EWM25192.1, cds5488 (CDS) Nannochloropsis gaditana

Overview
NameEWM25192.1
Unique Namecds5488
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:134330..134625 -
Alignment locationCM002466.1:133647..134094 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25192.1
Productpotassium sodium efflux p-type atpase
Orig transcript idgnl|cribi|Naga_100146g11.3720.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:134330..134625 -
CM002466.1supercontigCM002466.1:133647..134094 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR023298ATPase_P-typ_TM_dom
IPR006068ATPase_P-typ_cation-transptr_C
Homology
BLAST of EWM25192.1 vs. NCBI_GenBank
Match: gi|585106854|gb|EWM25192.1| (potassium sodium efflux p-type atpase [Nannochloropsis gaditana])

HSP 1 Score: 509.22 bits (1310), Expect = 0.000e+0
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
Query:    1 MQKDPVEKGRLLRNPTLLVDISLYGFLIGVLSITNFLIVAFVDGDGVQHTSGCNLTLTPECEHIFRARAACFASTTLLLLLHAYNCKDLARSLRRVKYKNNKPLALAVGLGVFTLLPTFYIPYVHDKVFYQAPIDWEWGLVLGSVLVFLLLSEAYKRYLRPLVVQWDQALAHQRKERRMHVIELVDGGERVEKVVPKEGGKEGGMMQRVFRREGSSFGVRSGWEEDEETEEEMKKEEAAAVIEDHVM 247
            MQKDPVEKGRLLRNPTLLVDISLYGFLIGVLSITNFLIVAFVDGDGVQHTSGCNLTLTPECEHIFRARAACFASTTLLLLLHAYNCKDLARSLRRVKYKNNKPLALAVGLGVFTLLPTFYIPYVHDKVFYQAPIDWEWGLVLGSVLVFLLLSEAYKRYLRPLVVQWDQALAHQRKERRMHVIELVDGGERVEKVVPKEGGKEGGMMQRVFRREGSSFGVRSGWEEDEETEEEMKKEEAAAVIEDHVM
Sbjct:    1 MQKDPVEKGRLLRNPTLLVDISLYGFLIGVLSITNFLIVAFVDGDGVQHTSGCNLTLTPECEHIFRARAACFASTTLLLLLHAYNCKDLARSLRRVKYKNNKPLALAVGLGVFTLLPTFYIPYVHDKVFYQAPIDWEWGLVLGSVLVFLLLSEAYKRYLRPLVVQWDQALAHQRKERRMHVIELVDGGERVEKVVPKEGGKEGGMMQRVFRREGSSFGVRSGWEEDEETEEEMKKEEAAAVIEDHVM 247          
BLAST of EWM25192.1 vs. NCBI_GenBank
Match: gi|595441308|gb|EXX53770.1| (putative Na(+)-exporting P-type ATPase ENA5 [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 125.946 bits (315), Expect = 2.648e-29
Identity = 71/183 (38.80%), Postives = 106/183 (57.92%), Query Frame = 0
Query:    1 MQKDPVEKGRLLRNPTLLVDISLYGFLIGVLSITNFLIVAFVDGDGVQHTSGCNLT------LTPECEHIFRARAACFASTTLLLLLHAYNCKDLARSLRRVKYKNNKPLALAVGLGVFTLLPTFYIPYVHDKVFYQAPIDWEWGLVLGSVLVFLLLSEAYK----RYLRPLVVQWDQALAHQ 173
            M+  P  KG L     +++D+  YG ++G LS+ NF+IV +  G+G      CN +      L   C  I+RAR   FA+ T +LL+HAYNC+ L   +  +K  +NK L  +V  G+ T +PTFYIP ++ KVF Q  I +EWGL++G+V++F +  E YK    RYL+PL +   + L  Q
Sbjct:  809 MRYPPRSKGGLF-TWEVIIDMIYYGIVLGGLSLANFVIVIYAIGNG-NLGQNCNSSPYGQESLEIACHQIYRARGTTFATFTYILLIHAYNCRSLRDPIWTMKLYDNKILFWSVFGGLLTAIPTFYIPELNSKVFKQLGIGYEWGLIVGAVIIFEIFVEVYKFMKRRYLKPLEIVEGEGLKRQ 989          
BLAST of EWM25192.1 vs. NCBI_GenBank
Match: gi|89885325|emb|CAJ42021.1| (P-Type II D ATPase [Rhizophagus intraradices])

HSP 1 Score: 123.25 bits (308), Expect = 2.069e-28
Identity = 71/194 (36.60%), Postives = 106/194 (54.64%), Query Frame = 0
Query:    1 MQKDPVEKGRLLRNPTLLVDISLYGFLIGVLSITNFLIVAFVDGDGVQHTSGCN-----------------LTLTPECEHIFRARAACFASTTLLLLLHAYNCKDLARSLRRVKYKNNKPLALAVGLGVFTLLPTFYIPYVHDKVFYQAPIDWEWGLVLGSVLVFLLLSEAYK----RYLRPLVVQWDQALAHQ 173
            M+  P  KG L     +++D+  YG ++G LS+ NF+IV +  G+G      CN                 + L   C  I+RAR   FA+ T +LL+HAYNC+ L   +  +K  +NK L  +V  G+ T +PTFYIP ++ KVF Q  I +EWGL++G+V++F +  E YK    RYL+PL +   + L  Q
Sbjct:  601 MRYPPRSKGGLF-TWEVIIDMIYYGIVLGGLSLANFVIVVYAIGNG-NLGQNCNSSPFGQECAPNDPTCDPIALEIACHQIYRARGTTFATITYILLIHAYNCRSLRDPIWTMKLYDNKILFWSVFGGLLTAIPTFYIPELNSKVFKQLGIGYEWGLIVGAVIIFEIFVEIYKFMKRRYLKPLEIVEGEGLKQQ 792          
BLAST of EWM25192.1 vs. NCBI_GenBank
Match: gi|595458167|gb|EXX62354.1| (Na(+)-exporting P-type ATPase ENA2 [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 123.25 bits (308), Expect = 2.237e-28
Identity = 71/194 (36.60%), Postives = 106/194 (54.64%), Query Frame = 0
Query:    1 MQKDPVEKGRLLRNPTLLVDISLYGFLIGVLSITNFLIVAFVDGDGVQHTSGCN-----------------LTLTPECEHIFRARAACFASTTLLLLLHAYNCKDLARSLRRVKYKNNKPLALAVGLGVFTLLPTFYIPYVHDKVFYQAPIDWEWGLVLGSVLVFLLLSEAYK----RYLRPLVVQWDQALAHQ 173
            M+  P  KG L     +++D+  YG ++G LS+ NF+IV +  G+G      CN                 + L   C  I+RAR   FA+ T +LL+HAYNC+ L   +  +K  +NK L  +V  G+ T +PTFYIP ++ KVF Q  I +EWGL++G+V++F +  E YK    RYL+PL +   + L  Q
Sbjct:  825 MRYPPRSKGGLF-TWEVIIDMIYYGIVLGGLSLANFVIVVYAIGNG-NLGQNCNSSPFGQECAPNDPTCDPIALEIACHQIYRARGTTFATITYILLIHAYNCRSLRDPIWTMKLYDNKILFWSVFGGLLTAIPTFYIPELNSKVFKQLGIGYEWGLIVGAVIIFEIFVEIYKFMKRRYLKPLEIVEGEGLKQQ 1016          
BLAST of EWM25192.1 vs. NCBI_GenBank
Match: gi|1183489105|gb|ORZ12807.1| (potassium/sodium efflux P-type ATPase [Absidia repens])

HSP 1 Score: 123.25 bits (308), Expect = 2.435e-28
Identity = 64/146 (43.84%), Postives = 89/146 (60.96%), Query Frame = 0
Query:   18 LVDISLYGFLIGVLSITNFLIVAFVDGDGVQHTSGCNLTLTPECEHIFRARAACFASTTLLLLLHAYNCKDL---ARSLRRVKYKNNKPLALAVGLGVFTLLPTFYIPYVHDKVFYQAPIDWEWGLVLGSVLVFLLLSEAYKRYLR 160
            +VDI  YG ++G++ + NF IV F  GDG    S CNL    EC  ++RAR A FA+ T+LLLLH Y C+DL   A S + +  K N  L  +   G   +  T Y+P ++ +VF  APIDWEWG+V  S +V++ L+E +K YLR
Sbjct:  914 VVDILYYGVMMGLICLANFAIVVFGWGDG-NLGSNCNLNYDEECFLVYRARGALFATMTVLLLLHGYTCRDLKHPAWSWKALTTKQNYYLHASTAFGFAIMFVTLYVPVLNTQVFRHAPIDWEWGMVAASTIVYVALAEGWK-YLR 1057          
BLAST of EWM25192.1 vs. NCBI_GenBank
Match: gi|89885327|emb|CAJ42022.1| (P-type II D ATPase [Rhizophagus intraradices])

HSP 1 Score: 122.479 bits (306), Expect = 3.789e-28
Identity = 71/194 (36.60%), Postives = 106/194 (54.64%), Query Frame = 0
Query:    1 MQKDPVEKGRLLRNPTLLVDISLYGFLIGVLSITNFLIVAFVDGDGVQHTSGCN-----------------LTLTPECEHIFRARAACFASTTLLLLLHAYNCKDLARSLRRVKYKNNKPLALAVGLGVFTLLPTFYIPYVHDKVFYQAPIDWEWGLVLGSVLVFLLLSEAYK----RYLRPLVVQWDQALAHQ 173
            M+  P  KG L     +++D+  YG ++G LS+ NF+IV +  G+G      CN                 + L   C  I+RAR   FA+ T +LL+HAYNC+ L   +  +K  +NK L  +V  G+ T +PTFYIP ++ KVF Q  I +EWGL++G+V++F +  E YK    RYL+PL +   + L  Q
Sbjct:  602 MRYPPRSKGGLF-TWEVIIDMIYYGIVLGGLSLANFVIVIYAIGNG-NLGQNCNSSPYGQECAPNDPTCDPIALEIACHQIYRARGTTFATFTYILLIHAYNCRSLRDPIWTMKLYDNKILFWSVFGGLLTAIPTFYIPELNSKVFKQLGIGYEWGLIVGAVIIFEIFVEVYKFMKRRYLKPLEIVEGEGLKRQ 793          
BLAST of EWM25192.1 vs. NCBI_GenBank
Match: gi|1183372145|gb|ORX97929.1| (potassium/sodium efflux P-type ATPase [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 122.094 bits (305), Expect = 6.368e-28
Identity = 72/174 (41.38%), Postives = 99/174 (56.90%), Query Frame = 0
Query:   13 RNPT-------LLVDISLYGFLIGVLSITNFLIVAFVDGDGVQHTSGCNLTLTPECEHIFRARAACFASTTLLLLLHAYNCKDLARSLRRVK--------YKNNKPLALAVGLGVFTLLPTFYIPYVHDKVFYQAPIDWEWGLVLGSVLVFLLLSEAYK----RYLRPLVVQWD 167
            R+PT       ++ DI +YG L+G LS+ NF++V F  GDG      CN   +  C+ +FRAR A F+  TLL+LLHAYNC    RSLR  +        Y +N+PL  ++ LG   L+P  YIPYV+  +F    + WEW +V  SVL+FL  SE YK    R ++P +V  D
Sbjct:  811 RSPTSGIFTLEIISDILVYGTLMGGLSLLNFVLVVFGFGDG-NLGHDCNSAYSDACDLVFRARGAAFSCLTLLILLHAYNC----RSLREPQWLPPGIRNYYSNRPLFWSIFLGCGLLIPVLYIPYVNTSIFKHQYLTWEWAVVGVSVLIFLAASELYKLIKRRTMKPNIVLVD 979          
BLAST of EWM25192.1 vs. NCBI_GenBank
Match: gi|1183367641|gb|ORX93774.1| (potassium/sodium efflux P-type ATPase [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 120.939 bits (302), Expect = 1.598e-27
Identity = 67/180 (37.22%), Postives = 101/180 (56.11%), Query Frame = 0
Query:    1 MQKDPVEKGRLLRNPTLLVDISLYGFLIGVLSITNFLIVAFVDGDGVQHTSGCNLTLTPECEHIFRARAACFASTTLLLLLHAYNCKDLARSLRRVKYK--------NNKPLALAVGLGVFTLLPTFYIPYVHDKVFYQAPIDWEWGLVLGSVLVFLLLSEAYK----RYLRPLVVQWDQ 168
            M+  P    R L N   + DI LYG ++G++++ +F+IV +  G+G   T  CN + +  C+ +FRAR   F + TLL L+HAYNC    RSLR+ ++          NK L  +  LGV  + P  YIPY++  VF    + WEWG+V  SV++F++ SE YK    R+L   V+  D+
Sbjct:  806 MRVPPRPTRRGLFNYEAIADIVLYGAMMGLIALADFIIVVYGFGNGSLGTE-CNRSYSDSCDEVFRARGTVFTTLTLLFLIHAYNC----RSLRQPQWLPKSWKGLFENKALVGSFTLGVILIFPILYIPYLNTDVFKHKALTWEWGVVAVSVVIFIVFSELYKFVKRRFLENKVIVMDE 980          
BLAST of EWM25192.1 vs. NCBI_GenBank
Match: gi|406700059|gb|EKD03245.1| (hypothetical protein A1Q2_02466 [Trichosporon asahii var. asahii CBS 8904])

HSP 1 Score: 119.398 bits (298), Expect = 4.770e-27
Identity = 64/180 (35.56%), Postives = 103/180 (57.22%), Query Frame = 0
Query:   19 VDISLYGFLIGVLSITNFLIV--AFVDGDGVQHTSGCNLTLTPECEHIFRARAACFASTTLLLLLHAYNCKDLARSLRRVKYKNNKPLALAVGLGVFTLLPTFYIPYVHDKVFYQAPIDWEWGLVLGSVLVFLLLSEAYKRYLRPLVVQWDQALAHQRKERRMHVIELVDGGERVEKVVP 196
            +D+ +YGF++G L++ NF+IV   +  GD + H   CN   +  C+ +F+AR  CFA+  ++L++HA  CK + +S+ R+   +NK L   V +   T  P  YIP +++KVF   P+ WEWG+V G +LV+L   E YK + R  ++ W++  A          IE  D   R+EK +P
Sbjct:  923 IDLFVYGFVMGALALVNFVIVMWGYFPGD-LGHD--CNEGDSAICDPVFQARGTCFATLVIILMIHALECKHVMQSVFRMNLLDNKVLLWCVVVLSLTTFPVIYIPVINNKVFLVGPLKWEWGIVFGMILVYLFFVETYKFFKR-RIMGWNKKQAQ---------IESGDKTLRMEKTIP 1089          
BLAST of EWM25192.1 vs. NCBI_GenBank
Match: gi|930409651|ref|XP_014179098.1| (calcium-transporting ATPase 3 [Trichosporon asahii var. asahii CBS 2479] >gi|401883742|gb|EJT47935.1| calcium-transporting ATPase 3 [Trichosporon asahii var. asahii CBS 2479])

HSP 1 Score: 119.398 bits (298), Expect = 4.891e-27
Identity = 64/180 (35.56%), Postives = 103/180 (57.22%), Query Frame = 0
Query:   19 VDISLYGFLIGVLSITNFLIV--AFVDGDGVQHTSGCNLTLTPECEHIFRARAACFASTTLLLLLHAYNCKDLARSLRRVKYKNNKPLALAVGLGVFTLLPTFYIPYVHDKVFYQAPIDWEWGLVLGSVLVFLLLSEAYKRYLRPLVVQWDQALAHQRKERRMHVIELVDGGERVEKVVP 196
            +D+ +YGF++G L++ NF+IV   +  GD + H   CN   +  C+ +F+AR  CFA+  ++L++HA  CK + +S+ R+   +NK L   V +   T  P  YIP +++KVF   P+ WEWG+V G +LV+L   E YK + R  ++ W++  A          IE  D   R+EK +P
Sbjct:  808 IDLFVYGFVMGALALVNFVIVMWGYFPGD-LGHD--CNEGDSAICDPVFQARGTCFATLVIILMIHALECKHVMQSVFRMNLLDNKVLLWCVVVLSLTTFPVIYIPVINNKVFLVGPLKWEWGIVFGMILVYLFFVETYKFFKR-RIMGWNKKQAQ---------IESGDKTLRMEKTIP 974          
The following BLAST results are available for this feature:
BLAST of EWM25192.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106854|gb|EWM25192.1|0.000e+0100.00potassium sodium efflux p-type atpase [Nannochloro... [more]
gi|595441308|gb|EXX53770.1|2.648e-2938.80putative Na(+)-exporting P-type ATPase ENA5 [Rhizo... [more]
gi|89885325|emb|CAJ42021.1|2.069e-2836.60P-Type II D ATPase [Rhizophagus intraradices][more]
gi|595458167|gb|EXX62354.1|2.237e-2836.60Na(+)-exporting P-type ATPase ENA2 [Rhizophagus ir... [more]
gi|1183489105|gb|ORZ12807.1|2.435e-2843.84potassium/sodium efflux P-type ATPase [Absidia rep... [more]
gi|89885327|emb|CAJ42022.1|3.789e-2836.60P-type II D ATPase [Rhizophagus intraradices][more]
gi|1183372145|gb|ORX97929.1|6.368e-2841.38potassium/sodium efflux P-type ATPase [Basidiobolu... [more]
gi|1183367641|gb|ORX93774.1|1.598e-2737.22potassium/sodium efflux P-type ATPase [Basidiobolu... [more]
gi|406700059|gb|EKD03245.1|4.770e-2735.56hypothetical protein A1Q2_02466 [Trichosporon asah... [more]
gi|930409651|ref|XP_014179098.1|4.891e-2735.56calcium-transporting ATPase 3 [Trichosporon asahii... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5502rna5502Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications