EWM25180.1, cds5493 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25180.1 vs. NCBI_GenBank
Match: gi|585106840|gb|EWM25180.1| (ion transport protein [Nannochloropsis gaditana]) HSP 1 Score: 631.713 bits (1628), Expect = 0.000e+0 Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0
Query: 1 MKAPGKPFHARFANVPPSVNTPNSTTTSTTSINYDVASSPVRLNAFASRLATSSTVASSSKRIAFLPFVQRLERVIFQGIPPTYPLRAKMKITLDTTSFGMAWDIFQSLASLLSCITYVASTYHYIFPLFLQWTLTIIFSCELLLRYYVSENRWAHTFEFFTLIDLLTVLPMYIQFIVAHTGTPMAGHRSLFFLRFARTMNIMRIVRTFRFGGVRRMPKSTRQCSILGLTVVSLVFLSAGLVQLVERDLTFGRAVYFMIVTMSTVGYGDIHPTRYADFLLPPARPPSLPLFYSSFLMTSVQYSFTSSHHLSL 312
MKAPGKPFHARFANVPPSVNTPNSTTTSTTSINYDVASSPVRLNAFASRLATSSTVASSSKRIAFLPFVQRLERVIFQGIPPTYPLRAKMKITLDTTSFGMAWDIFQSLASLLSCITYVASTYHYIFPLFLQWTLTIIFSCELLLRYYVSENRWAHTFEFFTLIDLLTVLPMYIQFIVAHTGTPMAGHRSLFFLRFARTMNIMRIVRTFRFGGVRRMPKSTRQCSILGLTVVSLVFLSAGLVQLVERDLTFGRAVYFMIVTMSTVGYGDIHPTRYADFLLPPARPPSLPLFYSSFLMTSVQYSFTSSHHLSL
Sbjct: 1 MKAPGKPFHARFANVPPSVNTPNSTTTSTTSINYDVASSPVRLNAFASRLATSSTVASSSKRIAFLPFVQRLERVIFQGIPPTYPLRAKMKITLDTTSFGMAWDIFQSLASLLSCITYVASTYHYIFPLFLQWTLTIIFSCELLLRYYVSENRWAHTFEFFTLIDLLTVLPMYIQFIVAHTGTPMAGHRSLFFLRFARTMNIMRIVRTFRFGGVRRMPKSTRQCSILGLTVVSLVFLSAGLVQLVERDLTFGRAVYFMIVTMSTVGYGDIHPTRYADFLLPPARPPSLPLFYSSFLMTSVQYSFTSSHHLSL 312
BLAST of EWM25180.1 vs. NCBI_GenBank
Match: gi|695446461|ref|XP_009534487.1| (hypothetical protein PHYSODRAFT_521894 [Phytophthora sojae] >gi|348669804|gb|EGZ09626.1| hypothetical protein PHYSODRAFT_521894 [Phytophthora sojae]) HSP 1 Score: 137.502 bits (345), Expect = 1.683e-32 Identity = 79/207 (38.16%), Postives = 115/207 (55.56%), Query Frame = 0
Query: 76 IFQGIPPTYPLRAKMKITLDTTSFGMAWDIFQSLASLLSCITYVASTY----HYIFPLFLQWTLTIIFSCELLLRYYVSENRWAHTFEFFTLIDLLTVLPMYIQFIVAHTGTPMAGHRSLFFLRFARTMNIMRIVRTFRFGGVRRMPKSTRQCSILGLTVVSLVFLSAGLVQLVER------DLTFGRAVYFMIVTMSTVGYGDIHP 272
+FQGIP YPLR ++++ L + G AW+IFQ++ +LL TYV TY P F T I+F+ + L Y ENRW F ++D LT+ P +V GT +SL F+RF R M ++R++R R G + + +Q + L L+F++AG+ VE DLTFG A+YF++VT++TVGYGDI P
Sbjct: 30 VFQGIPSHYPLRTRVRMKLKFSKLGTAWEIFQTVFALLVSATYVVQTYEPHDEGQMPTF-DTTSMIVFASDYFLNLYCCENRWQFVFSVNGIMDALTIFPA----LVDQFGTGYG--KSLPFIRFVRVMRMLRLIRVVRVAGSQTVSAVQKQVYTIILLTTCLIFVAAGIFHAVEGNEGAQPDLTFGEALYFIVVTIATVGYGDIVP 229
BLAST of EWM25180.1 vs. NCBI_GenBank
Match: gi|669137292|ref|XP_008604214.1| (hypothetical protein SDRG_00512 [Saprolegnia diclina VS20] >gi|530744549|gb|EQC42791.1| hypothetical protein SDRG_00512 [Saprolegnia diclina VS20]) HSP 1 Score: 136.732 bits (343), Expect = 3.147e-32 Identity = 78/210 (37.14%), Postives = 119/210 (56.67%), Query Frame = 0
Query: 77 FQGIPPTYPLRAKMKITLDTTSFGMAWDIFQSLASLLSCITYVASTYHYIFPL-FLQWTLTIIFSCELLLRYYVSENRWAHTFEFFTLIDLLTVLPMYIQFIVAHTGTPMAGHR-----SLFFLRFARTMNIMRIVRTFRFGGVRRMPKSTRQCSILGLTVVSLVFLSAGLVQLVE---RD-----LTFGRAVYFMIVTMSTVGYGDIHP 272
F GIP + LR +++I L+ +S G AWD+FQ++ SL++C Y+ +Y+ L L T +F+ + L+R+Y +ENR F F +ID+L ++P F TP + R + F RF R + +M+ ++ R R+ +Q + LGL V S++F+SA L Q VE RD L+ G A YF++VT+STVGYGDI P
Sbjct: 42 FHGIPKGFSLRTRVRIKLENSSVGQAWDLFQTMTSLVACGLYIVQSYNGEVRLSALDMTFITVFAADYLMRFYCAENRILFPFTFNAIIDVLAIIPSLYDFTTT-ASTPSSAPRTHAQPTFAFFRFVRVLRVMKAIQLSRTSSHHRISAVQKQLAGLGLLVTSILFISACLFQTVENYARDINDEQLSLGDAFYFILVTISTVGYGDIAP 250
BLAST of EWM25180.1 vs. NCBI_GenBank
Match: gi|813155563|ref|XP_012201376.1| (hypothetical protein SPRG_07194 [Saprolegnia parasitica CBS 223.65] >gi|641533954|gb|KDO27920.1| hypothetical protein SPRG_07194 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 135.191 bits (339), Expect = 1.070e-31 Identity = 74/206 (35.92%), Postives = 117/206 (56.80%), Query Frame = 0
Query: 77 FQGIPPTYPLRAKMKITLDTTSFGMAWDIFQSLASLLSCITYVASTYH-YIFPLFLQWTLTIIFSCELLLRYYVSENRWAHTFEFFTLIDLLTVLPMYIQFIVAHTGTPMAGHRSLF-FLRFARTMNIMRIVRTFRFGGVRRMPKSTRQCSILGLTVVSLVFLSAGLVQLVE---RD-----LTFGRAVYFMIVTMSTVGYGDIHP 272
F GIP + LR +++I L+ + G AWD+FQ++ SL++C Y+ +Y+ + L T +F+ + L+R+Y +E+R F F +ID+L ++P F +P + F F RF R + +M+ ++ R RR+ +Q + L L V S++F+SA L Q VE RD L+ G A YF++VT+STVGYGDI P
Sbjct: 42 FHGIPKGFSLRTRVRIKLENSPVGQAWDLFQTITSLVACGLYIVQSYNDQVRSSALDMTFIAVFAADYLIRFYCAEDRVLFPFTFNAIIDVLAIIPSLYDFTTTSLASPRTHAQPTFAFFRFVRVLRVMKAIQLSRTSSHRRISAVQKQLAGLALLVTSILFISACLFQTVENYARDMDDEQLSLGDAFYFILVTISTVGYGDIAP 247
BLAST of EWM25180.1 vs. NCBI_GenBank
Match: gi|673046383|ref|XP_008877152.1| (hypothetical protein H310_12025 [Aphanomyces invadans] >gi|574467366|gb|ETV94390.1| hypothetical protein H310_12025 [Aphanomyces invadans]) HSP 1 Score: 135.191 bits (339), Expect = 1.071e-31 Identity = 81/216 (37.50%), Postives = 121/216 (56.02%), Query Frame = 0
Query: 76 IFQGIPPTYPLRAKMKITLDTTSFGMAWDIFQSLASLLSCITYVASTYH--YIFPLFLQWTLTIIFSCELLLRYYVSENRWAHTFEFFTLIDLLTVLPMYIQFIVAHTGTPMAGHRSLF-FLRFARTMNIMRIVRTFRFGGVRRMPKSTRQCSILGLTVVSLVFLSAGLVQLVE----------------RDLTFGRAVYFMIVTMSTVGYGDIHP 272
+F GIP + LR +++I L+T+ G AWD+FQ+L SL++C V +YH + P + + +IF+ + LR Y ++NR F F +IDLL V P ++ + T G R F FLRF R + IM+ ++ R +++ +Q LGL V S+VF+SA L QLVE R++T G + YF++VT+STVGYGDI P
Sbjct: 57 LFHGIPKGFSLRTRVRIKLETSDSGYAWDMFQTLVSLVACAVCVVQSYHDDVVVPE-VDLSFGVIFATDYCLRLYCAKNRLLFPFTFSAIIDLLAVAPTIYDYVTRDSSTNPTGQRPKFAFLRFVRVLRIMKAIQMSRHSATKQITAIQQQLLSLGLLVTSIVFISACLFQLVENSYRDPIVLPNGETVDRNVTLGDSFYFIMVTISTVGYGDIAP 271
BLAST of EWM25180.1 vs. NCBI_GenBank
Match: gi|570321594|gb|ETO69542.1| (hypothetical protein F444_13905 [Phytophthora parasitica P1976]) HSP 1 Score: 131.339 bits (329), Expect = 2.248e-30 Identity = 76/206 (36.89%), Postives = 112/206 (54.37%), Query Frame = 0
Query: 77 FQGIPPTYPLRAKMKITLDTTSFGMAWDIFQSLASLLSCITYVASTYHYI---FPLFLQWTLTIIFSCELLLRYYVSENRWAHTFEFFTLIDLLTVLPMYIQFIVAHTGTPMAGH-RSLFFLRFARTMNIMRIVRTFRFGGVRRMPKSTRQCSILGLTVVSLVFLSAGLVQLVERD------LTFGRAVYFMIVTMSTVGYGDIHP 272
F GIP YPLR ++++ L + G AW+IFQ+L +LL YV TY + P F T I+F+ + L Y ENRW ++D LT+ P + I GH +SL F+RF R M ++R++R R G + + +Q + L L+F++AG+ VE + LTFG A+YF++VT++TVGYGDI P
Sbjct: 31 FHGIPSHYPLRTRVRMKLKFSKLGTAWEIFQTLFALLVSAAYVIQTYMPLDGRVPTF-DATAMIVFAADYFLNLYCCENRWQFITSVNGIMDALTIFPALVDQI-------DDGHSKSLPFIRFVRVMRMLRLIRVVRVAGSQTVSAVQKQVYTIILLTTCLIFVAAGIFHAVESNDGAQPHLTFGEALYFIVVTIATVGYGDIAP 228
BLAST of EWM25180.1 vs. NCBI_GenBank
Match: gi|675200819|ref|XP_008909294.1| (hypothetical protein PPTG_14081 [Phytophthora parasitica INRA-310] >gi|568090486|gb|ETN05319.1| hypothetical protein PPTG_14081 [Phytophthora parasitica INRA-310]) HSP 1 Score: 131.339 bits (329), Expect = 2.403e-30 Identity = 76/206 (36.89%), Postives = 112/206 (54.37%), Query Frame = 0
Query: 77 FQGIPPTYPLRAKMKITLDTTSFGMAWDIFQSLASLLSCITYVASTYHYI---FPLFLQWTLTIIFSCELLLRYYVSENRWAHTFEFFTLIDLLTVLPMYIQFIVAHTGTPMAGH-RSLFFLRFARTMNIMRIVRTFRFGGVRRMPKSTRQCSILGLTVVSLVFLSAGLVQLVERD------LTFGRAVYFMIVTMSTVGYGDIHP 272
F GIP YPLR ++++ L + G AW+IFQ+L +LL YV TY + P F T I+F+ + L Y ENRW ++D LT+ P + I GH +SL F+RF R M ++R++R R G + + +Q + L L+F++AG+ VE + LTFG A+YF++VT++TVGYGDI P
Sbjct: 31 FHGIPSHYPLRTRVRMKLKFSKLGTAWEIFQTLFALLVSAAYVIQTYMPLDGRVPTF-DATAMIVFAADYFLNLYCCENRWQFITSVNGIMDALTIFPALVDQI-------DDGHSKSLPFIRFVRVMRMLRLIRVVRVAGSQTVSAVQKQVYTIILLTTCLIFVAAGIFHAVESNDGAQPHLTFGEALYFIVVTIATVGYGDIAP 228
BLAST of EWM25180.1 vs. NCBI_GenBank
Match: gi|566017954|gb|ETI40865.1| (hypothetical protein F443_13871 [Phytophthora parasitica P1569] >gi|567955317|gb|ETK80950.1| hypothetical protein L915_13513 [Phytophthora parasitica] >gi|567983995|gb|ETL34375.1| hypothetical protein L916_13409 [Phytophthora parasitica] >gi|568013468|gb|ETL87645.1| hypothetical protein L917_13219 [Phytophthora parasitica] >gi|568043593|gb|ETM40874.1| hypothetical protein L914_13313 [Phytophthora parasitica] >gi|570945376|gb|ETP10633.1| hypothetical protein F441_13801 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 131.339 bits (329), Expect = 2.513e-30 Identity = 76/206 (36.89%), Postives = 112/206 (54.37%), Query Frame = 0
Query: 77 FQGIPPTYPLRAKMKITLDTTSFGMAWDIFQSLASLLSCITYVASTYHYI---FPLFLQWTLTIIFSCELLLRYYVSENRWAHTFEFFTLIDLLTVLPMYIQFIVAHTGTPMAGH-RSLFFLRFARTMNIMRIVRTFRFGGVRRMPKSTRQCSILGLTVVSLVFLSAGLVQLVERD------LTFGRAVYFMIVTMSTVGYGDIHP 272
F GIP YPLR ++++ L + G AW+IFQ+L +LL YV TY + P F T I+F+ + L Y ENRW ++D LT+ P + I GH +SL F+RF R M ++R++R R G + + +Q + L L+F++AG+ VE + LTFG A+YF++VT++TVGYGDI P
Sbjct: 31 FHGIPSHYPLRTRVRMKLKFSKLGTAWEIFQTLFALLVSAAYVIQTYMPLDGRVPTF-DATAMIVFAADYFLNLYCCENRWQFITSVNGIMDALTIFPALVDQI-------DDGHSKSLPFIRFVRVMRMLRLIRVVRVAGSQTVSAVQKQVYTIILLTTCLIFVAAGIFHAVESNDGAQPHLTFGEALYFIVVTIATVGYGDIAP 228
BLAST of EWM25180.1 vs. NCBI_GenBank
Match: gi|570977107|gb|ETP38787.1| (hypothetical protein F442_13708 [Phytophthora parasitica P10297]) HSP 1 Score: 131.339 bits (329), Expect = 2.661e-30 Identity = 76/206 (36.89%), Postives = 112/206 (54.37%), Query Frame = 0
Query: 77 FQGIPPTYPLRAKMKITLDTTSFGMAWDIFQSLASLLSCITYVASTYHYI---FPLFLQWTLTIIFSCELLLRYYVSENRWAHTFEFFTLIDLLTVLPMYIQFIVAHTGTPMAGH-RSLFFLRFARTMNIMRIVRTFRFGGVRRMPKSTRQCSILGLTVVSLVFLSAGLVQLVERD------LTFGRAVYFMIVTMSTVGYGDIHP 272
F GIP YPLR ++++ L + G AW+IFQ+L +LL YV TY + P F T I+F+ + L Y ENRW ++D LT+ P + I GH +SL F+RF R M ++R++R R G + + +Q + L L+F++AG+ VE + LTFG A+YF++VT++TVGYGDI P
Sbjct: 31 FHGIPSHYPLRTRVRMKLKFSKLGTAWEIFQTLFALLVSAAYVIQTYMPLDGRVPTF-DATAMIVFAADYFLNLYCCENRWQFITSVNGIMDALTIFPALVDQI-------DDGHSKSLPFIRFVRVMRMLRLIRVVRVAGSQTVSAVQKQVYTIILLTTCLIFVAAGIFHAVESNDGAQPHLTFGEALYFIVVTIATVGYGDIAP 228
BLAST of EWM25180.1 vs. NCBI_GenBank
Match: gi|301113226|ref|XP_002998383.1| (Voltage-gated Ion Channel (VIC) Superfamily [Phytophthora infestans T30-4] >gi|262111684|gb|EEY69736.1| Voltage-gated Ion Channel (VIC) Superfamily [Phytophthora infestans T30-4]) HSP 1 Score: 127.102 bits (318), Expect = 6.841e-29 Identity = 75/210 (35.71%), Postives = 111/210 (52.86%), Query Frame = 0
Query: 77 FQGIPPTYPLRAKMKITLDTTSFGMAWDIFQSLASLLSCITYVASTYHYI---FPLFLQWTLTIIFSCELLLRYYVSENRWAHTFEFFTLIDLLTVLPMYIQFIVAHTGTPMAGH-RSLFFLRFARTMNIMRIVRTFRFGGVRRMPKSTRQCSILGLTVVSLVFLSAGLVQLVERD------LTFGRAVYFMIVTMSTVGYGDIHPTRYA 276
F GIP YPLR ++++ L + G AW+IFQ+ +LL YV TY + P F ++FS + L Y ENRW ++D LT+ P + I GH +SL F+RF R M ++R++R R G + + +Q + L L+F++AG+ VE + LTFG A+YF++VT++TVGYGDI P A
Sbjct: 31 FHGIPIHYPLRTQVRMKLKFSKLGTAWEIFQTFFALLVSAAYVVQTYMPLDGRVPTF-DAVAMVVFSADYFLNLYCCENRWQFITSVNGIMDALTIFPALVDQI-------DDGHSKSLPFIRFVRVMRMLRLIRVVRVAGSQTVSAVQKQVYTIILLTTCLIFVAAGIFHAVESNDGAQPHLTFGEALYFIVVTIATVGYGDIVPVTSA 232 The following BLAST results are available for this feature:
BLAST of EWM25180.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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