EWM25203.1, cds5470 (CDS) Nannochloropsis gaditana

Overview
NameEWM25203.1
Unique Namecds5470
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:73054..73560 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25203.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100693g1.3146.mrna
GbkeyCDS
End range.
End range73560
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:73054..73560 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25203.1 vs. NCBI_GenBank
Match: gi|585106879|gb|EWM25203.1| (hypothetical protein Naga_100693g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 308.145 bits (788), Expect = 1.588e-105
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0 
Query:    1 SLPPSLHVLQDVLPKLNRLMQSESLPGEGELQAPPPPPPLPPSAELYKFPALPPPPPPSLPPSLPSMTSLSHALTPRPRKKGRGGAGREGGREGGRGGGEKVNRAISEEGQGKEEVGGLKEEKKGGKKGRKEGGREGGREGGGEVALRPLLPIGVQEEEADDRKGGGD 168
            SLPPSLHVLQDVLPKLNRLMQSESLPGEGELQAPPPPPPLPPSAELYKFPALPPPPPPSLPPSLPSMTSLSHALTPRPRKKGRGGAGREGGREGGRGGGEKVNRAISEEGQGKEEVGGLKEEKKGGKKGRKEGGREGGREGGGEVALRPLLPIGVQEEEADDRKGGGD
Sbjct:    1 SLPPSLHVLQDVLPKLNRLMQSESLPGEGELQAPPPPPPLPPSAELYKFPALPPPPPPSLPPSLPSMTSLSHALTPRPRKKGRGGAGREGGREGGRGGGEKVNRAISEEGQGKEEVGGLKEEKKGGKKGRKEGGREGGREGGGEVALRPLLPIGVQEEEADDRKGGGD 168
The following BLAST results are available for this feature:
BLAST of EWM25203.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106879|gb|EWM25203.1|1.588e-105100.00hypothetical protein Naga_100693g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5484rna5484Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications