EWM25184.1, cds5489 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25184.1 vs. NCBI_GenBank
Match: gi|585106845|gb|EWM25184.1| (potassium sodium efflux p-type atpase, partial [Nannochloropsis gaditana]) HSP 1 Score: 261.922 bits (668), Expect = 1.184e-88 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
Query: 1 MGKCGSDVTKKAADIIIMDDHFATIEHAVEEGRRIGTNVVKFVCHLMSGNVGEVITLMIGLSFRGMDGRSVYPLSTLQILWINMITSTPPVHPSSSSLPPSIPSSLASFFFCLRLRPYHLHLTPLPIL 128
MGKCGSDVTKKAADIIIMDDHFATIEHAVEEGRRIGTNVVKFVCHLMSGNVGEVITLMIGLSFRGMDGRSVYPLSTLQILWINMITSTPPVHPSSSSLPPSIPSSLASFFFCLRLRPYHLHLTPLPIL
Sbjct: 1 MGKCGSDVTKKAADIIIMDDHFATIEHAVEEGRRIGTNVVKFVCHLMSGNVGEVITLMIGLSFRGMDGRSVYPLSTLQILWINMITSTPPVHPSSSSLPPSIPSSLASFFFCLRLRPYHLHLTPLPIL 128
BLAST of EWM25184.1 vs. NCBI_GenBank
Match: gi|1183372145|gb|ORX97929.1| (potassium/sodium efflux P-type ATPase [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 123.635 bits (309), Expect = 3.510e-30 Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 0
Query: 1 MGKCGSDVTKKAADIIIMDDHFATIEHAVEEGRRIGTNVVKFVCHLMSGNVGEVITLMIGLSFRGMDGRSVYPLSTLQILWINMITSTPPV--------HPSSSSLPPSIPSS 105
MG GSDV K+A+DI++ DD+FATI AVEEGRRI N+ KFV HLMSGNV EVI L+IGL F G +VYP+S +QIL++NM+TS+PP +P + +PP P+S
Sbjct: 703 MGMAGSDVAKQASDIVLTDDNFATIVRAVEEGRRIFANIQKFVLHLMSGNVSEVIALVIGLCFADSSGLTVYPMSPVQILFLNMVTSSPPAMALGLEPNNPLTMRMPPRSPTS 815
BLAST of EWM25184.1 vs. NCBI_GenBank
Match: gi|1183505514|gb|ORZ29062.1| (putative Na P-type ATPase [Lobosporangium transversale]) HSP 1 Score: 122.479 bits (306), Expect = 7.348e-30 Identity = 58/116 (50.00%), Postives = 82/116 (70.69%), Query Frame = 0
Query: 1 MGKCGSDVTKKAADIIIMDDHFATIEHAVEEGRRIGTNVVKFVCHLMSGNVGEVITLMIGLSFRGMDGRSVYPLSTLQILWINMITSTPP-----VHPSSSSLPPSIPSSLASFFF 111
MG+ GSDV K+AADI++ DD+FATI HAV EGRRI N+ KF+ HL+S NV E++ L++GL+ + DG++V+P+S +QIL++NMITS+PP + P+S S P S F
Sbjct: 709 MGQSGSDVAKQAADIVLTDDNFATIVHAVAEGRRIFANIQKFISHLLSTNVAEIVVLIVGLAIKDDDGQAVFPMSAVQILFLNMITSSPPAMGLGLEPASESNMHEPPRSAKQGLF 824
BLAST of EWM25184.1 vs. NCBI_GenBank
Match: gi|1032647952|gb|OAQ29248.1| (calcium-transporting ATPase 3 [Mortierella elongata AG-77]) HSP 1 Score: 122.094 bits (305), Expect = 1.239e-29 Identity = 61/118 (51.69%), Postives = 83/118 (70.34%), Query Frame = 0
Query: 1 MGKCGSDVTKKAADIIIMDDHFATIEHAVEEGRRIGTNVVKFVCHLMSGNVGEVITLMIGLSFRGMDGRSVYPLSTLQILWINMITSTPPVH------PSSSSL---PPSIPSSLASF 109
MG+ GSDV K+AADI++ DD+FATI AV EGRR+ N+ KFV HLMS NV E++ L+IGL F+ DG++V+P+S ++IL++NMITS+PP PS S++ P S L SF
Sbjct: 704 MGQSGSDVAKQAADIVLTDDNFATIVQAVAEGRRMFANIQKFVQHLMSANVAEIVVLIIGLVFKDDDGKAVFPMSAVEILFLNMITSSPPAMGLGLEPPSESNMREPPRSAKQGLFSF 821
BLAST of EWM25184.1 vs. NCBI_GenBank
Match: gi|89885325|emb|CAJ42021.1| (P-Type II D ATPase [Rhizophagus intraradices]) HSP 1 Score: 121.709 bits (304), Expect = 1.600e-29 Identity = 62/115 (53.91%), Postives = 82/115 (71.30%), Query Frame = 0
Query: 1 MGKCGSDVTKKAADIIIMDDHFATIEHAVEEGRRIGTNVVKFVCHLMSGNVGEVITLMIGLSFRGMDGRSVYPLSTLQILWINMITSTPP-----VHPSSSSLPPSIPSSLASFF 110
MG GSDV K+A+DI++ DD+FATI +A+ EGRRI +N+ KF+ HL+SGN GE++TL+IGLSF DG SV P+S LQIL++NMITS+PP V +SS + P S F
Sbjct: 498 MGLGGSDVAKQASDIVLSDDNFATIVNAIAEGRRIFSNIQKFILHLLSGNSGEIVTLIIGLSFIDSDGISVNPMSPLQILFLNMITSSPPAMGLGVERASSDIMRYPPRSKGGLF 612
BLAST of EWM25184.1 vs. NCBI_GenBank
Match: gi|595458167|gb|EXX62354.1| (Na(+)-exporting P-type ATPase ENA2 [Rhizophagus irregularis DAOM 197198w]) HSP 1 Score: 121.324 bits (303), Expect = 1.795e-29 Identity = 62/115 (53.91%), Postives = 82/115 (71.30%), Query Frame = 0
Query: 1 MGKCGSDVTKKAADIIIMDDHFATIEHAVEEGRRIGTNVVKFVCHLMSGNVGEVITLMIGLSFRGMDGRSVYPLSTLQILWINMITSTPP-----VHPSSSSLPPSIPSSLASFF 110
MG GSDV K+A+DI++ DD+FATI +A+ EGRRI +N+ KF+ HL+SGN GE++TL+IGLSF DG SV P+S LQIL++NMITS+PP V +SS + P S F
Sbjct: 722 MGLGGSDVAKQASDIVLSDDNFATIVNAIAEGRRIFSNIQKFILHLLSGNSGEIVTLIIGLSFIDSDGISVNPMSPLQILFLNMITSSPPAMGLGVERASSDIMRYPPRSKGGLF 836
BLAST of EWM25184.1 vs. NCBI_GenBank
Match: gi|552926598|gb|ESA10501.1| (hypothetical protein GLOINDRAFT_97285, partial [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 121.324 bits (303), Expect = 2.163e-29 Identity = 62/115 (53.91%), Postives = 82/115 (71.30%), Query Frame = 0
Query: 1 MGKCGSDVTKKAADIIIMDDHFATIEHAVEEGRRIGTNVVKFVCHLMSGNVGEVITLMIGLSFRGMDGRSVYPLSTLQILWINMITSTPP-----VHPSSSSLPPSIPSSLASFF 110
MG GSDV K+A+DI++ DD+FATI +A+ EGRRI +N+ KF+ HL+SGN GE++TL+IGLSF DG SV P+S LQIL++NMITS+PP V +SS + P S F
Sbjct: 560 MGLGGSDVAKQASDIVLSDDNFATIVNAIAEGRRIFSNIQKFILHLLSGNSGEIVTLIIGLSFIDSDGISVNPMSPLQILFLNMITSSPPAMGLGVERASSDIMRYPPRSKGGLF 674
BLAST of EWM25184.1 vs. NCBI_GenBank
Match: gi|552926591|gb|ESA10494.1| (hypothetical protein GLOINDRAFT_29393, partial [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 120.939 bits (302), Expect = 2.219e-29 Identity = 55/90 (61.11%), Postives = 74/90 (82.22%), Query Frame = 0
Query: 1 MGKCGSDVTKKAADIIIMDDHFATIEHAVEEGRRIGTNVVKFVCHLMSGNVGEVITLMIGLSFRGMDGRSVYPLSTLQILWINMITSTPP 90
MG GSDV K+A+DI++ DD+FATI +A+ EGRRI +N+ KF+ HL+SGN GE++TL+IGLSF DG SV P+S LQIL++NM+TS+PP
Sbjct: 433 MGLGGSDVAKQASDIVLSDDNFATIVNAIAEGRRIFSNIQKFILHLLSGNAGEIVTLIIGLSFIDSDGISVNPMSPLQILFLNMVTSSPP 522
BLAST of EWM25184.1 vs. NCBI_GenBank
Match: gi|1183499211|gb|ORZ22855.1| (P-type II D ATPase [Lobosporangium transversale]) HSP 1 Score: 121.324 bits (303), Expect = 2.227e-29 Identity = 62/118 (52.54%), Postives = 82/118 (69.49%), Query Frame = 0
Query: 1 MGKCGSDVTKKAADIIIMDDHFATIEHAVEEGRRIGTNVVKFVCHLMSGNVGEVITLMIGLSFRGMDGRSVYPLSTLQILWINMITSTPPVH------PSSSSL---PPSIPSSLASF 109
MG+ GSDV K+AADI++ DD+FATI A+ EGRR+ N+ KFV HLMS NV EV+ L+IGL F+ DG SV+P+S ++IL++NMITS+PP PS S++ P S L SF
Sbjct: 501 MGQSGSDVAKQAADIVLTDDNFATIVKAIAEGRRMFANIQKFVQHLMSANVAEVVLLVIGLVFQDRDGHSVFPMSAVEILFLNMITSSPPAMGLGLEPPSESNMREPPRSAKQGLFSF 618
BLAST of EWM25184.1 vs. NCBI_GenBank
Match: gi|89885327|emb|CAJ42022.1| (P-type II D ATPase [Rhizophagus intraradices]) HSP 1 Score: 120.939 bits (302), Expect = 2.601e-29 Identity = 55/90 (61.11%), Postives = 74/90 (82.22%), Query Frame = 0
Query: 1 MGKCGSDVTKKAADIIIMDDHFATIEHAVEEGRRIGTNVVKFVCHLMSGNVGEVITLMIGLSFRGMDGRSVYPLSTLQILWINMITSTPP 90
MG GSDV K+A+DI++ DD+FATI +A+ EGRRI +N+ KF+ HL+SGN GE++TL+IGLSF DG SV P+S LQIL++NM+TS+PP
Sbjct: 499 MGLGGSDVAKQASDIVLSDDNFATIVNAIAEGRRIFSNIQKFILHLLSGNAGEIVTLIIGLSFIDSDGISVNPMSPLQILFLNMVTSSPP 588 The following BLAST results are available for this feature:
BLAST of EWM25184.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|