Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100693g1.3146.mrna |
Orig protein id | gnl|cribi|Naga_100693g1.3146 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002466.1 | supercontig | CM002466.1:73017..73560 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5484 ID=rna5484|Name=rna5484|organism=Nannochloropsis gaditana|type=mRNA|length=1455bp ATGATGAATTTGGTGAGGTCGATAGGTGCAAACTGTTGCAAACTTGATCT ACATGACCTAAGGTATGTGATACGCCTCCGATTTATAATAAGCAATAGCA TTTTATCATACGCCACGAAAGGGTTAAATGACGTATCTGGCTGCGAAAGA GGATTCGCTTCGACCTACTACCCTTCCTTCGCCCAACACCGTCGTCTGTG CCTCTCTCGCCATCAACCTGCCCCCAACACACCGTTGCGATATAAAAATA AAATTCAGGTCGTAACACCAACAGGTGGCATCATCGCTGCGCCCTTTCGA TCGATCTCTGCTGTGCACTTTTCCCCCTCGTCTTGTCCTATCCCCGCCGC GTCCCTCGGCGCCGTGTCCATGGCACCCAAACGCAAATTGGCCTCAACAC GATTGAACTTGGAAGAAAGAGAATACAGCGCAAAGGGATGGATGGACCTG GACGTCCCTCCGCACGAGCTGCGCCCAGAATTCTCCCTGACGATGGGTCA GTGTTTCAATTGGCGCCGTCAAGACCCGGTCGAATGCCTTTTCTCCTTCA TCTGCTCCTCCAACAACAACATACCTCGCATCGCCCTGATGCTGGATCGG CTCAGGAAAACATACGGAGAACCTCTGGGGAAAGGATATCATGCCTTCCC TCCCCTCTCCTCCCTCGCCTCCGCCTCTGAGGAGGAGCTTCGTGGCCTCG GTCTTGGCTACCGGGCTCGCTTTATCAAGTTAACGGCATCTCAACTTTTG GACCTTGGTGGAAGGGAGTGGCTGATGTCCCTCCGGGAGAAATCTCGCGA GGAAGCACAGCAAGCACTCTGCGCCTTCCCAGGCGTAGGGAGGAAAGTTG CCGACTGTGTGGCTCTTTTTTCCTTGGACCAACACGGTGCCATACCGGTG GATGTGCACGTGTGGCGTATCGCCTGTCGAGACTACTCTCCCGTCCTCAA AGAACACAAAAGCTTGACGCCCGCTGTCTACGAAGCCGTCGGGGACATTT TTCGGAACAAATTCGGGTCGCATGCGGGCTGGGCACATTCCCTTCTATTT GCAGCCGAATTGCCCGATTACAGAGCACGTCTTCCCCTCTTTCTTCAAAA CGAAATGCTTGCATTTAAAAAAGAAGAAGGGATTGAGAAAGCCTTGAAAA GGGAAGCGCAAAAGGCGAAGAGGAAAGAAAAAGCGGAAAAAGGAGAGGAA GAACGGGCCACAGTAATTATTGAGAAGACGACGGAGGAAACCATCAAGGA TGAAATCTTGCGAACAGAGGAAAGAATAGTTGAATTGGAAGAAGAAGAAG GCAAAGTATTACGGGACGTAAAAACAAAGGCTATGAGCAAGCGTACGAAA AGACAGAAAGTAAGTATTAGCGAGGAGAAGAACAGCTGTGCTAGAACAAG TATGGAAGCACAAGGAGGTGGTAAGCATGTCAAAAAAGAGGAAAAGGATT CATGA back to topprotein sequence of rna5484 >rna5484-protein ID=rna5484-protein|Name=rna5484|organism=Nannochloropsis gaditana|type=polypeptide|length=168bp SLPPSLHVLQDVLPKLNRLMQSESLPGEGELQAPPPPPPLPPSAELYKFP ALPPPPPPSLPPSLPSMTSLSHALTPRPRKKGRGGAGREGGREGGRGGGE KVNRAISEEGQGKEEVGGLKEEKKGGKKGRKEGGREGGREGGGEVALRPL LPIGVQEEEADDRKGGGD back to topmRNA from alignment at CM002466.1:73017..73560- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5484 ID=rna5484|Name=rna5484|organism=Nannochloropsis gaditana|type=mRNA|length=544bp|location=Sequence derived from alignment at CM002466.1:73017..73560- (Nannochloropsis gaditana) TCCCTCCCTCCCTCCCTCCACGTCCTTCAGGATGTGCTGCCCAAGCTGAA
TAGACTTATGCAGTCCGAGTCCCTGCCTGGGGAGGGTGAGCTTCAAGCCC
CCCCGCCTCCTCCCCCCCTTCCTCCGTCCGCGGAGCTGTACAAATTCCCC
GCCCTCCCTCCTCCTCCACCTCCCTCGCTCCCGCCCTCCCTCCCTTCCAT
GACCTCCCTCTCCCATGCCCTGACCCCGAGGCCCCGGAAGAAAGGAAGGG
GAGGGGCAGGGCGGGAGGGAGGGCGAGAGGGAGGACGCGGTGGTGGGGAG
AAGGTCAATCGGGCAATCTCAGAGGAGGGACAGGGTAAAGAGGAGGTTGG
AGGCCTAAAGGAGGAGAAGAAAGGCGGGAAGAAGGGGCGGAAGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGCGGTGGCGAGGTGGCCCTGCGTCCTTTG
CTTCCAATAGGAGTACAGGAAGAAGAAGCCGATGACAGAAAGGGAGGAGG
GGATTGAAAGTGAAGAAAATAAAAATAAGAAAAGACTTGTGTTT back to topCoding sequence (CDS) from alignment at CM002466.1:73017..73560- >rna5484 ID=rna5484|Name=rna5484|organism=Nannochloropsis gaditana|type=CDS|length=507bp|location=Sequence derived from alignment at CM002466.1:73017..73560- (Nannochloropsis gaditana) TCCCTCCCTCCCTCCCTCCACGTCCTTCAGGATGTGCTGCCCAAGCTGAA TAGACTTATGCAGTCCGAGTCCCTGCCTGGGGAGGGTGAGCTTCAAGCCC CCCCGCCTCCTCCCCCCCTTCCTCCGTCCGCGGAGCTGTACAAATTCCCC GCCCTCCCTCCTCCTCCACCTCCCTCGCTCCCGCCCTCCCTCCCTTCCAT GACCTCCCTCTCCCATGCCCTGACCCCGAGGCCCCGGAAGAAAGGAAGGG GAGGGGCAGGGCGGGAGGGAGGGCGAGAGGGAGGACGCGGTGGTGGGGAG AAGGTCAATCGGGCAATCTCAGAGGAGGGACAGGGTAAAGAGGAGGTTGG AGGCCTAAAGGAGGAGAAGAAAGGCGGGAAGAAGGGGCGGAAGGAGGGAG GGAGGGAGGGAGGGAGGGAGGGCGGTGGCGAGGTGGCCCTGCGTCCTTTG CTTCCAATAGGAGTACAGGAAGAAGAAGCCGATGACAGAAAGGGAGGAGG GGATTGA back to top
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