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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101120g1.4951.mrna |
| Orig protein id | gnl|cribi|Naga_101120g1.4951 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:83798..84358 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5491 ID=rna5491|Name=rna5491|organism=Nannochloropsis gaditana|type=mRNA|length=918bp
CGACCTCCCCCCTACGTCAACTATTTGATAATTCCCGCATTTCCTTTTTG
GCAGGCTCTTCGGTAAACGGCGCGCCTTCCTCCTGAGAACTATGATCTTC
TAAATCCGAGCTTGGCATGAACACTTTTCATACCAAACGAGGAAGGGTGA
GGCAACCGAGGAAGGAAGAGACAGCAGGTTTTCTTCCCTCCCCTGCCCGA
CAACAATGGTCCTTGGAAAAAGAACGCGCGCAGCTGCAATTGCGGCAGCA
AAAAATGCTGTTGACATCTTGTGTGTCGGTAGATAGCCATCAAAAAGGCA
CGGGATCCTTTAATTCACCTTCAAGCAGGCGGTCGCAGCGCCCGTCCTCC
CCCCCTCCCTCCCTCCCTTCCTCCCCCCCTCCTTCCCTCCCGTCCCCGCC
TTCCACCGCCGCGGAGCGCCGGGCAGAACGAAGACGTGCCTTTTTGCAAT
CGTCTCGCGAAAGTGACGAAGCGATAGGGCGGGCGAGATCCAAGAGTAAT
TCACCCAGAGTCGAGCGGGCACTGCAGCAACAGCCCTCCCCTGACCTTTT
ATTGAATCCATTGCATCGACTGTCGCACGCATTCGAAAGCCACGCAGAAG
CAGCCCAGCGCTGGCAAGGGAAGGAAAGGCGTCGGACTATGGAAACGGAG
GGCAAGGAAGAGGAAACTTGCCACACTTCAAGTCGAGGCATTCGACTACC
TTCCCCTTCCCTTCTATCCCCCCCTCGCTCCCTCCCTCAGACCCCTCCTC
CTCCCTCTTCCCGCCGCATCACCCCTCCTTCCTCGACAGGCGTGCGGACA
GGCCAGGAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGTG
GAGGGGTGGCCTGAGGCAGGATGTCGAGAAGCGGGAGCAGGAATCCGCAA
GGTTGAGAGCATTGATGG back to topprotein sequence of rna5491 >rna5491-protein ID=rna5491-protein|Name=rna5491|organism=Nannochloropsis gaditana|type=polypeptide|length=116bp
MREAPYDEASHQPCQYGVLLHDGFRRGQEERGDHLPRLVGRSPLPESARA
GGGSLEREEGGDKGLTLRERSRTTRGSSSVRRCVYALCQSFYGRVNSKQN
QAVKIKKKLRRHFSHA back to topmRNA from alignment at CM002466.1:83798..84358- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5491 ID=rna5491|Name=rna5491|organism=Nannochloropsis gaditana|type=mRNA|length=561bp|location=Sequence derived from alignment at CM002466.1:83798..84358- (Nannochloropsis gaditana)
ATGAGGGAGGGTGGGTGGGGGGGGGAAGAAAAGCGAGGGGGTCTCGTGAT
AGGACGGGGAGGGAGGGGCAGAGGGAGGGATAGAGGGAAGGTTGTTGCGT
GAAGAGGGAAAGAGGGGAAAATGAAGGGGGCGACAGGGAGTCGATGTAGG
AAGAGGGAGGGGTAAGGGGGTGTATGAATATGAATGCGCTTGGGAGTGCT
GAGGTTGCATGTATAGGCAGCTCCATACGATGAGGCGTCCCACCAGCCGT
GCCAATACGGAGTGCTTTTGCACGATGGATTTCGACGGGGGCAAGAGGAG
CGAGGGGATCATCTGCCTCGTCTGGTAGGAAGATCTCCGTTGCCTGAATC
TGCTCGGGCGGGAGGAGGGAGCTTGGAGAGGGAAGAAGGAGGAGACAAGG
GCTTGACGCTGCGAGAACGGTCGCGAACGACAAGGGGAAGCTCAAGCGTT
CGACGATGTGTGTATGCTCTCTGCCAGAGCTTTTATGGCAGGGTAAATTC
GAAGCAAAATCAGGCAGTAAAAATTAAAAAAAAATTGCGTCGTCACTTCT
CTCATGCGTAA back to topCoding sequence (CDS) from alignment at CM002466.1:83798..84358- >rna5491 ID=rna5491|Name=rna5491|organism=Nannochloropsis gaditana|type=CDS|length=702bp|location=Sequence derived from alignment at CM002466.1:83798..84358- (Nannochloropsis gaditana)
CTCCATACGATGAGGCGTCCCACCAGCCGTGCCAATACGGAGTGCTTTTG
CACGATGGATTTCGACGGGGGCAAGAGGAGCGAGGGGATCATCTGCCTCG
TCTGGTAGGAAGATCTCCGTTGCCTGAATCTGCTCGGGCGGGAGGAGGGA
GCTTGGAGAGGGAAGAAGGAGGAGACAAGGGCTTGACGCTGCGAGAACGG
TCGCGAACGACAAGGGGAAGCTCAAGCGTTCGACGATGTGTGTATGCTCT
CTGCCAGAGCTTTTATGGCAGGGTAAATTCGAAGCAAAATCAGGCAGTAA
AAATTAAAAAAAAATTGCGTCGTCACTTCTCTCATGCGTAAATGAGGGAG
GCTCCATACGATGAGGCGTCCCACCAGCCGTGCCAATACGGAGTGCTTTT
GCACGATGGATTTCGACGGGGGCAAGAGGAGCGAGGGGATCATCTGCCTC
GTCTGGTAGGAAGATCTCCGTTGCCTGAATCTGCTCGGGCGGGAGGAGGG
AGCTTGGAGAGGGAAGAAGGAGGAGACAAGGGCTTGACGCTGCGAGAACG
GTCGCGAACGACAAGGGGAAGCTCAAGCGTTCGACGATGTGTGTATGCTC
TCTGCCAGAGCTTTTATGGCAGGGTAAATTCGAAGCAAAATCAGGCAGTA
AAAATTAAAAAAAAATTGCGTCGTCACTTCTCTCATGCGTAAATGAGGGA
GG back to top
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