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Properties
| Property Name | Value |
|---|
| Product | transcriptional coactivator pterin dehydratase |
| Orig transcript id | gnl|cribi|Naga_100089g9.9643.mrna |
| Orig protein id | gnl|cribi|Naga_100089g9.9643 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:1043304..1044384 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5456 ID=rna5456|Name=rna5456|organism=Nannochloropsis gaditana|type=mRNA|length=339bp
ATGCCAAATGCAGAAAGAAGTTGTTTGGGTTGTTTTGTGCATGACAGTCG
CGTCTTCAACGCGAAGTGGGCTGCAGCTGCCTCCCTGCTTTTCTCAAGCA
TAAGTCAATTTATAGAGACTAAGCTCCGTCTCCATCAACGCTCAGTGTGT
AGCATTTGCATCTACAGATTCAAGATGATTGCACGGGTGGACCATTTTAC
CAAGTCATTAACAAGGAATAAACCTCATCAAGAATTTTGGAAACCGATGC
ATCACATGGGGAACAAGAGGTGTTATCTTCGGTTTCTTCACAGCGCCGAC
ACCTTCTCTCGACTCGGAGAGATCAAGTTGATGGCTTGA back to topprotein sequence of rna5456 >rna5456-protein ID=rna5456-protein|Name=rna5456|organism=Nannochloropsis gaditana|type=polypeptide|length=198bp
MLGGPFSRLTHISFIVHWRCMRQLFLSTPCVVLVAVSAAFQVSFSPAALS
TSYCQSMSESAPEVSPPSCTRDAKKHCVPCEGGLPALSIERVQAVLPSLP
LWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYRE
VEVVLYTHAVGGLTENDLIMAALIDTVPASYSPKWLKEHPEAGKSAAR back to topmRNA from alignment at CM002465.1:1043304..1044384+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5456 ID=rna5456|Name=rna5456|organism=Nannochloropsis gaditana|type=mRNA|length=1081bp|location=Sequence derived from alignment at CM002465.1:1043304..1044384+ (Nannochloropsis gaditana)
AGACGGAGCTTAGTCTCTATAAATTGACTTATGCTTgagaaaagcaggga
ggcagcTGCAGCCCACTTCGCGTTGAAGACGCGACTGTCATGCACAAAAC
AACCCAAACAACTTCTTTCTGCATTTGCTAGTAGAATTGATCATAGTTGT
GATGAGTTTTAACTTATGTACTCGAAAGGCGCGTGCGAAGAGCGTGGAAG
GCAATGTTTCCTTTGACGCATACGTGGGGGCGTACAGCTTTTTTTAATGT
TCCTGCAGTAGCCCTGTTATCGTCTCGCTAGCATCATGCCGGTGCCTCCG
TGCGGCACGCCTGGTTATCTTTCTCTTTGACAAATGCTTGGCGGCCCTTT
CTCCCGACTAACACACATTTCATTCATAGTGCATTGGCGGTGCATGCGTC
AGCTTTTTCTGTCAACACCTTGCGTGGTCCTTGTTGCCGTAAGCGCAGCT
TTCCAagtgtccttctcccctgctGCACTATCTACCTCTTATTGCCAGAG
CATGAGCGAATCTGCTCCTGAAGTCAGCCCGCCCTCGTGCACTCGTGACG
CAAAAAAGCATTGCGTTCCGTGCGAAGGAGGACTTCCAGCGTTGTCGATC
GAGCGCGTgcaagccgtcctcccctcactccctttgTGGCGTCTAAGTAA
AGATCATAAGCGACTCTCTCGTTCTTTCACGGCCAAAAATTTCGCCGCTG
CCCTTGCTTTTATAGATGCAGTAGGAGCTGTCGCTGAGTGCGAAGGCCAC
CACCCAGACTTACACCTGACGAGCTACAGGGAAGTAGAAGTGGTCTTGTA
CACACACGCGGTAGGAGGTTTGACCGAGAACGATCTGATTATGGCTGCAT
TGATCGATACAGTACCTGCCTCATACAGCCCCAAATGGCTGAAAGAACAT
CCGGAGGCTGGAAAAAGTGCAGCACGATAGAGCAtgtgaagaaaaaatga
aaggatTTTGGATGAGATATGTatggatggaaaaggtaGACTTAAAAAGG
ACAATGAGCAAAAGAAATGGGTATAAGAGAACTCCGATCCCGCAGACGAA
TTACAAAATGAGATGTCGTATAAGATTCGTC back to topCoding sequence (CDS) from alignment at CM002465.1:1043304..1044384+ >rna5456 ID=rna5456|Name=rna5456|organism=Nannochloropsis gaditana|type=CDS|length=597bp|location=Sequence derived from alignment at CM002465.1:1043304..1044384+ (Nannochloropsis gaditana)
ATGCTTGGCGGCCCTTTCTCCCGACTAACACACATTTCATTCATAGTGCA
TTGGCGGTGCATGCGTCAGCTTTTTCTGTCAACACCTTGCGTGGTCCTTG
TTGCCGTAAGCGCAGCTTTCCAagtgtccttctcccctgctGCACTATCT
ACCTCTTATTGCCAGAGCATGAGCGAATCTGCTCCTGAAGTCAGCCCGCC
CTCGTGCACTCGTGACGCAAAAAAGCATTGCGTTCCGTGCGAAGGAGGAC
TTCCAGCGTTGTCGATCGAGCGCGTgcaagccgtcctcccctcactccct
ttgTGGCGTCTAAGTAAAGATCATAAGCGACTCTCTCGTTCTTTCACGGC
CAAAAATTTCGCCGCTGCCCTTGCTTTTATAGATGCAGTAGGAGCTGTCG
CTGAGTGCGAAGGCCACCACCCAGACTTACACCTGACGAGCTACAGGGAA
GTAGAAGTGGTCTTGTACACACACGCGGTAGGAGGTTTGACCGAGAACGA
TCTGATTATGGCTGCATTGATCGATACAGTACCTGCCTCATACAGCCCCA
AATGGCTGAAAGAACATCCGGAGGCTGGAAAAAGTGCAGCACGATAG back to top
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