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Properties
| Property Name | Value |
|---|
| Product | potassium sodium efflux p-type atpase |
| Orig transcript id | gnl|cribi|Naga_100146g11.3720.mrna |
| Orig protein id | gnl|cribi|Naga_100146g11.3720 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:129341..134668 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5502 ID=rna5502|Name=rna5502|organism=Nannochloropsis gaditana|type=mRNA|length=1958bp
CACCTAGATAGTGAAATATACAATGAAACGGAAGGCATATAAGATGAACG
CTTTATTGGCACTCTGCGGGAATTCAAGAGAGCAAGACGAGGGCCGAAAA
GGGACCGTGGCCGATGGCGGTGACATCAAGCTGCAGAAAGATAGTAAGGA
GAATGGGGTGCAGGAAGAGGACGAAAGGGACGTTGATTTGTATAAGGAGG
TGAAAGCCGGCCTGGGGGTGTTTACAGATGCAAGAAAGATAAGGGAAGCG
GAAGAAGGCAAGGGAGGCCTGAGGGGGCGGGAAACGAGAGAGGGAGCAAC
CGTTCTGTCAGCAGGAAAAGAAGCCGCCTTGTCCACAATGGAAAGCAAGA
AAGCTTTGAGAGCCAGCCTCTGCGAAGACAACCAAGAAGATAAAATGGCC
AGAGGGAAAGGCAAGACGACCTACCGATTGGCTCAGAGAGGAGACCGACC
GGCTCCGAGAGGTGGAACCTGCCTGGAATGCAAGACCAGCAAGGTAAAAT
GCGATAAAGTACAACCGCGATGCACCCGATGTGCCCGCCACGGCTTCCTT
TGTATCCCCCAGACTCGAGGTCAGGGACGCCCGGCAAAGTGGAGGATGTA
CCTGGCGGAGGACGCTGCGATCCAGAAGGAAGGGGACCTGTGGAACGCCC
ACTCGAAAGCTCTCTTGCTGAGCGCGGCACAAGCTCGGTCCAAGGAAGAG
TCCATCTCGGCGTCGTCAGACCCTGTGCGTCCTGCATACCTCCCGCCGTC
CGGGCTTCCCGGCTTGACCTCCACCACGCGTGGAACGTCTTTGCCAGCTT
CCCCGCCTCTCCCCGCCTCTTTGAGCCCTCCTCTCTCCGATATCACGGGT
GTTTCATCCTCCTTCCGTCCTCCTCACTCCCAATTTTCGTCCTCTTTTTT
GACGCGGGCTTCGGGCAAGAGACAAATGCCTCCTTGTAGCGAGGCGGAGG
ATCGTCTGGTGGCGGCCCGGTCGCTCAAATGCTTGAAGAACGGGGATGCC
TCCCCCTTCCCCCCTCCCCACCCTATTGTCGGCTCCACCTCTCGTCCCGT
CCACCCCTCCTTCCCTTCCTTCGCTACCGTCGCGGGGACCAGGGGTGCAG
TGGACAGAAACAACTACCTCGGCAACGGCATGGGTGGCTATTACAGCCAT
GGCTACCCTGGCAGCACGCAACCAAATCGACCGTATTCCACACCCCTGCG
GGATATGAGTCTTGGCACCACGGATAGGGTCTCCTACGTCCCACCCAACG
ACATTTTCCTCGACCCCGTCTTTCCCCGCTGCCCTCCTTCGGCCCATTTT
TCTACGCTGCAGCACCCTTGCTACATGGGGAAGCCAGTCACCCCTCCCTT
TGTCCCGTCCATGGGAGCCCCTCCTTCCCATCCTCCCCTTCATTCGTCGT
GGGCACCAGCACTACAGCCTGGGGGCAAATTTGTACCTGTCGGTGCCCCC
ATGACTATTTCTGAATGGCTGGGGAAGGGAATGGATGGCTGGAGGCAACG
TTAGAAGCAGCAGTCCGGGTTCCACGACGGGCTGCGAGCAGAATAGCGAC
AAAGTATGGCATGAAAGGCGGTTTTAGTAGTACCGCATGGGCACAGGGCC
AGGCATATCGGCTGAGGTTCATAGCCGGCCCCTGATCTCCTCGTAAACCC
TTGCCGTGTATCATAGTGCTTCTACAAGACAGTGCACACGAATGTTAGAA
TACACATCTGCACGCACGGATGTCATCTATTGCGCAAATTTAGAACAGTA
TGATGCTAAGGGACTTGGCTTCGTCGTACTCAGGAGAATGATGGCTTGGG
TTATGACTTCTTGTTAGATATCCCCGCCGACTCCGTATTGTCAAAGAATT
TTCAACGCTATCAGGCCTTTAATCTCCATTCGTCTTATAGCAATTTATCG
CCACACCGCGTCCCTACATCTTGCATGTATTTAACCACGGAAATCCCACG
TAGATACG back to topprotein sequence of rna5502 >rna5502-protein ID=rna5502-protein|Name=rna5502|organism=Nannochloropsis gaditana|type=polypeptide|length=247bp
MQKDPVEKGRLLRNPTLLVDISLYGFLIGVLSITNFLIVAFVDGDGVQHT
SGCNLTLTPECEHIFRARAACFASTTLLLLLHAYNCKDLARSLRRVKYKN
NKPLALAVGLGVFTLLPTFYIPYVHDKVFYQAPIDWEWGLVLGSVLVFLL
LSEAYKRYLRPLVVQWDQALAHQRKERRMHVIELVDGGERVEKVVPKEGG
KEGGMMQRVFRREGSSFGVRSGWEEDEETEEEMKKEEAAAVIEDHVM back to topmRNA from alignment at CM002466.1:129341..134668- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5502 ID=rna5502|Name=rna5502|organism=Nannochloropsis gaditana|type=mRNA|length=5328bp|location=Sequence derived from alignment at CM002466.1:129341..134668- (Nannochloropsis gaditana)
CCAGGCTCTGGGCCTCGCCTGTGAGCCGCCAGAGGTGGACAGCATGCAGA
AGGATCCGGTCGAGAAAGGCCGACTTCTGCGAAATCCGACGCTCCTGGTC
GACATCTCCTTGTACGGCTTTCTGATCGGGGTCTTATCCATCACGAACTT
CCTCATCGTCGCCTTTGTGGACGGAGACGGGGTTCAGCACACGAGCGGCT
GCAATTTGACGCTGACCCCGGAATGTGAACATATTTTCCGAGCACGGGCC
GCCTGTTTTGCCTCTACCACCTTGCTCCTCCTCCTCCACGCGTACAATTG
CAAGGATCTCGCCCGGTCGCTCCGGAGAGTGAAGTACAAGTACGTGTTTT
TCGGGTTGCAAAGGCCGACAGCGAGGTGCCGAGAGACTATGTGTCGTATG
TCCTACATGTAGTTGGAAGTGGAAGACTTGGTCGATGCAGACTAATGTTC
TAGAAGCCCACTTTCTCTCTCCGCGTTGACCGCCATCATACCTGTCGCCT
GTCTTCCATCTCACCCCCCCCGATCTCCTCTTCTCCTCTCCCCTGCCCCT
TCCCCCGTCCCCCCACCCCGCCAGGAACAACAAGCCTCTCGCCCTGGCCG
TCGGTCTCGGCGTCTTCACCCTCCTCCCGACCTTCTACATCCCCTACGTC
CACGACAAAGTCTTCTACCAGGCGCCCATCGACTGGGAATGGGGCTTGGT
CCTGGGGTCGGTTCTGGTCTTCCTCCTCCTTTCCGAGGCCTACAAGAGGT
ACTTGCGGCCCCTTGTCGTGCAATGGGACCAGGCACTCGCCCACCAAAGG
AAGGAGCGGAGGATGCATGTGATCGAGCTTGTGGACGGCGGGGAGCGGGT
GGAGAAGGTGGTGCCGAAAGAGGGCGGGAAGGAGGGGGGAATGATGCAAC
GGGTGTTTAGGAGGGAGGGGAGCAGTTTTGGTGTTCGAAGTGGGTGGGAG
GAGGATGAGGAAACTGAGGAGGAGATGAAGAAAGAGGAGGCGGCGGCGGT
GATAGAAGATCATGTTATGTAAGGGAAAATTCACCGAAGTGGAGAGAGGG
AGACCTTGATACATTATGATTCAAAATCTAGATAGGATGATAAATGAAAG
AGAAAGGGGGAGAAAATGTGAAGATGGTCGATGTTTTTCCCTTGATGTTT
TTTCCCATGATGAAAGAAATTGTCAGCGGAGAACGAGGGGCCTCACAGCT
TCATATAGGGTTATGGTGTGCTCACTTGTGACGGTACACAGGTCGCTAGG
CGAAAGAGAAAGGTGCATCTCATGATTGACGATATTAATATTATTATCTT
TTTTTGGTAGTACAAAGGGAGGTGTGAAGAATGGACTCAGTGCAACGGCG
AGGAGAGAGGGAAAGGAAAGACAAAGTAAGACTACGAGACCAGCTCGGGG
AGAAATGGAAGAAGCAATGCCATGGAGACCGACAGCAAGTGCATTTAAAT
CGGACTTCCAAGAGGGAGAACAAAGAAAAAGAGAAGAGTGAAGAGATGGA
TGGAAAATGACGAGAGTGGAACACATTTTAGGCATTCATCGATCTGGATG
ATGACTTGAGAGATCGATTTGGGTCGGGCATGAAGAGAGGACAAAGCAAG
CTTGAGAGGCTTTTGAATTCTACCCTATTTTTTGTTTTAGTCAGGTAAAC
TCCTTGGGAAAATTGTTTAAAGTCTTCAACTCCACCTGAGGACCATCATC
GGCCCATGGTACGGAACACGTCTGTGTGCGATACATAATGGCAATGACAA
GAGCAGGTGTCTATCCACCAAGACGTGATTGAGAGTTACGGAGATTATTC
AGACGGCACATGCTATCTGGAGGGACCACTCCTACACCGATCATAAAAGT
CAATTGTAGTAGTCACTTTCTTGAAAACCTCCTCTTAAGATCGTCACACT
TCTCAGATTGAGGATATCGCTTCAATTGTCATATTTATCGTGTCCTTTGA
TTAAAACTTGTCCTGATATTCTCATTATGTCGTCTGTTATATCTTTCGAC
ATTTTTCCTACAACGCTTGCCAAAGGATCCCGACTCTTCTTCTTGCTAGA
ATCCCTACTTGCTCTATGTCAGCAGTATGTCTGGAAGTGTGATCCGTCTA
TCCTTTTTTTGGAAATTATGTTCGTCCTGCATCGGTGTGCATGTGTGTGT
AAGCGTGTGTAGGAGTGTGGTCTTATGTATGTTGTAAGTTATTCACAACT
ACGTAAGTATAAGCTCTTGTCGGAGTTCGCACTAGTGTACTCTGTTTTTG
GGGGCCTTCGTCTGCACCTGTATTTGTATCTGTATCTGTCCCTTTATGCT
TGCTTGTTTCTGTGTTTTGGTTGCTTTTGTGTGCTTATATGACCATCTGC
CTATATTATTTGTGTGTGACTCTGTGTGTAGAAATTTGGGCGGAATAATA
CAGTTTGTGTCTCTCTATGTGGTACACCTCTGTGTTTTAAGTGTGTTACA
TTGTATGTGTCCGAGCTTCGTGTTTCTCAATTTAGCTGTATGCCTGTCTC
TTTATGTTTGTCTCTGTATGTAAAGCCTGAGCGTTTTATTCAGGTTATTC
ATTTCTATGTAGGGACCTGAAAGTGAACGTACACGGGTGTGTATTGTCTG
TTTGCCTCTCTATGGTTCCGTGAATGCTATGTTGTATAAAACGTATGGGA
CTATGCGTACGCCTTGCTGGTTGTAGGTATCTGTCTTGTGGACTCATTGT
CCTTCTGCAAAGAAAGACATTTTGGCGTGTTCTCGTGCGTAGACGTGCGC
TCTCATATGTGTGGTTGCACCTGGGGGTACCTGTCTGTCTGACAGTTCAG
GTGTGTTTACATGAGTAATTTGCCTGCGCCTGAGTATTTCATTCTTTGTG
TGCATGTTTTCAAGTATATGTCTGCGTGCGCTCCTTTTGTGTTGCTGTGT
GCTCGTGTCTATGTTTGGATATATTCTTTGCCAAGTAACGTGATTCCAAG
TATTTTATCCTTCTTTCATCTGTCAGGACAAGGCCAGCTTTTTATGTCAA
CCTCTCTTCTATCCACTTCCTTCCTTTCTACATAAACTTACTTCCGCGGA
ATATACTCTTCTTTTTTCTTTTGTTGCGAAGTATGATGAAAGGAGTTGTG
CTATGAGCTGTGCGTCTTTTTTGAAAGAGACTCACAAAATGAAGTGTTCC
CTGGAGACATTCTTTAGTGAACAATGTTTTGTCACTTTAAGCCTCTTTTT
GTATCATATCCTCGACAAATTCGAAGACTTAATGTCGAGCTTCCTCTTTT
CTTCCACAAGCACATTTTTCCTTCTCCTCTTTCCGTTCCTACCTCGTCTG
ACTCCTTTCCCTTATCCTCTTAATCAAGACACGCCAGAACCGACTCCCCT
ACTTCCTTCCAGGCCTCAAGCGCTACCTGTAACCTCTCGCAAGCGGCGAA
AGCCTCGGTCGCTCGGGCTTTGAGCAGGACAGGCGCTGCTGAATACTCGA
ATTTTTTCATCTTACCTGCCTCTTGGCTATTTACGGGTCCTGGGAGGTTA
TAAGGACCAGCATGTGCTGTCTGTTGAGGAGAAGTCCCATGCTTGCAGAC
CTTGACAGGTCTCGGTGCGAGAGAATTACTGCTTCCTGTACTCACTCGAC
GCCGTGCACGTGCTACACTATCATTCCGTCCGTCTTGTTTCTCAGCAACC
TTCGCCTCGCCCGAGATTCCTTCCTCAAGCTCTGCCTCACCCTTAGTAAT
GGTCTCCAAAGCCTGTTTCACTTTCTTTGGTGAAAATTTTCGGTCTTTCC
CTGATTTTTGGTCTTCACACCTACGTTTCAATTGCGTTTTTTTGTGCTCT
TCTGCTTCGTTTCCTTCGCTCTTTACCCTTTCCACTTGTCTTGTCAACTT
CCCCTCAACTTCGTCTTTCGAAAGCTCTTCTCCTCGTGACGTCACATTTT
CTCCTTTACCGTCAATTTTCTTGTCTATCTTTATCCTTTCCACATGTTTC
CGAATTTTCTCGTTATTCTCGCTTCCCCTTTTGGTCTGCTTTTGTCGCCC
CCTATCTGCGGGGAAATGCTCGAGCTCCACACACTTATTGGAAACTTTTG
CTTTGATGCCACCATTTGTCTTCCGCCCTCCTTCGCTTCCATCTTCCCAT
CCGGAGGGCAGAATGAGCAGATTTCTGGCACCATTCTTTCTGCATCGTCC
CTCCTTTCTACGCAAGACGTTATCGTGCCGCCCTTCGGTCGTCGGTTGCT
TTCTCGCTTCCTCCGTATCATGTTCCTGACTGGTGTCCCTCATTTCTTCT
GCCACATCCTGGCTGTTGTACCTCTTCTTTTTCCTTTCGGCTCCAAGTCC
CGCAAACACATCCAAGGCCTCCGTTGCCAACACACTTGAGGTATCATGGC
CCGCTCTCATCCCGTGCTTCCCCCCCGCTTTCCCTCTTTCCCTCCATTCT
TCACTTGTGTGCGCTACATGATTTTTGAAGAGGGGCTTGAGTGGTCGGGC
GACTTGCTTTCTCTCAGTGCGACATTCTCCACCGTTCCTCCTTTCCTTCT
CAAATTCATCTATTTTCCATTCCTCGTCTTCGGCCTGAGTCGCTTCCTCC
ATCAAATCCCGCACAGAGAGAATGGATTTCTTCCCACTATCTTTCTCACA
CTCCTTCCCTCCTACCCGCCCTTCATTTGCCCCTCCCCGGCCTCCTCGTG
TTAGGTAGAGAAGCATTGCGTGAGTCGAAGCGACGGAGGCTTTCATAAAT
CTCGTGGCTTCGGGCGACCATGCGCCACCGTTTTCTCTCCGAGCAGCGCT
ACCACCCTTTGCTTCGCCCTTACTGCCCTTCTGATCGCTATTATTCTCCT
CAGTATTTTCTTTTTCCTTCTTCTCCTTCTCATCCAGCATTTCCAGTAGC
TCTCCATCTTCAGCCTCAGGGTGGCTCCTCGTTTTTTCGTTTCCTTTTTC
GAAGTCGGCGTCTTCAAGTTGGTGCTTCCGCAGCTTTCCATTCAAAAAGA
CTCTAAGGTCCTCCATTTTCCTTTGACTCCTGAACTCCACAGTGAACGAG
ACCCTTCCTGTATCTCTCTCTCTCTCATTCCCACTTCCCCGCCTCCCGAC
GCGAGAAATGCTTCGATCGGAAGCAAAATAGCCCACAGACGAGGAAGAAC
AAAGATGAGGCGGGAGGGAAGAAAGGCAAGATGGGGGAAACGGGCCAAGC
AGGGCATTCCGGATGGGGACATCGTCGTAGGAGAAGGTCATGGTCGGCCG
GAGGGACGTGGATACGGAGGAAGGAAGAAAATGCACCCTCTTGAGTTTGG
AGTAGGCTAAAAAAATGTCTGTTTCCTCTTTCTCTTCCCCTGCCTCCTCC
TCGTCCTTTCCTTTCCGATCGCGGACCT back to topCoding sequence (CDS) from alignment at CM002466.1:129341..134668- >rna5502 ID=rna5502|Name=rna5502|organism=Nannochloropsis gaditana|type=CDS|length=1488bp|location=Sequence derived from alignment at CM002466.1:129341..134668- (Nannochloropsis gaditana)
GAACAACAAGCCTCTCGCCCTGGCCGTCGGTCTCGGCGTCTTCACCCTCC
TCCCGACCTTCTACATCCCCTACGTCCACGACAAAGTCTTCTACCAGGCG
CCCATCGACTGGGAATGGGGCTTGGTCCTGGGGTCGGTTCTGGTCTTCCT
CCTCCTTTCCGAGGCCTACAAGAGGTACTTGCGGCCCCTTGTCGTGCAAT
GGGACCAGGCACTCGCCCACCAAAGGAAGGAGCGGAGGATGCATGTGATC
GAGCTTGTGGACGGCGGGGAGCGGGTGGAGAAGGTGGTGCCGAAAGAGGG
CGGGAAGGAGGGGGGAATGATGCAACGGGTGTTTAGGAGGGAGGGGAGCA
GTTTTGGTGTTCGAAGTGGGTGGGAGGAGGATGAGGAAACTGAGGAGGAG
ATGAAGAAAGAGGAGGCGGCGGCGGTGATAGAAGATCATGTTATGTAAAT
GCAGAAGGATCCGGTCGAGAAAGGCCGACTTCTGCGAAATCCGACGCTCC
TGGTCGACATCTCCTTGTACGGCTTTCTGATCGGGGTCTTATCCATCACG
AACTTCCTCATCGTCGCCTTTGTGGACGGAGACGGGGTTCAGCACACGAG
CGGCTGCAATTTGACGCTGACCCCGGAATGTGAACATATTTTCCGAGCAC
GGGCCGCCTGTTTTGCCTCTACCACCTTGCTCCTCCTCCTCCACGCGTAC
AATTGCAAGGATCTCGCCCGGTCGCTCCGGAGAGTGAAGTACAAGAACAA
CAAGCCTCTCGCCCTGGCCGTCGGTCTCGGCGTCTTCACCCTCCTCCCGA
CCTTCTACATCCCCTACGTCCACGACAAAGTCTTCTACCAGGCGCCCATC
GACTGGGAATGGGGCTTGGTCCTGGGGTCGGTTCTGGTCTTCCTCCTCCT
TTCCGAGGCCTACAAGAGGTACTTGCGGCCCCTTGTCGTGCAATGGGACC
AGGCACTCGCCCACCAAAGGAAGGAGCGGAGGATGCATGTGATCGAGCTT
GTGGACGGCGGGGAGCGGGTGGAGAAGGTGGTGCCGAAAGAGGGCGGGAA
GGAGGGGGGAATGATGCAACGGGTGTTTAGGAGGGAGGGGAGCAGTTTTG
GTGTTCGAAGTGGGTGGGAGGAGGATGAGGAAACTGAGGAGGAGATGAAG
AAAGAGGAGGCGGCGGCGGTGATAGAAGATCATGTTATGTAAATGCAGAA
GGATCCGGTCGAGAAAGGCCGACTTCTGCGAAATCCGACGCTCCTGGTCG
ACATCTCCTTGTACGGCTTTCTGATCGGGGTCTTATCCATCACGAACTTC
CTCATCGTCGCCTTTGTGGACGGAGACGGGGTTCAGCACACGAGCGGCTG
CAATTTGACGCTGACCCCGGAATGTGAACATATTTTCCGAGCACGGGCCG
CCTGTTTTGCCTCTACCACCTTGCTCCTCCTCCTCCACGCGTACAATTGC
AAGGATCTCGCCCGGTCGCTCCGGAGAGTGAAGTACAA back to top
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