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Properties
| Property Name | Value |
|---|
| Product | t7-like mitochondrial dna helicase |
| Orig transcript id | gnl|cribi|Naga_101103g1.1353.mrna |
| Orig protein id | gnl|cribi|Naga_101103g1.1353 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1361750..1362854 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna543 ID=rna543|Name=rna543|organism=Nannochloropsis gaditana|type=mRNA|length=1940bp
CGTCCCGCATGTCCCCTTCCGAGCTGGGCCAACGCCTCCGCGAGTACCAG
TACGCCTTGATGGACGACCCGTCCCACCGGCACGTCCGGGACTGGCTCAC
CGGGAAAGCGCCGGGGCAACGCGGTCTGACCCCCACCGTCCTAAGGAAGT
ACGGGGTCGGGTGCGGTACGTTCTCCTTTATGAACGACCAAAACGTCTTC
GAACCCACGGAGTGCGTGGTCTTCCCCTGGATGCTTCCCTTGCCCGGCAA
ATCCCCCCCCCGGCACGCCCTCCCTCCCGGCCTCCCCCCCGTCCTCCGCC
CCGACCTGGGTGCCTCGGCGCTGCAAGGTCCGGGCCATGAAGCAGAAGGC
GTGGCAGCGGCTGTACCCCTCCCCCTCCGCGGGATGGGGCCTCTTTGGTC
TCCACACAGTGGGCGCGGACGCTAAGGAGATCATTCTGACGGAAGGGGAG
TTCGACGCCATGGCGGTCTACCAGGCCACGCGCCGGGCGGCCGTTTCTCT
CCCCAACGGCTGTCGATCGTTACCGGTTGAAGTCCTCCCGTTGCTCGAGC
GTTTCGAGCGGATTTTGTTGTGGATGGACAACGACACGCCGGGCATTGAA
GGCGCGGAAAAGTTCGCGAATAAATTGGGGGCCCGCCGCACCTTTATCGT
CCGAGCGCTCCCGGAGGACCTCGACCCCCCCAAGGACGCCAACGACGCCC
TGCTTCGAAATTTGAATTTGGAACGGATGATTCAAAATGCGCAACGGCTC
CCCGACACGCGTGTCATCCGTTTCTCCGACCTTCGCCCCTTGGTGTTTGA
CGAGCTGCGGAACCGGGACAAGCACGAAGGCGTCTCGGCCAAGTCTTTCC
CGGGCCTCATGGCGCTGCTGAAAGGCTTCCGGAAGGGGGAGATGACGGTC
TTGACAGGCCCCACGGGCGCGGGGAAAACCACCTTCCTCTCCCAGCTCTC
CCTGGACCTGGCTCGGGGGGGCATGAACACGCTGTGGGGGTCGTTTGAGG
TGCAAAACGTCAAGTTGATCGAGAAGATGATGCGGCAATACCACGCCGCC
CCGTTGCCCATGGGGGATTTGAAAAGCTTGGACGCGGTGGCCGACCGGTT
TGGGCAGCTCCCGCTCATGTTCATGCGGTTTCATGGCAGCTCGAACGTGG
AAGAGGTTGTTGATGCGATGGAATACTGTGCCTATGTGCATGATACGGAG
TTGGTGGTGCTGGACAATCTCCAGTTCATGATGGCCATGGGGAGCCGGGA
AGGGGGAATGGGGGGGGGGAAGGGGGGCTTTGACCGATTTTATCAGATGG
ACGTGGCGGTGGAGAAATTCCGACGCTTTGCCACGGAGAAGAACATCCAC
GTGATATTGGTGGTGCACCCCCGCAAGGAGAGCGATCAGTTCCGTCTCGG
AATTTCCTCCTTCTCGGGCACGGCCAAGGCGACGCAGGACGCGGACAACG
TGGTCATTCTCCAACGCCACCAAGGCCGTCACTACCTGGACGTGCGGAAG
AATCGGTACGACGGGGACCTGGGCGTGGTCCCCCTGGCCTTCCAGAAGCA
GACGGGCACGTTGGTGGAGGTGGAGGACAACGGGTTGGGCTTGAGTTTGG
AGCGGGAAAGCATGTACGGCGGGGGGGGTTGGAAGTCGATGGGTGGGGGC
GGGGGGGGGATCGGCCGGTGGTTCGGGAGAAAACGTCGCATTGATTGGCG
TCCATGGATGGTGGGGGGCGGGGGGGAGGTTGTACGGTAGGACGGTGGAA
GGAGGAAGGGGGGGGGGGGGAAGGAAACTGAGGGGAGGGCTCACAGTAAA
GGAGTGGCTGAATCACAGAGAGGATAAAAAGTAAGATAATCGTAAAGATA
CGGTCCCCGTCGTGGCGTATTCCCTGACTGGCCGATCTCCAGTGGCGGCT
TTACCACAGATACTTGTATATTGGGGGGGGAACCCCTTTT back to topprotein sequence of rna543 >rna543-protein ID=rna543-protein|Name=rna543|organism=Nannochloropsis gaditana|type=polypeptide|length=327bp
MLRLTANVKHQDAGYVRRLGQVWGRHHGQDVKSKPLGAEVPARCSTACFT
GNSTQEQQQSLRVYDGRRQPYGTRHLKHSQQPPRVASRAVRVFPPCLTSP
STPSAPSSSWISSLPRQATHSSPWCSFSFHQPRQCRHKSSSANYLPPTIS
YPPSFPSSPLPSSSPPGGTTFVSKYYRIEAGDVIEFLHRKDLTFRETASH
FILKECPFCHRPTRDQADNLWKLYVSKDGAAWFCHRCGAKGSWFDFKRGL
SGSGAGCLNPLSSRDGAGAEATWGGYPEPLGGGGPEGGMEVGMEGGRAYE
QTRGAQGEALGSLVTSTSVARHPAPAP back to topmRNA from alignment at CM002455.1:1361750..1362854- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna543 ID=rna543|Name=rna543|organism=Nannochloropsis gaditana|type=mRNA|length=1105bp|location=Sequence derived from alignment at CM002455.1:1361750..1362854- (Nannochloropsis gaditana)
ATCACAGGTGAAAGGCGGTGTTGACCGCCCTTGGCCCTGGTATCAGGTGT
AGAAAGCACTTCGCCCGCCACAGGGCTACGGACACCACTGGCTGCAAATC
GGGAGCATTGAAAAGGGGCCAAGCCATGCTGCGCCTGACCGCCAATGTGA
AACACCAAGACGCGGGCTATGTTAGGAGGCTTGGGCAGGTGTGGGGTCGG
CACCATGGACAGGATGTAAAGAGTAAGCCGCTAGGTGCGGAGGTCCCAGC
GAGGTGTTCGACGGCCTGTTTTACAGGAAATAGCACTCAGGAGCAGCAGC
AGTCGCTTCGAGTATACGACGGAAGAAGACAACCATACGGAACCAGGCAC
TTAAAGCATTCACAGCAGCCACCACGGGTAGCAAGTCGGGCCGTCCGCGT
TTTCCCACCATGTTTAACCTCCCCCTCCACCCCCTCCGCTCCTTCCTCCT
CCTGGATCTCCTCCCTTCCCCGACAAGCGACCCACTCTTCGCCCTGGTGC
TCATTTTCATTCCACCAGCCAAGGCAATGTCGGCACAAATCCTCAAGCGC
CAATTACCTCCCTCCCACCATCTCCTACCCGCCCTCCTTCCCGTCCTCCC
CCCTTCCCTCCTCCTCCCCTCCCGGCGGAACGACCTTTGTCTCTAAATAC
TACCGGATCGAAGCGGGGGACGTGATCGAATTCTTGCACCGGAAAGACCT
GACCTTCCGTGAGACAGCCTCCCACTTCATCCTGAAAGAGTGCCCGTTCT
GCCACCGTCCGACCAGGGATCAAGCGGACAACCTGTGGAAACTATACGTG
TCCAAGGACGGGGCGGCCTGGTTCTGTCACCGGTGCGGCGCCAAAGGCAG
CTGGTTTGATTTCAAGAGGGGCCTTTCCGGGAGCGGAGCGGGGTGCTTGA
ACCCGTTGAGCTCGCGGGACGGGGCGGGGGCAGAGGCGACTTGGGGAGGC
TACCCGGAGCCACTCGGTGGTGGAGGCCCCGAGGGAGGGATGGAGGTTGG
GATGGAGGGAGGGAGGGCGTATGAGCAGACGAGAGGGGCACAGGGCGAGG
CTCTGGGCAGCCTGGTGACCTCGACAAGCGTGGCAAGACATCCGGCTCCC
GCCCC back to topCoding sequence (CDS) from alignment at CM002455.1:1361750..1362854- >rna543 ID=rna543|Name=rna543|organism=Nannochloropsis gaditana|type=CDS|length=980bp|location=Sequence derived from alignment at CM002455.1:1361750..1362854- (Nannochloropsis gaditana)
ATGCTGCGCCTGACCGCCAATGTGAAACACCAAGACGCGGGCTATGTTAG
GAGGCTTGGGCAGGTGTGGGGTCGGCACCATGGACAGGATGTAAAGAGTA
AGCCGCTAGGTGCGGAGGTCCCAGCGAGGTGTTCGACGGCCTGTTTTACA
GGAAATAGCACTCAGGAGCAGCAGCAGTCGCTTCGAGTATACGACGGAAG
AAGACAACCATACGGAACCAGGCACTTAAAGCATTCACAGCAGCCACCAC
GGGTAGCAAGTCGGGCCGTCCGCGTTTTCCCACCATGTTTAACCTCCCCC
TCCACCCCCTCCGCTCCTTCCTCCTCCTGGATCTCCTCCCTTCCCCGACA
AGCGACCCACTCTTCGCCCTGGTGCTCATTTTCATTCCACCAGCCAAGGC
AATGTCGGCACAAATCCTCAAGCGCCAATTACCTCCCTCCCACCATCTCC
TACCCGCCCTCCTTCCCGTCCTCCCCCCTTCCCTCCTCCTCCCCTCCCGG
CGGAACGACCTTTGTCTCTAAATACTACCGGATCGAAGCGGGGGACGTGA
TCGAATTCTTGCACCGGAAAGACCTGACCTTCCGTGAGACAGCCTCCCAC
TTCATCCTGAAAGAGTGCCCGTTCTGCCACCGTCCGACCAGGGATCAAGC
GGACAACCTGTGGAAACTATACGTGTCCAAGGACGGGGCGGCCTGGTTCT
GTCACCGGTGCGGCGCCAAAGGCAGCTGGTTTGATTTCAAGAGGGGCCTT
TCCGGGAGCGGAGCGGGGTGCTTGAACCCGTTGAGCTCGCGGGACGGGGC
GGGGGCAGAGGCGACTTGGGGAGGCTACCCGGAGCCACTCGGTGGTGGAG
GCCCCGAGGGAGGGATGGAGGTTGGGATGGAGGGAGGGAGGGCGTATGAG
CAGACGAGAGGGGCACAGGGCGAGGCTCTGGGCAGCCTGGTGACCTCGAC
AAGCGTGGCAAGACATCCGGCTCCCGCCCC back to top
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