EWM25234.1, cds5443 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25234.1 vs. NCBI_GenBank
Match: gi|585106926|gb|EWM25234.1| (transcriptional coactivator pterin dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 405.601 bits (1041), Expect = 3.674e-143 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0 Query: 1 MLGGPFSRLTHISFIVHWRCMRQLFLSTPCVVLVAVSAAFQVSFSPAALSTSYCQSMSESAPEVSPPSCTRDAKKHCVPCEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTVPASYSPKWLKEHPEAGKSAAR 198 MLGGPFSRLTHISFIVHWRCMRQLFLSTPCVVLVAVSAAFQVSFSPAALSTSYCQSMSESAPEVSPPSCTRDAKKHCVPCEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTVPASYSPKWLKEHPEAGKSAAR Sbjct: 1 MLGGPFSRLTHISFIVHWRCMRQLFLSTPCVVLVAVSAAFQVSFSPAALSTSYCQSMSESAPEVSPPSCTRDAKKHCVPCEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTVPASYSPKWLKEHPEAGKSAAR 198
BLAST of EWM25234.1 vs. NCBI_GenBank
Match: gi|553185057|ref|XP_005854194.1| (transcriptional coactivator pterin dehydratase [Nannochloropsis gaditana CCMP526] >gi|553194297|ref|XP_005855923.1| transcriptional coactivator pterin dehydratase [Nannochloropsis gaditana CCMP526] >gi|422293138|gb|EKU20438.1| transcriptional coactivator pterin dehydratase [Nannochloropsis gaditana CCMP526] >gi|422294866|gb|EKU22166.1| transcriptional coactivator pterin dehydratase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 356.295 bits (913), Expect = 5.159e-124 Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0 Query: 21 MRQLFLSTPCVVLVAVSAAFQVSFSPAALSTSYCQSMSESAPEVSPPSCTRDAKKHCVPCEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTVPASYSPKWLKEHPEAGKSAAR 198 MRQL LSTPCVVLVAVSAAFQVSFSPAALSTSYC SMSESAPEVSPPSCTRDAKKHC+PCEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDT+PASYSPKWLKEHPEAGKSAAR Sbjct: 1 MRQLLLSTPCVVLVAVSAAFQVSFSPAALSTSYCNSMSESAPEVSPPSCTRDAKKHCLPCEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTIPASYSPKWLKEHPEAGKSAAR 178
BLAST of EWM25234.1 vs. NCBI_GenBank
Match: gi|1113363484|gb|OJW26967.1| (pterin-4-alpha-carbinolamine dehydratase [Planctomycetales bacterium 71-10]) HSP 1 Score: 137.117 bits (344), Expect = 2.935e-38 Identity = 64/121 (52.89%), Postives = 80/121 (66.12%), Query Frame = 0 Query: 64 VSPPSCTRDAKKHCVPCEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTVPASYSPK 184 +S P+ + CVPCEGG+P L+ E V+ +L ++ W LS D KR+ R +TAKNF A L F D VG +AE EGHHPDL LT YR V V + THA+GGL+END I+AA ID VP K Sbjct: 1 MSTPTVAELTSRKCVPCEGGVPPLAREEVEELLKAVAGWSLSSDGKRIRREWTAKNFVAGLRFFDKVGELAEAEGHHPDLSLTGYRNVAVEITTHAIGGLSENDFILAAKIDEVPIETKKK 121
BLAST of EWM25234.1 vs. NCBI_GenBank
Match: gi|1057007706|ref|WP_068419222.1| (4a-hydroxytetrahydrobiopterin dehydratase [Planctomyces sp. SH-PL62] >gi|1015457919|gb|AMV39701.1| Putative pterin-4-alpha-carbinolamine dehydratase [Planctomyces sp. SH-PL62]) HSP 1 Score: 132.88 bits (333), Expect = 1.189e-36 Identity = 60/115 (52.17%), Postives = 81/115 (70.43%), Query Frame = 0 Query: 64 VSPPSCTRDAKKHCVPCEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTVP 178 +S P+ T K CVPCEGG+P L + V A++ ++P W L +D KR+ R +TA+NF A L F+D VG +AE EGHHPDLHL YR V + + THA+GGL+END I+AA I+ +P Sbjct: 1 MSIPTLTELTSKKCVPCEGGVPPLEPDVVDALIRTVPGWTLDEDGKRIHRGWTARNFVAGLHFLDKVGELAEEEGHHPDLHLEGYRNVAIEITTHAIGGLSENDFILAAKINAIP 115
BLAST of EWM25234.1 vs. NCBI_GenBank
Match: gi|1134106546|ref|WP_076349719.1| (4a-hydroxytetrahydrobiopterin dehydratase [Paludisphaera borealis] >gi|1133586075|gb|APW63366.1| Putative pterin-4-alpha-carbinolamine dehydratase [Paludisphaera borealis]) HSP 1 Score: 126.331 bits (316), Expect = 6.095e-34 Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 0 Query: 64 VSPPSCTRDAKKHCVPCEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTVP 178 +S P+ K CVPCEG +P LS + +A+L ++ W LS D +R+ R + AKNF A + F + V A+AE EGHHPDLHL YR V + L+THA GGLTEND I+AA I+ +P Sbjct: 1 MSTPTLIELTSKKCVPCEGDVPPLSPDEAKALLEAVADWSLSHDGQRIRREWIAKNFMAGIDFFEKVAALAESEGHHPDLHLEGYRNVAIELWTHAAGGLTENDFILAAKINEIP 115
BLAST of EWM25234.1 vs. NCBI_GenBank
Match: gi|1125409139|gb|OLD42442.1| (pterin-4-alpha-carbinolamine dehydratase [Gemmatimonadetes bacterium 13_1_40CM_2_70_7]) HSP 1 Score: 125.176 bits (313), Expect = 1.154e-33 Identity = 56/110 (50.91%), Postives = 79/110 (71.82%), Query Frame = 0 Query: 68 SCTRDAKKHCVPCEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTV 177 + T AKK CVPC GG LS E+ A L ++P WR+S D K+++R+FT K+F A+ F++ V VAE +GHHPD+H+ + +VE+VL+THA+GGL END +MAA ID + Sbjct: 2 NATELAKKQCVPCRGGTAPLSAEQANAYLAAVPEWRVSADGKQIARTFTFKDFVQAMKFVNKVADVAEAQGHHPDIHI-HWNKVELVLWTHAIGGLHENDFVMAARIDNL 110
BLAST of EWM25234.1 vs. NCBI_GenBank
Match: gi|1088329184|gb|OHB79306.1| (pterin-4-alpha-carbinolamine dehydratase [Planctomycetes bacterium RBG_16_64_12]) HSP 1 Score: 124.79 bits (312), Expect = 2.402e-33 Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 0 Query: 75 KHCVPCEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTVP 178 K C CEGG+ LS +VQ L +L WRL+ D +R+ + + K+F A + F++ V +AE EGHHPDLHL YR V +VL+THAVGGLTEND I+AA ID +P Sbjct: 12 KKCTACEGGVEKLSAAQVQGQLGALSGWRLTGDEERIRKDWEVKSFRAGMEFLNRVAELAEQEGHHPDLHLEGYRHVSIVLWTHAVGGLTENDFILAAKIDQLP 115
BLAST of EWM25234.1 vs. NCBI_GenBank
Match: gi|1129169371|gb|OLP79970.1| (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Symbiodinium microadriaticum]) HSP 1 Score: 132.109 bits (331), Expect = 3.218e-33 Identity = 62/111 (55.86%), Postives = 78/111 (70.27%), Query Frame = 0 Query: 80 CEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTVPASYSPKWLKEHP 190 C P LS E V A +P LPLW LS D +SR F AKN+AAA++F++ V +AE EGHHPD+H+TSYR V V L THA+GGL+ D ++AA +D + YSPKWLKEHP Sbjct: 295 CGKDTPGLSREEVLARIPLLPLWVLSPDGASISRCFVAKNWAAAMSFLNEVSVLAEQEGHHPDVHITSYRNVRVELSTHAIGGLSLPDFVLAAKMDQIKVEYSPKWLKEHP 405
BLAST of EWM25234.1 vs. NCBI_GenBank
Match: gi|1123624913|ref|WP_074315501.1| (4a-hydroxytetrahydrobiopterin dehydratase [Singulisphaera sp. GP187] >gi|1119029654|emb|SIO60002.1| 4a-hydroxytetrahydrobiopterin dehydratase [Singulisphaera sp. GP187]) HSP 1 Score: 123.635 bits (309), Expect = 5.307e-33 Identity = 53/105 (50.48%), Postives = 74/105 (70.48%), Query Frame = 0 Query: 74 KKHCVPCEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTVP 178 +K C PCEGG+P + ++ +A L L W L+ D R+ ++TAKNF AA+ F + V +AE +GHHPDLHL YR V +VL+THA+GGL+END I+AA I+ +P Sbjct: 11 RKTCSPCEGGIPPVPVDEAKAYLTHLEGWELAADGTRIKHTWTAKNFMAAIDFFNKVAELAELDGHHPDLHLEGYRNVTIVLWTHAIGGLSENDFILAAKINQIP 115
BLAST of EWM25234.1 vs. NCBI_GenBank
Match: gi|505059250|ref|WP_015246352.1| (4a-hydroxytetrahydrobiopterin dehydratase [Singulisphaera acidiphila] >gi|430015489|gb|AGA27203.1| pterin-4a-carbinolamine dehydratase [Singulisphaera acidiphila DSM 18658]) HSP 1 Score: 123.635 bits (309), Expect = 5.726e-33 Identity = 53/105 (50.48%), Postives = 75/105 (71.43%), Query Frame = 0 Query: 74 KKHCVPCEGGLPALSIERVQAVLPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTVP 178 +K C PCEGG+P + + +A+L + W+L+ D R+ RS+TAKNF AA+ F + V +AE +GHHPDLHL YR V + L+THA+GGL+END I+AA I+ +P Sbjct: 11 RKKCSPCEGGIPPVPADEARALLTHIEGWKLADDGTRIKRSWTAKNFMAAIDFFNKVAELAEQDGHHPDLHLEGYRNVSIELWTHAIGGLSENDFILAAKINQLP 115 The following BLAST results are available for this feature:
BLAST of EWM25234.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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