITYVASTYHYIFPLFLQWTLTIIFSCELLLRYYVS
ENRWAHTFEFFTLIDLLTVLPMYIQFIVAHTGTPMAGHRSLFFLRFARTM
NIMRIVRTFRFGGVRRMPKSTRQCSILGLTVVSLVFLSAGLVQLVERDLT
FGRAVYFMIVTMSTVGYGDIHPTRYADFLLPPARPPSLPLFYSSFLMTSV
QYSFTSSHHLSL back to topmRNA from alignment at CM002466.1:144193..145234+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5507 ID=rna5507|Name=rna5507|organism=Nannochloropsis gaditana|type=mRNA|length=1042bp|location=Sequence derived from alignment at CM002466.1:144193..145234+ (Nannochloropsis gaditana)
AAGCATTGCGCCTTCTACAGGTTCCTCATAAGAAGCCTACGAGGTTGATC
TTAGCCTGCGAATTGCAAAACTAAGCGCGAACGTCTCGTGATCGAGCATC
TCGATGAAAGCCCCTGGAAAGCCTTTCCATGCCCGATTTGCAAACGTGCC
ACCGTCGGTCAATACTCCAAATTCTACAACAACAAGCACGACTAGCATCA
ATTATGACGTAGCGTCCTCGCCCGTGCGTCTGAATGCATTCGCTTCCCGA
CTTGCCACGTCGTCCACCGTGGCATCTTCTTCCAAACGCATCGCTTTTTT
ACCCTTTGTACAACGCTTGGAGCGCGTTATCTTCCAAGGGATTCCACCAA
CCTACCCTTTACGTGCCAAGATGAAGATCACCCTGGACACCACCTCCTTT
GGTATGGCTTGGGATATTTTCCAGTCTCTGGCCAGCCTACTTTCATGCAT
CACTTATGTGGCCTCCACGTACCATTacatctttcctctttttctgcaAT
GGACGCTTACGATTATATTCTCCTGCGAGCTTCTACTGCGCTACTACGTC
TCGGAGAATCGATGGGCCCACACCTTTGAATTCTTCACCCTGATAGACTT
GTTGACCGTCCTTCCCATGTATATTCAATTTATCGTCGCACACACGGGAA
CGCCCATGGCGGGCCACAgatccctcttctttctccgctttGCCCGCACC
ATGAACATTATGCGGATCGTCCGTACCTTCCGTTTCGGTGGGGTCCGGCG
GATGCCGAAATCCACCCGACAGTGCTCCATTTTGGGCCTCACGGTCGTCT
CCCTGGTTTTCCTCTCTGCGGGCTTGGTGCAGTTGGTCGAGCGGGATCTG
ACGTTTGGGAGGGCAGTGTACTTTATGATCGTGACCATGAGCACGGTTGG
CTACGGGGACATCCATCCCACCAGGTATGCtgactttctcctccctcctg
cccgccctccctccctgcctctcttctactcttccttcctcatgacCTCA
GTCCAATATTCCTTTACATCAAGTCATCACCTGTCCCTCTAA back to topCoding sequence (CDS) from alignment at CM002466.1:144193..145234+ >rna5507 ID=rna5507|Name=rna5507|organism=Nannochloropsis gaditana|type=CDS|length=939bp|location=Sequence derived from alignment at CM002466.1:144193..145234+ (Nannochloropsis gaditana)
ATGAAAGCCCCTGGAAAGCCTTTCCATGCCCGATTTGCAAACGTGCCACC
GTCGGTCAATACTCCAAATTCTACAACAACAAGCACGACTAGCATCAATT
ATGACGTAGCGTCCTCGCCCGTGCGTCTGAATGCATTCGCTTCCCGACTT
GCCACGTCGTCCACCGTGGCATCTTCTTCCAAACGCATCGCTTTTTTACC
CTTTGTACAACGCTTGGAGCGCGTTATCTTCCAAGGGATTCCACCAACCT
ACCCTTTACGTGCCAAGATGAAGATCACCCTGGACACCACCTCCTTTGGT
ATGGCTTGGGATATTTTCCAGTCTCTGGCCAGCCTACTTTCATGCATCAC
TTATGTGGCCTCCACGTACCATTacatctttcctctttttctgcaATGGA
CGCTTACGATTATATTCTCCTGCGAGCTTCTACTGCGCTACTACGTCTCG
GAGAATCGATGGGCCCACACCTTTGAATTCTTCACCCTGATAGACTTGTT
GACCGTCCTTCCCATGTATATTCAATTTATCGTCGCACACACGGGAACGC
CCATGGCGGGCCACAgatccctcttctttctccgctttGCCCGCACCATG
AACATTATGCGGATCGTCCGTACCTTCCGTTTCGGTGGGGTCCGGCGGAT
GCCGAAATCCACCCGACAGTGCTCCATTTTGGGCCTCACGGTCGTCTCCC
TGGTTTTCCTCTCTGCGGGCTTGGTGCAGTTGGTCGAGCGGGATCTGACG
TTTGGGAGGGCAGTGTACTTTATGATCGTGACCATGAGCACGGTTGGCTA
CGGGGACATCCATCCCACCAGGTATGCtgactttctcctccctcctgccc
gccctccctccctgcctctcttctactcttccttcctcatgacCTCAGTC
CAATATTCCTTTACATCAAGTCATCACCTGTCCCTCTAA back to top
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