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Properties
| Property Name | Value |
|---|
| Product | potassium sodium efflux p-type atpase |
| Orig transcript id | gnl|cribi|Naga_101857g2.1989.mrna |
| Orig protein id | gnl|cribi|Naga_101857g2.1989 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:134801..135340 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5503 ID=rna5503|Name=rna5503|organism=Nannochloropsis gaditana|type=mRNA|length=5093bp
CCAGGCTCTGGGCCTCGCCTGTGAGCCGCCAGAGGTGGACAGCATGCAGA
AGGATCCGGTCGAGAAAGGCCGACTTCTGCGAAATCCGACGCTCCTGGTC
GACATCTCCTTGTACGGCTTTCTGATCGGGGTCTTATCCATCACGAACTT
CCTCATCGTCGCCTTTGTGGACGGAGACGGGGTTCAGCACACGAGCGGCT
GCAATTTGACGCTGACCCCGGAATGTGAACATATTTTCCGAGCACGGGCC
GCCTGTTTTGCCTCTACCACCTTGCTCCTCCTCCTCCACGCGTACAATTG
CAAGGATCTCGCCCGGTCGCTCCGGAGAGTGAAGTACAAGAACAACAAGC
CTCTCGCCCTGGCCGTCGGTCTCGGCGTCTTCACCCTCCTCCCGACCTTC
TACATCCCCTACGTCCACGACAAAGTCTTCTACCAGGCGCCCATCGACTG
GGAATGGGGCTTGGTCCTGGGGTCGGTTCTGGTCTTCCTCCTCCTTTCCG
AGGCCTACAAGAGGTACTTGCGGCCCCTTGTCGTGCAATGGGACCAGGCA
CTCGCCCACCAAAGGAAGGAGCGGAGGATGCATGTGATCGAGCTTGTGGA
CGGCGGGGAGCGGGTGGAGAAGGTGGTGCCGAAAGAGGGCGGGAAGGAGG
GGGGAATGATGCAACGGGTGTTTAGGAGGGAGGGGAGCAGTTTTGGTGTT
CGAAGTGGGTGGGAGGAGGATGAGGAAACTGAGGAGGAGATGAAGAAAGA
GGAGGCGGCGGCGGTGATAGAAGATCATGTTATGTAAGGGAAAATTCACC
GAAGTGGAGAGAGGGAGACCTTGATACATTATGATTCAAAATCTAGATAG
GATGATAAATGAAAGAGAAAGGGGGAGAAAATGTGAAGATGGTCGATGTT
TTTCCCTTGATGTTTTTTCCCATGATGAAAGAAATTGTCAGCGGAGAACG
AGGGGCCTCACAGCTTCATATAGGGTTATGGTGTGCTCACTTGTGACGGT
ACACAGGTCGCTAGGCGAAAGAGAAAGGTGCATCTCATGATTGACGATAT
TAATATTATTATCTTTTTTTGGTAGTACAAAGGGAGGTGTGAAGAATGGA
CTCAGTGCAACGGCGAGGAGAGAGGGAAAGGAAAGACAAAGTAAGACTAC
GAGACCAGCTCGGGGAGAAATGGAAGAAGCAATGCCATGGAGACCGACAG
CAAGTGCATTTAAATCGGACTTCCAAGAGGGAGAACAAAGAAAAAGAGAA
GAGTGAAGAGATGGATGGAAAATGACGAGAGTGGAACACATTTTAGGCAT
TCATCGATCTGGATGATGACTTGAGAGATCGATTTGGGTCGGGCATGAAG
AGAGGACAAAGCAAGCTTGAGAGGCTTTTGAATTCTACCCTATTTTTTGT
TTTAGTCAGGTAAACTCCTTGGGAAAATTGTTTAAAGTCTTCAACTCCAC
CTGAGGACCATCATCGGCCCATGGTACGGAACACGTCTGTGTGCGATACA
TAATGGCAATGACAAGAGCAGGTGTCTATCCACCAAGACGTGATTGAGAG
TTACGGAGATTATTCAGACGGCACATGCTATCTGGAGGGACCACTCCTAC
ACCGATCATAAAAGTCAATTGTAGTAGTCACTTTCTTGAAAACCTCCTCT
TAAGATCGTCACACTTCTCAGATTGAGGATATCGCTTCAATTGTCATATT
TATCGTGTCCTTTGATTAAAACTTGTCCTGATATTCTCATTATGTCGTCT
GTTATATCTTTCGACATTTTTCCTACAACGCTTGCCAAAGGATCCCGACT
CTTCTTCTTGCTAGAATCCCTACTTGCTCTATGTCAGCAGTATGTCTGGA
AGTGTGATCCGTCTATCCTTTTTTTGGAAATTATGTTCGTCCTGCATCGG
TGTGCATGTGTGTGTAAGCGTGTGTAGGAGTGTGGTCTTATGTATGTTGT
AAGTTATTCACAACTACGTAAGTATAAGCTCTTGTCGGAGTTCGCACTAG
TGTACTCTGTTTTTGGGGGCCTTCGTCTGCACCTGTATTTGTATCTGTAT
CTGTCCCTTTATGCTTGCTTGTTTCTGTGTTTTGGTTGCTTTTGTGTGCT
TATATGACCATCTGCCTATATTATTTGTGTGTGACTCTGTGTGTAGAAAT
TTGGGCGGAATAATACAGTTTGTGTCTCTCTATGTGGTACACCTCTGTGT
TTTAAGTGTGTTACATTGTATGTGTCCGAGCTTCGTGTTTCTCAATTTAG
CTGTATGCCTGTCTCTTTATGTTTGTCTCTGTATGTAAAGCCTGAGCGTT
TTATTCAGGTTATTCATTTCTATGTAGGGACCTGAAAGTGAACGTACACG
GGTGTGTATTGTCTGTTTGCCTCTCTATGGTTCCGTGAATGCTATGTTGT
ATAAAACGTATGGGACTATGCGTACGCCTTGCTGGTTGTAGGTATCTGTC
TTGTGGACTCATTGTCCTTCTGCAAAGAAAGACATTTTGGCGTGTTCTCG
TGCGTAGACGTGCGCTCTCATATGTGTGGTTGCACCTGGGGGTACCTGTC
TGTCTGACAGTTCAGGTGTGTTTACATGAGTAATTTGCCTGCGCCTGAGT
ATTTCATTCTTTGTGTGCATGTTTTCAAGTATATGTCTGCGTGCGCTCCT
TTTGTGTTGCTGTGTGCTCGTGTCTATGTTTGGATATATTCTTTGCCAAG
TAACGTGATTCCAAGTATTTTATCCTTCTTTCATCTGTCAGGACAAGGCC
AGCTTTTTATGTCAACCTCTCTTCTATCCACTTCCTTCCTTTCTACATAA
ACTTACTTCCGCGGAATATACTCTTCTTTTTTCTTTTGTTGCGAAGTATG
ATGAAAGGAGTTGTGCTATGAGCTGTGCGTCTTTTTTGAAAGAGACTCAC
AAAATGAAGTGTTCCCTGGAGACATTCTTTAGTGAACAATGTTTTGTCAC
TTTAAGCCTCTTTTTGTATCATATCCTCGACAAATTCGAAGACTTAATGT
CGAGCTTCCTCTTTTCTTCCACAAGCACATTTTTCCTTCTCCTCTTTCCG
TTCCTACCTCGTCTGACTCCTTTCCCTTATCCTCTTAATCAAGACACGCC
AGAACCGACTCCCCTACTTCCTTCCAGGCCTCAAGCGCTACCTGTAACCT
CTCGCAAGCGGCGAAAGCCTCGGTCGCTCGGGCTTTGAGCAGGACAGGCG
CTGCTGAATACTCGAATTTTTTCATCTTACCTGCCTCTTGGCTATTTACG
GGTCCTGGGAGGTTATAAGGACCAGCATGTGCTGTCTGTTGAGGAGAAGT
CCCATGCTTGCAGACCTTGACAGGTCTCGGTGCGAGAGAATTACTGCTTC
CTGTACTCACTCGACGCCGTGCACGTGCTACACTATCATTCCGTCCGTCT
TGTTTCTCAGCAACCTTCGCCTCGCCCGAGATTCCTTCCTCAAGCTCTGC
CTCACCCTTAGTAATGGTCTCCAAAGCCTGTTTCACTTTCTTTGGTGAAA
ATTTTCGGTCTTTCCCTGATTTTTGGTCTTCACACCTACGTTTCAATTGC
GTTTTTTTGTGCTCTTCTGCTTCGTTTCCTTCGCTCTTTACCCTTTCCAC
TTGTCTTGTCAACTTCCCCTCAACTTCGTCTTTCGAAAGCTCTTCTCCTC
GTGACGTCACATTTTCTCCTTTACCGTCAATTTTCTTGTCTATCTTTATC
CTTTCCACATGTTTCCGAATTTTCTCGTTATTCTCGCTTCCCCTTTTGGT
CTGCTTTTGTCGCCCCCTATCTGCGGGGAAATGCTCGAGCTCCACACACT
TATTGGAAACTTTTGCTTTGATGCCACCATTTGTCTTCCGCCCTCCTTCG
CTTCCATCTTCCCATCCGGAGGGCAGAATGAGCAGATTTCTGGCACCATT
CTTTCTGCATCGTCCCTCCTTTCTACGCAAGACGTTATCGTGCCGCCCTT
CGGTCGTCGGTTGCTTTCTCGCTTCCTCCGTATCATGTTCCTGACTGGTG
TCCCTCATTTCTTCTGCCACATCCTGGCTGTTGTACCTCTTCTTTTTCCT
TTCGGCTCCAAGTCCCGCAAACACATCCAAGGCCTCCGTTGCCAACACAC
TTGAGGTATCATGGCCCGCTCTCATCCCGTGCTTCCCCCCCGCTTTCCCT
CTTTCCCTCCATTCTTCACTTGTGTGCGCTACATGATTTTTGAAGAGGGG
CTTGAGTGGTCGGGCGACTTGCTTTCTCTCAGTGCGACATTCTCCACCGT
TCCTCCTTTCCTTCTCAAATTCATCTATTTTCCATTCCTCGTCTTCGGCC
TGAGTCGCTTCCTCCATCAAATCCCGCACAGAGAGAATGGATTTCTTCCC
ACTATCTTTCTCACACTCCTTCCCTCCTACCCGCCCTTCATTTGCCCCTC
CCCGGCCTCCTCGTGTTAGGTAGAGAAGCATTGCGTGAGTCGAAGCGACG
GAGGCTTTCATAAATCTCGTGGCTTCGGGCGACCATGCGCCACCGTTTTC
TCTCCGAGCAGCGCTACCACCCTTTGCTTCGCCCTTACTGCCCTTCTGAT
CGCTATTATTCTCCTCAGTATTTTCTTTTTCCTTCTTCTCCTTCTCATCC
AGCATTTCCAGTAGCTCTCCATCTTCAGCCTCAGGGTGGCTCCTCGTTTT
TTCGTTTCCTTTTTCGAAGTCGGCGTCTTCAAGTTGGTGCTTCCGCAGCT
TTCCATTCAAAAAGACTCTAAGGTCCTCCATTTTCCTTTGACTCCTGAAC
TCCACAGTGAACGAGACCCTTCCTGTATCTCTCTCTCTCTCATTCCCACT
TCCCCGCCTCCCGACGCGAGAAATGCTTCGATCGGAAGCAAAATAGCCCA
CAGACGAGGAAGAACAAAGATGAGGCGGGAGGGAAGAAAGGCAAGATGGG
GGAAACGGGCCAAGCAGGGCATTCCGGATGGGGACATCGTCGTAGGAGAA
GGTCATGGTCGGCCGGAGGGACGTGGATACGGAGGAAGGAAGAAAATGCA
CCCTCTTGAGTTTGGAGTAGGCTAAAAAAATGTCTGTTTCCTCTTTCTCT
TCCCCTGCCTCCTCCTCGTCCTTTCCTTTCCGATCGCGGACCT back to topprotein sequence of rna5503 >rna5503-protein ID=rna5503-protein|Name=rna5503|organism=Nannochloropsis gaditana|type=polypeptide|length=128bp
MGKCGSDVTKKAADIIIMDDHFATIEHAVEEGRRIGTNVVKFVCHLMSGN
VGEVITLMIGLSFRGMDGRSVYPLSTLQILWINMITSTPPVHPSSSSLPP
SIPSSLASFFFCLRLRPYHLHLTPLPIL back to topmRNA from alignment at CM002466.1:134801..135340- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5503 ID=rna5503|Name=rna5503|organism=Nannochloropsis gaditana|type=mRNA|length=540bp|location=Sequence derived from alignment at CM002466.1:134801..135340- (Nannochloropsis gaditana)
CCCCCGTCCCTGCCTCTGACATGCTTATTCTCTCCTTCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
TCAGGTGACGGAGTGAACGACGCGCCGTCCTTGCGAGCCGCGGATGTGGG
CATTGCCATGGGGAAGTGCGGAAGCGACGTGACCAAAAAAGCCGCAGACA
TCATCATCATGGACGATCACTTTGCGACCATCGAGCACGCAGTGGAGGAA
GGCCGGCGGATCGGCACCAACGTGGTCAAATTCGTCTGCCATTTGATGAG
TGGGAATGTGGGCGAAGTCATCACCCTTATGATCGGCTTGTCCTTTCGCG
GCATGGACGGCCGAAGTGTCTACCCTCTCTCGACGCTACAAATCTTGTGG
ATCAACATGATCACCTCCACGCCACCGGTACACCCCTCTTCTTCCTCCCT
CCCTCCCTCCATCCCTTCCTCCCTTGCTTCTTTCTTTTTCTGTCTTCGCC
TGCGCCCTTATCATCTTCACCTCACGCCTCTTCCCATCCT back to topCoding sequence (CDS) from alignment at CM002466.1:134801..135340- >rna5503 ID=rna5503|Name=rna5503|organism=Nannochloropsis gaditana|type=CDS|length=383bp|location=Sequence derived from alignment at CM002466.1:134801..135340- (Nannochloropsis gaditana)
ATGGGGAAGTGCGGAAGCGACGTGACCAAAAAAGCCGCAGACATCATCAT
CATGGACGATCACTTTGCGACCATCGAGCACGCAGTGGAGGAAGGCCGGC
GGATCGGCACCAACGTGGTCAAATTCGTCTGCCATTTGATGAGTGGGAAT
GTGGGCGAAGTCATCACCCTTATGATCGGCTTGTCCTTTCGCGGCATGGA
CGGCCGAAGTGTCTACCCTCTCTCGACGCTACAAATCTTGTGGATCAACA
TGATCACCTCCACGCCACCGGTACACCCCTCTTCTTCCTCCCTCCCTCCC
TCCATCCCTTCCTCCCTTGCTTCTTTCTTTTTCTGTCTTCGCCTGCGCCC
TTATCATCTTCACCTCACGCCTCTTCCCATCCT back to top
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