EWM30129.1, cds544 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM30129.1 vs. NCBI_GenBank
Match: gi|585112780|gb|EWM30129.1| (hypothetical protein Naga_101103g2 [Nannochloropsis gaditana]) HSP 1 Score: 1210.67 bits (3131), Expect = 0.000e+0 Identity = 609/609 (100.00%), Postives = 609/609 (100.00%), Query Frame = 0
Query: 1 MATHRQDFPHLVINRDSPAHARNIVEKSRGLEGNTEEASTTDAEPSPAQQFVSLQRENMHLREQVQALNEEVAVLKGKLGGRQNGHGGVAESQGKEAERALLVAHPPTSQVVALEAQLQASQSEKKYFQALIEEKQGVIARLQKRVEEQDKTPHASAGLGSRMGPWPGGFDDGGEGRGAREERLARAATEAVAEVSQGAHGEGGKAGGRSVEAPHVAGRNAGTREQVEPVDVRTFESRAESMTCPPLSIVGVGREGATGGGTDPGRGGGREGGRGEGDRAHELLSLEGRDILTDELYEEMQRHEYNHPRLIIRACLDCLVPLFKVPSTAGALADFRAFFEGQRSIHTRAEEVLGNLRKGEGMSAPELDCLQRIFEVVVPPAARVPREEGVMRLEGEGQRDEEVRRGGSAQAGVRRRRKDFMRELVTAMNAFHGIKNKKPDLAYMCARAGVEARGLDTVEALQSGLKDHVALQQAFVQICAAMPPGQLSCNRRYVARKLFEFCGLDASVLVAKKGLQGRKPPSRKGMRSGEGGGGRKRKVEALEELVRVDRPRRQRKRRRWWGEEEEEDGGGGGGGGGTEGGQRGEEGEGGREGGRGRGGEPANFDSERG 609
MATHRQDFPHLVINRDSPAHARNIVEKSRGLEGNTEEASTTDAEPSPAQQFVSLQRENMHLREQVQALNEEVAVLKGKLGGRQNGHGGVAESQGKEAERALLVAHPPTSQVVALEAQLQASQSEKKYFQALIEEKQGVIARLQKRVEEQDKTPHASAGLGSRMGPWPGGFDDGGEGRGAREERLARAATEAVAEVSQGAHGEGGKAGGRSVEAPHVAGRNAGTREQVEPVDVRTFESRAESMTCPPLSIVGVGREGATGGGTDPGRGGGREGGRGEGDRAHELLSLEGRDILTDELYEEMQRHEYNHPRLIIRACLDCLVPLFKVPSTAGALADFRAFFEGQRSIHTRAEEVLGNLRKGEGMSAPELDCLQRIFEVVVPPAARVPREEGVMRLEGEGQRDEEVRRGGSAQAGVRRRRKDFMRELVTAMNAFHGIKNKKPDLAYMCARAGVEARGLDTVEALQSGLKDHVALQQAFVQICAAMPPGQLSCNRRYVARKLFEFCGLDASVLVAKKGLQGRKPPSRKGMRSGEGGGGRKRKVEALEELVRVDRPRRQRKRRRWWGEEEEEDGGGGGGGGGTEGGQRGEEGEGGREGGRGRGGEPANFDSERG
Sbjct: 1 MATHRQDFPHLVINRDSPAHARNIVEKSRGLEGNTEEASTTDAEPSPAQQFVSLQRENMHLREQVQALNEEVAVLKGKLGGRQNGHGGVAESQGKEAERALLVAHPPTSQVVALEAQLQASQSEKKYFQALIEEKQGVIARLQKRVEEQDKTPHASAGLGSRMGPWPGGFDDGGEGRGAREERLARAATEAVAEVSQGAHGEGGKAGGRSVEAPHVAGRNAGTREQVEPVDVRTFESRAESMTCPPLSIVGVGREGATGGGTDPGRGGGREGGRGEGDRAHELLSLEGRDILTDELYEEMQRHEYNHPRLIIRACLDCLVPLFKVPSTAGALADFRAFFEGQRSIHTRAEEVLGNLRKGEGMSAPELDCLQRIFEVVVPPAARVPREEGVMRLEGEGQRDEEVRRGGSAQAGVRRRRKDFMRELVTAMNAFHGIKNKKPDLAYMCARAGVEARGLDTVEALQSGLKDHVALQQAFVQICAAMPPGQLSCNRRYVARKLFEFCGLDASVLVAKKGLQGRKPPSRKGMRSGEGGGGRKRKVEALEELVRVDRPRRQRKRRRWWGEEEEEDGGGGGGGGGTEGGQRGEEGEGGREGGRGRGGEPANFDSERG 609
BLAST of EWM30129.1 vs. NCBI_GenBank
Match: gi|553192358|ref|XP_005855559.1| (hypothetical protein NGA_0594200 [Nannochloropsis gaditana CCMP526] >gi|422293508|gb|EKU20808.1| hypothetical protein NGA_0594200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 329.717 bits (844), Expect = 2.636e-107 Identity = 170/172 (98.84%), Postives = 171/172 (99.42%), Query Frame = 0
Query: 59 MHLREQVQALNEEVAVLKGKLGGRQNGHGGVAESQGKEAERALLVAHPPTSQVVALEAQLQASQSEKKYFQALIEEKQGVIARLQKRVEEQDKTPHASAGLGSRMGPWPGGFDDGGEGRGAREERLARAATEAVAEVSQGAHGEGGKAGGRSVEAPHVAGRNAGTREQVEPV 230
MHLREQVQALNEEVAVLKGKLGGRQNGHGGVAESQGKEAERALLVAHPPTSQVVALEAQLQASQSEKKYFQALIEEKQGVIARLQKRV EQDKTPHASAGLGSRMGPWPGGFDDGGEGRGAREERLARAATEAVAEVSQGAHGEGGKAGGRSVEAP+VAGRNAGTREQVEPV
Sbjct: 1 MHLREQVQALNEEVAVLKGKLGGRQNGHGGVAESQGKEAERALLVAHPPTSQVVALEAQLQASQSEKKYFQALIEEKQGVIARLQKRVGEQDKTPHASAGLGSRMGPWPGGFDDGGEGRGAREERLARAATEAVAEVSQGAHGEGGKAGGRSVEAPYVAGRNAGTREQVEPV 172
BLAST of EWM30129.1 vs. NCBI_GenBank
Match: gi|585106175|gb|EWM24653.1| (hypothetical protein Naga_100055g3 [Nannochloropsis gaditana]) HSP 1 Score: 92.4337 bits (228), Expect = 2.387e-19 Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 0
Query: 4 HRQDFPHLVINRDSPAHARNIVEKSRGLEGNTEEASTTDAEPSPAQ 49
HRQDFPHLVINRDSPAHA+N+VEKSRGLEGNTEEA+TTDAEPS AQ
Sbjct: 32 HRQDFPHLVINRDSPAHAQNLVEKSRGLEGNTEEATTTDAEPSLAQ 77 The following BLAST results are available for this feature:
BLAST of EWM30129.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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