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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101103g2.1352.mrna |
| Orig protein id | gnl|cribi|Naga_101103g2.1352 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1363156..1365263 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna544 ID=rna544|Name=rna544|organism=Nannochloropsis gaditana|type=mRNA|length=1105bp
ATCACAGGTGAAAGGCGGTGTTGACCGCCCTTGGCCCTGGTATCAGGTGT
AGAAAGCACTTCGCCCGCCACAGGGCTACGGACACCACTGGCTGCAAATC
GGGAGCATTGAAAAGGGGCCAAGCCATGCTGCGCCTGACCGCCAATGTGA
AACACCAAGACGCGGGCTATGTTAGGAGGCTTGGGCAGGTGTGGGGTCGG
CACCATGGACAGGATGTAAAGAGTAAGCCGCTAGGTGCGGAGGTCCCAGC
GAGGTGTTCGACGGCCTGTTTTACAGGAAATAGCACTCAGGAGCAGCAGC
AGTCGCTTCGAGTATACGACGGAAGAAGACAACCATACGGAACCAGGCAC
TTAAAGCATTCACAGCAGCCACCACGGGTAGCAAGTCGGGCCGTCCGCGT
TTTCCCACCATGTTTAACCTCCCCCTCCACCCCCTCCGCTCCTTCCTCCT
CCTGGATCTCCTCCCTTCCCCGACAAGCGACCCACTCTTCGCCCTGGTGC
TCATTTTCATTCCACCAGCCAAGGCAATGTCGGCACAAATCCTCAAGCGC
CAATTACCTCCCTCCCACCATCTCCTACCCGCCCTCCTTCCCGTCCTCCC
CCCTTCCCTCCTCCTCCCCTCCCGGCGGAACGACCTTTGTCTCTAAATAC
TACCGGATCGAAGCGGGGGACGTGATCGAATTCTTGCACCGGAAAGACCT
GACCTTCCGTGAGACAGCCTCCCACTTCATCCTGAAAGAGTGCCCGTTCT
GCCACCGTCCGACCAGGGATCAAGCGGACAACCTGTGGAAACTATACGTG
TCCAAGGACGGGGCGGCCTGGTTCTGTCACCGGTGCGGCGCCAAAGGCAG
CTGGTTTGATTTCAAGAGGGGCCTTTCCGGGAGCGGAGCGGGGTGCTTGA
ACCCGTTGAGCTCGCGGGACGGGGCGGGGGCAGAGGCGACTTGGGGAGGC
TACCCGGAGCCACTCGGTGGTGGAGGCCCCGAGGGAGGGATGGAGGTTGG
GATGGAGGGAGGGAGGGCGTATGAGCAGACGAGAGGGGCACAGGGCGAGG
CTCTGGGCAGCCTGGTGACCTCGACAAGCGTGGCAAGACATCCGGCTCCC
GCCCC back to topprotein sequence of rna544 >rna544-protein ID=rna544-protein|Name=rna544|organism=Nannochloropsis gaditana|type=polypeptide|length=609bp
MATHRQDFPHLVINRDSPAHARNIVEKSRGLEGNTEEASTTDAEPSPAQQ
FVSLQRENMHLREQVQALNEEVAVLKGKLGGRQNGHGGVAESQGKEAERA
LLVAHPPTSQVVALEAQLQASQSEKKYFQALIEEKQGVIARLQKRVEEQD
KTPHASAGLGSRMGPWPGGFDDGGEGRGAREERLARAATEAVAEVSQGAH
GEGGKAGGRSVEAPHVAGRNAGTREQVEPVDVRTFESRAESMTCPPLSIV
GVGREGATGGGTDPGRGGGREGGRGEGDRAHELLSLEGRDILTDELYEEM
QRHEYNHPRLIIRACLDCLVPLFKVPSTAGALADFRAFFEGQRSIHTRAE
EVLGNLRKGEGMSAPELDCLQRIFEVVVPPAARVPREEGVMRLEGEGQRD
EEVRRGGSAQAGVRRRRKDFMRELVTAMNAFHGIKNKKPDLAYMCARAGV
EARGLDTVEALQSGLKDHVALQQAFVQICAAMPPGQLSCNRRYVARKLFE
FCGLDASVLVAKKGLQGRKPPSRKGMRSGEGGGGRKRKVEALEELVRVDR
PRRQRKRRRWWGEEEEEDGGGGGGGGGTEGGQRGEEGEGGREGGRGRGGE
PANFDSERG back to topmRNA from alignment at CM002455.1:1363156..1365263+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna544 ID=rna544|Name=rna544|organism=Nannochloropsis gaditana|type=mRNA|length=2108bp|location=Sequence derived from alignment at CM002455.1:1363156..1365263+ (Nannochloropsis gaditana)
TCCTCAACGAAAATGTGGCTCTCTTTCCGACTTGGATGGATACTACATCA
AAAAATGCGTCCTCACGCACACAGTGCGTACACATGTGCAACATTTCATC
CGTAGAAGGGTCAcagaggacgtgatggatcTTAATCGTGCCTTAGTATT
GGTCTTTGGTGGGCAGATATGGTTGTAGCAAGGACCACGTTTCAGGGGGG
GCCCTGCGACACGGTAGCCTGTTCACAGTTTCATGAAATATTCTTCCTGA
TTATGTCACAGGCATAGGAACATCGTCCATGGCCACCCATCGGCAGGact
ttccccaccttgtTATCAACAGAGACTCACCGGCACACGCGCGAAACATT
GTGGAAAAGAGCCGGGGCTTGGAAGGTAAtacggaggaagcgagcacGAC
GGACGCAGAGCCGTCCCCGGCACAGCAATTTGTGTCTTTGCAGCGGGAGA
ATATGCACCTGCGTGAGCAAGTCCAAGCCTTGaacgaggaagtggcggtg
TTAAAGGGGAAACTTGGTGGGCGGCAGAACGGGCATGGAGGCGTTGCCGA
GTCGCAGGGGAAAGAAGCCGAACGCGCCTTATTAGTAGCCCATCCACCCA
CTTCCCAAGTCGTGGCACTGGAAGCACAGCTACAAGCGTCGCAGTCGGAG
AAGAAATATTTCCAGGCTTTGATCGAGGAGAAACAGGGCGTCATTGCTCG
GTTGCAAAAACGCGTGGAAGAGCAAGACAAGACCCCCCATGCCTCGGCGG
GCCTCGGGTCTCGGATGGGCCCATGGCCCGGCGGCTTTGAcgatggtgga
gaggggagaggcgccAGAGAGGAGAGGCTTGCAAGGGCTGCCacagaggc
cgtggcggaAGTAAGCCAAGGTGcccacggggagggcgggaaagcgggcg
ggaggagtgtGGAAGCCCCTCATGTCGCAGGGAGGAATGCGGGTACCCGC
GAGCAAGTCGAGCCTGTTGATGTCAGGACCTTCGAGTCGCGAGCCGAGTC
CATGACCTGCCCGCCCTTGTCCATCGTGGGCGTcggccgagaaggagcaa
cgggaggagggaccgacccagggcgggggggagggcgggagggaggaagg
ggggaaggagacagggcaCACGAGCTCTTGTCgttggagggaagggacat
TCTGACCGACGAATTATACGAGGAGATGCAACGGCATGAATACAACCATC
CCCGCCTCATAATCCGCGCCTGTTTGGACTGCCTCGTTCCGTTGTTTAAG
GTGCCTTCAACCGCGGGAGCCTTGGCGGattttcgcgccttttttgaAGG
GCAAAGGTCGATCCACACCCGGGCAGAGGAGGTGTTGGGAAACCTGCGGA
AGGGTGAGGGGATGAGTGCGCCGGAGCTGGACTGCTTGCAACGGATTTTT
GAAGTGGTGGTGCCACCGGCTGCCCGGGTaccaagggaggaaggggtgat
gagattggaaggagaggggcagagggacgaggaggttcggaggggcggga
gtgCCCAAGCTGGGGTGCGGCGTCGGCGGAAGGATTTCATGCGGGAACTG
GTGACGGCCATGAACGCCTTCCACGGGATAAAAAACAAAAAGCCCGACCT
GGCGTACATGTGTGCCCGGGCAGGGGTGGAAGCGCGGGGTTTGGACACGG
TGGAAGCCTTGCAAAGCGGATTGAAGGACCACGTCGCCCTCCAACAGGCA
TTCGTCCAGATTTGTGCGGCCATGCCTCCGGGACAGCTGTCGTGCAACCG
TCGGTACGTGGCCCGAAAATTGTTCGAGTTTTGCGGGTTGGATGCGAGTG
TCTTGGTGGCGAAGAAAGGTTTGCAAGGGCGGAAGCCCCCGAGCCGGAAG
GGAATGCggagtggagaaggaggaggagggaggaagaggaaggtagAGGC
GTTGGAGGAATTGGTGCGTGTGGACCGGCCACGACGGCAGCGCAAACGGC
GGCGAtggtggggagaggaggaggaggaggatgggggaggaggaggagga
ggaggagggacggaaggagggcaaaggggagaggaaggggagggagggag
ggagggaggacgaggacgaggaggagagcctgCGAATTTCGACAGCGAGC
Gaggatga back to topCoding sequence (CDS) from alignment at CM002455.1:1363156..1365263+ >rna544 ID=rna544|Name=rna544|organism=Nannochloropsis gaditana|type=CDS|length=1830bp|location=Sequence derived from alignment at CM002455.1:1363156..1365263+ (Nannochloropsis gaditana)
ATGGCCACCCATCGGCAGGactttccccaccttgtTATCAACAGAGACTC
ACCGGCACACGCGCGAAACATTGTGGAAAAGAGCCGGGGCTTGGAAGGTA
AtacggaggaagcgagcacGACGGACGCAGAGCCGTCCCCGGCACAGCAA
TTTGTGTCTTTGCAGCGGGAGAATATGCACCTGCGTGAGCAAGTCCAAGC
CTTGaacgaggaagtggcggtgTTAAAGGGGAAACTTGGTGGGCGGCAGA
ACGGGCATGGAGGCGTTGCCGAGTCGCAGGGGAAAGAAGCCGAACGCGCC
TTATTAGTAGCCCATCCACCCACTTCCCAAGTCGTGGCACTGGAAGCACA
GCTACAAGCGTCGCAGTCGGAGAAGAAATATTTCCAGGCTTTGATCGAGG
AGAAACAGGGCGTCATTGCTCGGTTGCAAAAACGCGTGGAAGAGCAAGAC
AAGACCCCCCATGCCTCGGCGGGCCTCGGGTCTCGGATGGGCCCATGGCC
CGGCGGCTTTGAcgatggtggagaggggagaggcgccAGAGAGGAGAGGC
TTGCAAGGGCTGCCacagaggccgtggcggaAGTAAGCCAAGGTGcccac
ggggagggcgggaaagcgggcgggaggagtgtGGAAGCCCCTCATGTCGC
AGGGAGGAATGCGGGTACCCGCGAGCAAGTCGAGCCTGTTGATGTCAGGA
CCTTCGAGTCGCGAGCCGAGTCCATGACCTGCCCGCCCTTGTCCATCGTG
GGCGTcggccgagaaggagcaacgggaggagggaccgacccagggcgggg
gggagggcgggagggaggaaggggggaaggagacagggcaCACGAGCTCT
TGTCgttggagggaagggacatTCTGACCGACGAATTATACGAGGAGATG
CAACGGCATGAATACAACCATCCCCGCCTCATAATCCGCGCCTGTTTGGA
CTGCCTCGTTCCGTTGTTTAAGGTGCCTTCAACCGCGGGAGCCTTGGCGG
attttcgcgccttttttgaAGGGCAAAGGTCGATCCACACCCGGGCAGAG
GAGGTGTTGGGAAACCTGCGGAAGGGTGAGGGGATGAGTGCGCCGGAGCT
GGACTGCTTGCAACGGATTTTTGAAGTGGTGGTGCCACCGGCTGCCCGGG
Taccaagggaggaaggggtgatgagattggaaggagaggggcagagggac
gaggaggttcggaggggcgggagtgCCCAAGCTGGGGTGCGGCGTCGGCG
GAAGGATTTCATGCGGGAACTGGTGACGGCCATGAACGCCTTCCACGGGA
TAAAAAACAAAAAGCCCGACCTGGCGTACATGTGTGCCCGGGCAGGGGTG
GAAGCGCGGGGTTTGGACACGGTGGAAGCCTTGCAAAGCGGATTGAAGGA
CCACGTCGCCCTCCAACAGGCATTCGTCCAGATTTGTGCGGCCATGCCTC
CGGGACAGCTGTCGTGCAACCGTCGGTACGTGGCCCGAAAATTGTTCGAG
TTTTGCGGGTTGGATGCGAGTGTCTTGGTGGCGAAGAAAGGTTTGCAAGG
GCGGAAGCCCCCGAGCCGGAAGGGAATGCggagtggagaaggaggaggag
ggaggaagaggaaggtagAGGCGTTGGAGGAATTGGTGCGTGTGGACCGG
CCACGACGGCAGCGCAAACGGCGGCGAtggtggggagaggaggaggagga
ggatgggggaggaggaggaggaggaggagggacggaaggagggcaaaggg
gagaggaaggggagggagggagggagggaggacgaggacgaggaggagag
cctgCGAATTTCGACAGCGAGCGaggatga back to top
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