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Properties
| Property Name | Value |
|---|
| Product | patatin-like serine |
| Orig transcript id | gnl|cribi|Naga_100677g1.7975.mrna |
| Orig protein id | gnl|cribi|Naga_100677g1.7975 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:919431..921958 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5402 ID=rna5402|Name=rna5402|organism=Nannochloropsis gaditana|type=mRNA|length=544bp
AGGGAACTACACCTTCCAGGAGGCTTTTGACCGGACGGGAAGGATCCTCA
ACATCATCGTCGCCCCCGCCAACAACTCGGACCCCCCCCGCCTCCTCAAC
TACCTCACCTCCCCCCACGTCCTTGTCTGGTCTGCCGCCGCCGTCTCCTC
GGCGGCTCCGGGTATCTTTGAACCAGGCTATCTCTACGTGCGCCAAGCGG
ACGGATCGGAACGCCCCGAATCCTCCTGCAAATGGTACGACGGCTCGGTG
GAGAAGGATTTGCCCATGGAACAGCTGGCGGAGCTCTTCAACATCAACCA
CTTCCTCGTCTCCCAGGTCAACCCGCAAGCCACCCTCTTCTCCTCCGTAG
CCCTTCCCCAGCGGATATGGGCCTCCCCGCTCTTGGCTGTCTTGGCCCAT
GTCATGCAATTTTGCAAACGTCAGTTCCGGTCCTGGTGCCGGAATTTCTT
CCAGCTCTTGGAGTCCAGCCGGCATCAAGGTAGGCCGACGAAGGGAAGGG
AAAGGAAGGGGGGAAGGGTTGATCTAGGAGGGGGGGGGGGTTGA back to topprotein sequence of rna5402 >rna5402-protein ID=rna5402-protein|Name=rna5402|organism=Nannochloropsis gaditana|type=polypeptide|length=377bp
MVGYEKRYDQRFLLLPRWPRIAGNRTRFSIPAAMASDRGTGPGVLFAIDK
GVQQLISSLSETGARLGRVRDVDIHRLGYLVDRLLESLHHNLPEAERLLY
SWADTIFAPKVVLRQYLMALGLEMTLFIYHLCYRLGARLVNRMTVKGRQI
SETRRRMAKAKNYYEWLKCAERMDELEGKNRWREVPESTLYNHRMLQEKI
NQFNNMMQNGDVFQLMFVLRGGISRNQFGLLNEGLYQHAYSGTKKIVERY
LEVVVKALNFVCDVNPSLDNISADVKLAFFNETRHAFGRTALLLSGGAGL
GFYHVGFVKALFDQGILPRVLSGASAGSIISSMIGVRTDDELYAMFTDGI
ARLDFFKLYKRRTKAAAAATATSGAGC back to topmRNA from alignment at CM002465.1:919431..921958- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5402 ID=rna5402|Name=rna5402|organism=Nannochloropsis gaditana|type=mRNA|length=2528bp|location=Sequence derived from alignment at CM002465.1:919431..921958- (Nannochloropsis gaditana)
ATGGTTGGTATGAGCTGTGTGCGGGCCATGCATGAATGGGAGAGGGGGGT
CGTCGGATGGCAAGCGTAGGGAATACGAGGAAAGGCGTGTCACGCCTCCC
CCGGCCTTTCGCCTTGGCCCAAGGGTATATGCACCGGGTTGAAGGAATGA
ATGAATACGACATCACGAGGGCAAGCGACGATTCGTCCGACACGAGGAGA
TGCTCTCCAATTTAAAATCGGGGAGGACGTTGCAACAATTCCTCCATGTG
ACCTTCCGACCTGAGGATACTACCCGTGACGTCAAATAGGACATACAACC
CAGCGCCCCTCGCTCTGTTCTCACTCCCTCTCCTCCTTTCTATCTCCCAT
CCGAAGGCCTGTGGCCAGGCAAGCGCGGTTATATATCCTGCGCGCAACCA
TGATGGTGACGGCACTGGTGTAAAGCAGGGTACGAGAAACGGTATGATCA
ACGCTTTCTGCTCTTACCCCGTTGGCCTCGAATAGCTGGAAACAGAACTC
GTAAGCTCGCCATTGCACCCTCGAGACAGTCGCTATCGTTGCTTTCGTCT
CCATTATCTTTCCTCGCTTGCGACACTGGCCCCGGATTGACACCGTTTTG
ACCCCTTCCGACCTCAGCGCACCCTCCTTCCCACCTTCCCTTTTTTCTTC
CTCTCTCCCTCTCCTGGTACTGGGTCAGGGTTCTCAATCCCTGCAGCCAT
GGCCTCGGATCGAGGCACAGGTCCTGGCGTCCTCTTTGCTATCGACAAAG
GCGTGCAACAACTTATCTCGTCGCTCTCCGAGACCGGCGCCCGGTTGGGG
CGCGTGAGGGATGTCGACATCCATCGTCTCGGCTATTTGGTGGACCGGCT
CTTAGAAAGCCTCCACCACAACCTTCCCGAAGCCGAGCGCCTTCTGTACT
CGTGGGCGGACACAATTTTTGCGCCAAAAGTGGTGCTGCGCCAGTATTTG
ATGGCCTTGGGCTTGGAAATGACGCTCTTCATCTACCACCTGTGTTACCG
CCTGGGCGCGCGCCTGGTGAATCGGATGACCGTAAAAGGCCGACAAATCT
CCGAGACTCGTCGGAGAATGGCCAAGGCGAAGAACTACTACGAATGGCTG
AAATGCGCGGAGCGGATGGACGAGTTGGAAGGGAAGAACCGGTGGCGGGA
GGTTCCGGAGAGCACCCTCTACAACCATCGCATGCTCCAAGAGAAGATCA
ATCAGTTCAACAACATGATGCAAAATGGGGACGTGTTTCAGCTTATGTTC
GTCCTCCGGGGGGGGATCAGCCGGAACCAGTTCGGCCTCTTGAATGAGGG
CCTGTACCAGCATGCTTACTCCGGTACCAAGAAGATCGTGGAGCGATACC
TGGAGGTGAGGAGGAGGGGAGGGAGCCGGTGCTTGCCTCGGCGAAAAACG
ACGGTATACGTATATGCCCATCGTCGTTTCCGTTAGGGTTTTTGCTTCCA
ATGCGTGTAGTGAGTTCCTAGTCCCTGGTGGAGGGTGTCGCCTTCAGCAT
CTCCGAGGCTCTTTCCCTTCCCGTCTTCCCCCCCCTCCCTCCCCCTGTAG
CACACAGCTTGCACTCTATGTAAATGTCCTGTATGCCTCCTTTCCCTTGA
TTCTTCCCCCCCCCTTCCCTCCCGTCGCTTTCCTGCCCCCCCCAAAGGTG
GTGGTGAAAGCCTTGAATTTCGTGTGCGACGTGAACCCCAGCCTCGACAA
CATTAGCGCGGACGTAAAACTCGCGTTTTTCAACGAGACACGCCATGCCT
TTGGACGCACCGCCTTGTTGCTGAGTGGGGGGGCGGGGCTCGGATTCTAC
CATGTCGGTTTCGTCAAGGCTCTCTTTGATCAGGTGCGGGGGCCGGGGGC
ACCTCCGGGTAGCGTGTTGGAAGACGGGGTCGTCGATGTGCGGGAGGAAT
CACCACCGCAGGGCTTGGGTGCATGGGCGTGGAAGCCTTTGCCTGGCGTT
GGTTTCTTCGTTGGCGCGCCACACATGGTCATGCCAGACTACTAGGAGTA
GTACCATCTAACCTTTATCCATCTTCCTCCGTCTTTTCGAGCAGGGCATC
CTCCCCAGGGTCCTCTCCGGGGCCTCGGCGGGGTCCATCATCTCCTCCAT
GATCGGCGTACGCACTGACGACGAACTCTACGCCATGTTCACGGATGGGA
TCGCCCGCTTGGACTTCTTCAAACTCTACAAACGGAGGACGAAAGCGGCG
GCGGCGGCGACGGCGTACGGGAAAAAAAACACCGCCCGGCCCTTGCCCAG
CCCGCCGGGCAATGGGCAGGGCGGGGGAGAGGGGTCGCTGGGCGACAGGG
GCGAAGAGGCGGGACGGAGAGAGGGAGGGAGGGAGGGACGGAGGGAGGGA
CGGAGGGCTTCGTTCGAGTCGTCCACCTTCGGTTTGGGGGGAGGGGGAGG
GAAGAGCGTGTTAGAGCCGGCCCAGGTGGCGTTTGGGGAGGTGCTGCGCG
AGTTGCTGCTGGAGGTGTTCTGGTATGGGGACGGCGTCTTCTTGATGGAC
ACGGAGCACTTCCGGCGCCGGTTGCTGA back to topCoding sequence (CDS) from alignment at CM002465.1:919431..921958- >rna5402 ID=rna5402|Name=rna5402|organism=Nannochloropsis gaditana|type=CDS|length=6804bp|location=Sequence derived from alignment at CM002465.1:919431..921958- (Nannochloropsis gaditana)
CACTTCCGGCGCCGGTTGCTGAGGCATCCTCCCCAGGGTCCTCTCCGGGG
CCTCGGCGGGGTCCATCATCTCCTCCATGATCGGCGTACGCACTGACGAC
GAACTCTACGCCATGTTCACGGATGGGATCGCCCGCTTGGACTTCTTCAA
ACTCTACAAACGGAGGACGAAAGCGGCGGCGGCGGCGACGGCGTGGTGGT
GAAAGCCTTGAATTTCGTGTGCGACGTGAACCCCAGCCTCGACAACATTA
GCGCGGACGTAAAACTCGCGTTTTTCAACGAGACACGCCATGCCTTTGGA
CGCACCGCCTTGTTGCTGAGTGGGGGGGCGGGGCTCGGATTCTACCATGT
CGGTTTCGTCAAGGCTCTCTTTGATCAGGGTTCTCAATCCCTGCAGCCAT
GGCCTCGGATCGAGGCACAGGTCCTGGCGTCCTCTTTGCTATCGACAAAG
GCGTGCAACAACTTATCTCGTCGCTCTCCGAGACCGGCGCCCGGTTGGGG
CGCGTGAGGGATGTCGACATCCATCGTCTCGGCTATTTGGTGGACCGGCT
CTTAGAAAGCCTCCACCACAACCTTCCCGAAGCCGAGCGCCTTCTGTACT
CGTGGGCGGACACAATTTTTGCGCCAAAAGTGGTGCTGCGCCAGTATTTG
ATGGCCTTGGGCTTGGAAATGACGCTCTTCATCTACCACCTGTGTTACCG
CCTGGGCGCGCGCCTGGTGAATCGGATGACCGTAAAAGGCCGACAAATCT
CCGAGACTCGTCGGAGAATGGCCAAGGCGAAGAACTACTACGAATGGCTG
AAATGCGCGGAGCGGATGGACGAGTTGGAAGGGAAGAACCGGTGGCGGGA
GGTTCCGGAGAGCACCCTCTACAACCATCGCATGCTCCAAGAGAAGATCA
ATCAGTTCAACAACATGATGCAAAATGGGGACGTGTTTCAGCTTATGTTC
GTCCTCCGGGGGGGGATCAGCCGGAACCAGTTCGGCCTCTTGAATGAGGG
CCTGTACCAGCATGCTTACTCCGGTACCAAGAAGATCGTGGAGCGATACC
TGGAGGGTACGAGAAACGGTATGATCAACGCTTTCTGCTCTTACCCCGTT
GGCCTCGAATAGCTGGAAACAGAACTCATGGTTGCACTTCCGGCGCCGGT
TGCTGAGGCATCCTCCCCAGGGTCCTCTCCGGGGCCTCGGCGGGGTCCAT
CATCTCCTCCATGATCGGCGTACGCACTGACGACGAACTCTACGCCATGT
TCACGGATGGGATCGCCCGCTTGGACTTCTTCAAACTCTACAAACGGAGG
ACGAAAGCGGCGGCGGCGGCGACGGCGTGGTGGTGAAAGCCTTGAATTTC
GTGTGCGACGTGAACCCCAGCCTCGACAACATTAGCGCGGACGTAAAACT
CGCGTTTTTCAACGAGACACGCCATGCCTTTGGACGCACCGCCTTGTTGC
TGAGTGGGGGGGCGGGGCTCGGATTCTACCATGTCGGTTTCGTCAAGGCT
CTCTTTGATCAGGGTTCTCAATCCCTGCAGCCATGGCCTCGGATCGAGGC
ACAGGTCCTGGCGTCCTCTTTGCTATCGACAAAGGCGTGCAACAACTTAT
CTCGTCGCTCTCCGAGACCGGCGCCCGGTTGGGGCGCGTGAGGGATGTCG
ACATCCATCGTCTCGGCTATTTGGTGGACCGGCTCTTAGAAAGCCTCCAC
CACAACCTTCCCGAAGCCGAGCGCCTTCTGTACTCGTGGGCGGACACAAT
TTTTGCGCCAAAAGTGGTGCTGCGCCAGTATTTGATGGCCTTGGGCTTGG
AAATGACGCTCTTCATCTACCACCTGTGTTACCGCCTGGGCGCGCGCCTG
GTGAATCGGATGACCGTAAAAGGCCGACAAATCTCCGAGACTCGTCGGAG
AATGGCCAAGGCGAAGAACTACTACGAATGGCTGAAATGCGCGGAGCGGA
TGGACGAGTTGGAAGGGAAGAACCGGTGGCGGGAGGTTCCGGAGAGCACC
CTCTACAACCATCGCATGCTCCAAGAGAAGATCAATCAGTTCAACAACAT
GATGCAAAATGGGGACGTGTTTCAGCTTATGTTCGTCCTCCGGGGGGGGA
TCAGCCGGAACCAGTTCGGCCTCTTGAATGAGGGCCTGTACCAGCATGCT
TACTCCGGTACCAAGAAGATCGTGGAGCGATACCTGGAGGGTACGAGAAA
CGGTATGATCAACGCTTTCTGCTCTTACCCCGTTGGCCTCGAATAGCTGG
AAACAGAACTCATGGTTGCACTTCCGGCGCCGGTTGCTGAGGCATCCTCC
CCAGGGTCCTCTCCGGGGCCTCGGCGGGGTCCATCATCTCCTCCATGATC
GGCGTACGCACTGACGACGAACTCTACGCCATGTTCACGGATGGGATCGC
CCGCTTGGACTTCTTCAAACTCTACAAACGGAGGACGAAAGCGGCGGCGG
CGGCGACGGCGTGGTGGTGAAAGCCTTGAATTTCGTGTGCGACGTGAACC
CCAGCCTCGACAACATTAGCGCGGACGTAAAACTCGCGTTTTTCAACGAG
ACACGCCATGCCTTTGGACGCACCGCCTTGTTGCTGAGTGGGGGGGCGGG
GCTCGGATTCTACCATGTCGGTTTCGTCAAGGCTCTCTTTGATCAGGGTT
CTCAATCCCTGCAGCCATGGCCTCGGATCGAGGCACAGGTCCTGGCGTCC
TCTTTGCTATCGACAAAGGCGTGCAACAACTTATCTCGTCGCTCTCCGAG
ACCGGCGCCCGGTTGGGGCGCGTGAGGGATGTCGACATCCATCGTCTCGG
CTATTTGGTGGACCGGCTCTTAGAAAGCCTCCACCACAACCTTCCCGAAG
CCGAGCGCCTTCTGTACTCGTGGGCGGACACAATTTTTGCGCCAAAAGTG
GTGCTGCGCCAGTATTTGATGGCCTTGGGCTTGGAAATGACGCTCTTCAT
CTACCACCTGTGTTACCGCCTGGGCGCGCGCCTGGTGAATCGGATGACCG
TAAAAGGCCGACAAATCTCCGAGACTCGTCGGAGAATGGCCAAGGCGAAG
AACTACTACGAATGGCTGAAATGCGCGGAGCGGATGGACGAGTTGGAAGG
GAAGAACCGGTGGCGGGAGGTTCCGGAGAGCACCCTCTACAACCATCGCA
TGCTCCAAGAGAAGATCAATCAGTTCAACAACATGATGCAAAATGGGGAC
GTGTTTCAGCTTATGTTCGTCCTCCGGGGGGGGATCAGCCGGAACCAGTT
CGGCCTCTTGAATGAGGGCCTGTACCAGCATGCTTACTCCGGTACCAAGA
AGATCGTGGAGCGATACCTGGAGGGTACGAGAAACGGTATGATCAACGCT
TTCTGCTCTTACCCCGTTGGCCTCGAATAGCTGGAAACAGAACTCATGGT
TGCACTTCCGGCGCCGGTTGCTGAGGCATCCTCCCCAGGGTCCTCTCCGG
GGCCTCGGCGGGGTCCATCATCTCCTCCATGATCGGCGTACGCACTGACG
ACGAACTCTACGCCATGTTCACGGATGGGATCGCCCGCTTGGACTTCTTC
AAACTCTACAAACGGAGGACGAAAGCGGCGGCGGCGGCGACGGCGTGGTG
GTGAAAGCCTTGAATTTCGTGTGCGACGTGAACCCCAGCCTCGACAACAT
TAGCGCGGACGTAAAACTCGCGTTTTTCAACGAGACACGCCATGCCTTTG
GACGCACCGCCTTGTTGCTGAGTGGGGGGGCGGGGCTCGGATTCTACCAT
GTCGGTTTCGTCAAGGCTCTCTTTGATCAGGGTTCTCAATCCCTGCAGCC
ATGGCCTCGGATCGAGGCACAGGTCCTGGCGTCCTCTTTGCTATCGACAA
AGGCGTGCAACAACTTATCTCGTCGCTCTCCGAGACCGGCGCCCGGTTGG
GGCGCGTGAGGGATGTCGACATCCATCGTCTCGGCTATTTGGTGGACCGG
CTCTTAGAAAGCCTCCACCACAACCTTCCCGAAGCCGAGCGCCTTCTGTA
CTCGTGGGCGGACACAATTTTTGCGCCAAAAGTGGTGCTGCGCCAGTATT
TGATGGCCTTGGGCTTGGAAATGACGCTCTTCATCTACCACCTGTGTTAC
CGCCTGGGCGCGCGCCTGGTGAATCGGATGACCGTAAAAGGCCGACAAAT
CTCCGAGACTCGTCGGAGAATGGCCAAGGCGAAGAACTACTACGAATGGC
TGAAATGCGCGGAGCGGATGGACGAGTTGGAAGGGAAGAACCGGTGGCGG
GAGGTTCCGGAGAGCACCCTCTACAACCATCGCATGCTCCAAGAGAAGAT
CAATCAGTTCAACAACATGATGCAAAATGGGGACGTGTTTCAGCTTATGT
TCGTCCTCCGGGGGGGGATCAGCCGGAACCAGTTCGGCCTCTTGAATGAG
GGCCTGTACCAGCATGCTTACTCCGGTACCAAGAAGATCGTGGAGCGATA
CCTGGAGGGTACGAGAAACGGTATGATCAACGCTTTCTGCTCTTACCCCG
TTGGCCTCGAATAGCTGGAAACAGAACTCATGGTTGCACTTCCGGCGCCG
GTTGCTGAGGCATCCTCCCCAGGGTCCTCTCCGGGGCCTCGGCGGGGTCC
ATCATCTCCTCCATGATCGGCGTACGCACTGACGACGAACTCTACGCCAT
GTTCACGGATGGGATCGCCCGCTTGGACTTCTTCAAACTCTACAAACGGA
GGACGAAAGCGGCGGCGGCGGCGACGGCGTGGTGGTGAAAGCCTTGAATT
TCGTGTGCGACGTGAACCCCAGCCTCGACAACATTAGCGCGGACGTAAAA
CTCGCGTTTTTCAACGAGACACGCCATGCCTTTGGACGCACCGCCTTGTT
GCTGAGTGGGGGGGCGGGGCTCGGATTCTACCATGTCGGTTTCGTCAAGG
CTCTCTTTGATCAGGGTTCTCAATCCCTGCAGCCATGGCCTCGGATCGAG
GCACAGGTCCTGGCGTCCTCTTTGCTATCGACAAAGGCGTGCAACAACTT
ATCTCGTCGCTCTCCGAGACCGGCGCCCGGTTGGGGCGCGTGAGGGATGT
CGACATCCATCGTCTCGGCTATTTGGTGGACCGGCTCTTAGAAAGCCTCC
ACCACAACCTTCCCGAAGCCGAGCGCCTTCTGTACTCGTGGGCGGACACA
ATTTTTGCGCCAAAAGTGGTGCTGCGCCAGTATTTGATGGCCTTGGGCTT
GGAAATGACGCTCTTCATCTACCACCTGTGTTACCGCCTGGGCGCGCGCC
TGGTGAATCGGATGACCGTAAAAGGCCGACAAATCTCCGAGACTCGTCGG
AGAATGGCCAAGGCGAAGAACTACTACGAATGGCTGAAATGCGCGGAGCG
GATGGACGAGTTGGAAGGGAAGAACCGGTGGCGGGAGGTTCCGGAGAGCA
CCCTCTACAACCATCGCATGCTCCAAGAGAAGATCAATCAGTTCAACAAC
ATGATGCAAAATGGGGACGTGTTTCAGCTTATGTTCGTCCTCCGGGGGGG
GATCAGCCGGAACCAGTTCGGCCTCTTGAATGAGGGCCTGTACCAGCATG
CTTACTCCGGTACCAAGAAGATCGTGGAGCGATACCTGGAGGGTACGAGA
AACGGTATGATCAACGCTTTCTGCTCTTACCCCGTTGGCCTCGAATAGCT
GGAAACAGAACTCATGGTTGCACTTCCGGCGCCGGTTGCTGAGGCATCCT
CCCCAGGGTCCTCTCCGGGGCCTCGGCGGGGTCCATCATCTCCTCCATGA
TCGGCGTACGCACTGACGACGAACTCTACGCCATGTTCACGGATGGGATC
GCCCGCTTGGACTTCTTCAAACTCTACAAACGGAGGACGAAAGCGGCGGC
GGCGGCGACGGCGTGGTGGTGAAAGCCTTGAATTTCGTGTGCGACGTGAA
CCCCAGCCTCGACAACATTAGCGCGGACGTAAAACTCGCGTTTTTCAACG
AGACACGCCATGCCTTTGGACGCACCGCCTTGTTGCTGAGTGGGGGGGCG
GGGCTCGGATTCTACCATGTCGGTTTCGTCAAGGCTCTCTTTGATCAGGG
TTCTCAATCCCTGCAGCCATGGCCTCGGATCGAGGCACAGGTCCTGGCGT
CCTCTTTGCTATCGACAAAGGCGTGCAACAACTTATCTCGTCGCTCTCCG
AGACCGGCGCCCGGTTGGGGCGCGTGAGGGATGTCGACATCCATCGTCTC
GGCTATTTGGTGGACCGGCTCTTAGAAAGCCTCCACCACAACCTTCCCGA
AGCCGAGCGCCTTCTGTACTCGTGGGCGGACACAATTTTTGCGCCAAAAG
TGGTGCTGCGCCAGTATTTGATGGCCTTGGGCTTGGAAATGACGCTCTTC
ATCTACCACCTGTGTTACCGCCTGGGCGCGCGCCTGGTGAATCGGATGAC
CGTAAAAGGCCGACAAATCTCCGAGACTCGTCGGAGAATGGCCAAGGCGA
AGAACTACTACGAATGGCTGAAATGCGCGGAGCGGATGGACGAGTTGGAA
GGGAAGAACCGGTGGCGGGAGGTTCCGGAGAGCACCCTCTACAACCATCG
CATGCTCCAAGAGAAGATCAATCAGTTCAACAACATGATGCAAAATGGGG
ACGTGTTTCAGCTTATGTTCGTCCTCCGGGGGGGGATCAGCCGGAACCAG
TTCGGCCTCTTGAATGAGGGCCTGTACCAGCATGCTTACTCCGGTACCAA
GAAGATCGTGGAGCGATACCTGGAGGGTACGAGAAACGGTATGATCAACG
CTTTCTGCTCTTACCCCGTTGGCCTCGAATAGCTGGAAACAGAACTCATG
GTTG back to top
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